Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000881A_C01 KCC000881A_c01
(1381 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD55575.1|AF110793_1 CFO ATP synthase subunit II precursor [... 159 1e-37
gb|AAO72579.1| H+-transporting ATP synthase chain 9-like protein... 57 3e-18
prf||1917214A CF0 ATP synthase:SUBUNIT=9 60 2e-16
sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplast precurso... 59 7e-16
ref|NP_194953.1| H+-transporting ATP synthase chain 9 - like pro... 55 1e-14
>gb|AAD55575.1|AF110793_1 CFO ATP synthase subunit II precursor [Volvox carteri f.
nagariensis]
Length = 210
Score = 159 bits (401), Expect = 1e-37
Identities = 102/202 (50%), Positives = 124/202 (60%), Gaps = 2/202 (0%)
Frame = +2
Query: 80 RSSALPSRPRRAPWRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMPAGRRGRQ--DF 253
R++A P+ R P RLVVRA A+KP QQLAQL KPALSA+VANAL+AMPA + DF
Sbjct: 14 RAAAKPAAAR--PMRLVVRAQAEKPSQQLAQLVKPALSAVVANALLAMPAAAEAGKIFDF 71
Query: 254 RLQPDPGPSWPASSCC*WCSWRRPGSPPSARCWMSAITSSXXXXXP*RTTPATLTSWCWR 433
L P + P + + +
Sbjct: 72 NLTL---PVMAGEFLLLMVFLEKAWFTPVGKVLDERDNLIRSKLGAVKDNTGDVDKLVLE 128
Query: 434 RRPSVKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSL 613
+K+AR +VSA IN++K AKQSELDK YNEAKAKITAEV+S+IAGLE+ESA ML++L
Sbjct: 129 AEAILKAARGEVSASINSQKNAKQSELDKAYNEAKAKITAEVDSAIAGLEKESAGMLQTL 188
Query: 614 DAQVDKISAEVLKRVLPEGVRV 679
DAQVDKISAEVLKRVLPEGV+V
Sbjct: 189 DAQVDKISAEVLKRVLPEGVKV 210
Score = 114 bits (285), Expect = 4e-24
Identities = 77/138 (55%), Positives = 81/138 (57%), Gaps = 6/138 (4%)
Frame = +1
Query: 49 MASLLARPQQAVVRAA-KPAAARPLAPGGPRFGSEAPAA-----AGPAGQARSVGHCCQR 210
MASLLARPQQA RAA KPAAARP+ R +E P+ PA A
Sbjct: 1 MASLLARPQQAFARAAAKPAAARPMRLV-VRAQAEKPSQQLAQLVKPALSAVVANALLAM 59
Query: 211 PDGYACWPPRPARFSTST*PWPVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIXXXXXX 390
P + PVMAGEFLLLMVFLEK WFTPVGKVLDERDNLI
Sbjct: 60 PAA-----AEAGKIFDFNLTLPVMAGEFLLLMVFLEKAWFTPVGKVLDERDNLIRSKLGA 114
Query: 391 VKDNTGDVDKLVLEAETI 444
VKDNTGDVDKLVLEAE I
Sbjct: 115 VKDNTGDVDKLVLEAEAI 132
>gb|AAO72579.1| H+-transporting ATP synthase chain 9-like protein [Oryza sativa
(japonica cultivar-group)]
Length = 211
Score = 57.4 bits (137), Expect(4) = 3e-18
Identities = 25/73 (34%), Positives = 48/73 (65%)
Frame = +2
Query: 446 VKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDAQV 625
+K+AR++++A +N K EL+ +E + ++ AE+ ++A LE + +K+LDAQ+
Sbjct: 137 LKAARAEIAAALNKMKKETTQELEAKLDEGRRRVEAELVEALANLEAQKEEAVKALDAQI 196
Query: 626 DKISAEVLKRVLP 664
+S E++K+VLP
Sbjct: 197 ASLSDEIVKKVLP 209
Score = 52.8 bits (125), Expect(4) = 3e-18
Identities = 27/57 (47%), Positives = 38/57 (66%)
Frame = +1
Query: 274 PVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIXXXXXXVKDNTGDVDKLVLEAETI 444
P++A EFLLLMV L+K +FTP+GK +DERD I VKD + +V +L +A +
Sbjct: 80 PLIATEFLLLMVALDKLYFTPLGKFMDERDAKIRAELGGVKDASEEVRQLEEQAAAV 136
Score = 23.9 bits (50), Expect(4) = 3e-18
Identities = 20/58 (34%), Positives = 29/58 (49%), Gaps = 9/58 (15%)
Frame = +2
Query: 83 SSALPSRPRRAPWRLVVRASA---------QKPQQQLAQLAKPALSAIVANALMAMPA 229
++A PRRAP VV +S+ Q+P++ L QL +A VA A +PA
Sbjct: 8 ATATSCSPRRAP---VVASSSVQPPRRQQQQQPRRGLKQLPGLVATAAVAVAAAPLPA 62
Score = 20.8 bits (42), Expect(4) = 3e-18
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = +3
Query: 237 EAGKIFDFNLTL 272
E +FDFNLTL
Sbjct: 68 EKAALFDFNLTL 79
>prf||1917214A CF0 ATP synthase:SUBUNIT=9
Length = 222
Score = 60.5 bits (145), Expect(3) = 2e-16
Identities = 25/73 (34%), Positives = 50/73 (68%)
Frame = +2
Query: 446 VKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDAQV 625
+++AR+++SA +NT+ K+ E++ E + KI E++ ++ LEQ+ +KSLD+Q+
Sbjct: 148 MRAARAEISAALNTQLKMKKEEVEAKLAEGRKKIEVELQEALGSLEQQKEDTIKSLDSQI 207
Query: 626 DKISAEVLKRVLP 664
+S +++K+VLP
Sbjct: 208 SALSDDIVKKVLP 220
Score = 47.4 bits (111), Expect(3) = 2e-16
Identities = 25/66 (37%), Positives = 38/66 (56%)
Frame = +1
Query: 274 PVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIXXXXXXVKDNTGDVDKLVLEAETIREE 453
P++ EFL LM L+K ++TP+G +D+RD I VKD + +V +L +A +
Sbjct: 91 PIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQLEEQANAVM-- 148
Query: 454 RAQRRE 471
RA R E
Sbjct: 149 RAARAE 154
Score = 21.2 bits (43), Expect(3) = 2e-16
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = +3
Query: 237 EAGKIFDFNLTL 272
E +FDFNLTL
Sbjct: 79 EKASLFDFNLTL 90
>sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplast precursor (Subunit II)
gi|479533|pir||S34473 H+-transporting two-sector ATPase
(EC 3.6.3.14) chain 9 - spinach
gi|394755|emb|CAA50520.1| CF(o)II ATP synthase subunit 9
[Spinacia oleracea]
Length = 222
Score = 58.5 bits (140), Expect(3) = 7e-16
Identities = 25/73 (34%), Positives = 48/73 (65%)
Frame = +2
Query: 446 VKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDAQV 625
+++AR+++SA +N K Q E++ E + KI E++ ++ LEQ+ +KSLD+Q+
Sbjct: 148 MRAARAEISAALNKMKKETQLEVEAKLAEGRKKIEVELQEALGSLEQQKEDTIKSLDSQI 207
Query: 626 DKISAEVLKRVLP 664
+S +++K+VLP
Sbjct: 208 SALSDDIVKKVLP 220
Score = 47.4 bits (111), Expect(3) = 7e-16
Identities = 25/66 (37%), Positives = 38/66 (56%)
Frame = +1
Query: 274 PVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIXXXXXXVKDNTGDVDKLVLEAETIREE 453
P++ EFL LM L+K ++TP+G +D+RD I VKD + +V +L +A +
Sbjct: 91 PIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQLEEQANAVM-- 148
Query: 454 RAQRRE 471
RA R E
Sbjct: 149 RAARAE 154
Score = 21.2 bits (43), Expect(3) = 7e-16
Identities = 8/12 (66%), Positives = 9/12 (74%)
Frame = +3
Query: 237 EAGKIFDFNLTL 272
E +FDFNLTL
Sbjct: 79 EKASLFDFNLTL 90
>ref|NP_194953.1| H+-transporting ATP synthase chain 9 - like protein [Arabidopsis
thaliana] gi|7484996|pir||T05402 H+-transporting
two-sector ATPase (EC 3.6.3.14) chain 9 - Arabidopsis
thaliana gi|2864617|emb|CAA16964.1| H+-transporting ATP
synthase chain9 - like protein [Arabidopsis thaliana]
gi|5730141|emb|CAB52473.1| ATP synthase beta chain
precursor (subunit II) [Arabidopsis thaliana]
gi|7270130|emb|CAB79944.1| H+-transporting ATP synthase
chain 9-like protein [Arabidopsis thaliana]
gi|16604406|gb|AAL24209.1| AT4g32260/F10M6_100
[Arabidopsis thaliana] gi|21554175|gb|AAM63254.1|
H+-transporting ATP synthase chain 9-like protein
[Arabidopsis thaliana]
Length = 219
Score = 55.1 bits (131), Expect(3) = 1e-14
Identities = 22/73 (30%), Positives = 49/73 (66%)
Frame = +2
Query: 446 VKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDAQV 625
+++AR++++A +N K Q E+++ E + K+ E++ ++A LE + +K+LD+Q+
Sbjct: 146 MRAARAEIAAALNKMKKETQVEVEEKLAEGRKKVEEELKEALASLESQKEETIKALDSQI 205
Query: 626 DKISAEVLKRVLP 664
+S +++K+VLP
Sbjct: 206 AALSEDIVKKVLP 218
Score = 45.1 bits (105), Expect(3) = 1e-14
Identities = 24/66 (36%), Positives = 38/66 (57%)
Frame = +1
Query: 274 PVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIXXXXXXVKDNTGDVDKLVLEAETIREE 453
P++ EFL LM L+K +++P+G +D+RD I VKD + +V +L +A +
Sbjct: 89 PIIVVEFLFLMFALDKVYYSPLGNFMDQRDASIKEKLASVKDTSTEVKELDEQAAAVM-- 146
Query: 454 RAQRRE 471
RA R E
Sbjct: 147 RAARAE 152
Score = 22.7 bits (47), Expect(3) = 1e-14
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 231 AAEAGKIFDFNLTL 272
A E ++FDFNLTL
Sbjct: 75 AMEKAQLFDFNLTL 88
