Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000891A_C01 KCC000891A_c01
(446 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q05107|U639_HSVMG HYPOTHETICAL 23.6 KD PROTEIN gi|483047|pir|... 32 2.0
gb|AAO50817.1| similar to reverse transcriptase [Caenorhabditis ... 32 2.0
ref|ZP_00060171.1| COG1116: ABC-type nitrate/sulfonate/bicarbona... 32 2.0
emb|CAC16087.1| zona pellucida protein 1 [Gallus gallus] 32 2.6
gb|AAP92581.1| Ab2-008 [Rattus norvegicus] 31 3.4
>sp|Q05107|U639_HSVMG HYPOTHETICAL 23.6 KD PROTEIN gi|483047|pir||B48552 minor virion
protein - infectious laryngotracheitis virus
gi|291560|gb|AAB59891.1| unknown protein
gi|765047|gb|AAA64962.1| virion protein
gi|10180775|gb|AAG14263.1|AF243438_78 US10 virion
protein-like protein [Gallid herpesvirus 2]
Length = 213
Score = 32.0 bits (71), Expect = 2.0
Identities = 10/31 (32%), Positives = 18/31 (57%)
Frame = -1
Query: 212 MRDVDNDIRLHSSLDTSFV*CVFWCCMDHSG 120
+R ++ H +DT F ++WCC+ H+G
Sbjct: 107 LRCIERAPLTHEEMDTRFTIMMYWCCLGHAG 137
>gb|AAO50817.1| similar to reverse transcriptase [Caenorhabditis elegans]
[Dictyostelium discoideum]
Length = 786
Score = 32.0 bits (71), Expect = 2.0
Identities = 15/32 (46%), Positives = 20/32 (61%)
Frame = -2
Query: 118 AEWK*ARCEVSADTRHTRCTL*SCMIQKKKKK 23
A+WK A CE D + T CT+ CM+ + KKK
Sbjct: 453 AKWKCACCEAEHDEKVTTCTV--CMVPRLKKK 482
Score = 30.0 bits (66), Expect = 7.5
Identities = 14/32 (43%), Positives = 19/32 (58%)
Frame = -2
Query: 118 AEWK*ARCEVSADTRHTRCTL*SCMIQKKKKK 23
A+WK A CE D + CT+ CM+ + KKK
Sbjct: 486 AKWKCACCEAEHDEKVNTCTV--CMVPRLKKK 515
Score = 30.0 bits (66), Expect = 7.5
Identities = 14/32 (43%), Positives = 19/32 (58%)
Frame = -2
Query: 118 AEWK*ARCEVSADTRHTRCTL*SCMIQKKKKK 23
A+WK A CE D + CT+ CM+ + KKK
Sbjct: 175 AKWKCACCEAEHDEKVNTCTV--CMVPRLKKK 204
>ref|ZP_00060171.1| COG1116: ABC-type nitrate/sulfonate/bicarbonate transport system,
ATPase component [Clostridium thermocellum ATCC 27405]
Length = 268
Score = 32.0 bits (71), Expect = 2.0
Identities = 26/81 (32%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Frame = -3
Query: 243 EEKMILIYGPHAGCGQRYTASLLSGHQFCVMCFLVLHGPFGLRNGNERGVKCQ------- 85
E + + I GP +GCG+ SLL+G F +++L G G ERGV Q
Sbjct: 32 EGEFVSIIGP-SGCGKSTLLSLLTGLNFPTDGYILLDGKQIQGTGTERGVVFQHYSLFPW 90
Query: 84 LTRGIHAVHCKAV*FKKKKKK 22
+T + + +KKK KK
Sbjct: 91 MTARKNLIFGLKQVYKKKSKK 111
>emb|CAC16087.1| zona pellucida protein 1 [Gallus gallus]
Length = 934
Score = 31.6 bits (70), Expect = 2.6
Identities = 21/68 (30%), Positives = 26/68 (37%), Gaps = 8/68 (11%)
Frame = -3
Query: 378 RARACLYR*LVVVPASNEGLHVRVGPL--------LSGARAAASAPHCVPTTIEEKMILI 223
RA C Y V EG V V P L R A++ P C PT + +L
Sbjct: 611 RATPCYYGNTATVQCLPEGHFVLVVPRGLSAQPYNLDSVRLASTQPRCQPTQTTDAFVLF 670
Query: 222 YGPHAGCG 199
+ P CG
Sbjct: 671 HFPVTQCG 678
>gb|AAP92581.1| Ab2-008 [Rattus norvegicus]
Length = 1683
Score = 31.2 bits (69), Expect = 3.4
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -3
Query: 270 APHCVPTTIEEKMILIYGPHAGCGQRYTASLLSGHQFCVM 151
AP CVP+ +L+YG C Q + + +FC M
Sbjct: 29 APTCVPSLFHNDRLLVYGFIPHCTQASLCAFIQEKEFCTM 68
