>KCC000881A_C01 KCC000881A_c01
CACCACCACCTAGTGACAGCAGCCCTGGCAGACCTACCAATAGGAAAAATGGCCTCTCTG
CTCGCTCGTCCTCAGCAGGCGGTCGTCCGCGCTGCCAAGCCGGCCGCGGCGCGCCCCCTG
GCGCCTGGTGGTCCGCGCTTCGGCTCAGAAGCCCCAGCAGCAGCTGGCCCAGCTGGCCAA
GCCCGCTCTGTCGGCCATTGTTGCCAACGCCCTGATGGCTATGCCTGCTGGCCGCCGAGG
CCGGCAAGATTTTCGACTTCAACCTGACCCTGGCCCGTCATGGCCGGCGAGTTCCTGCTG
CTGATGGTGTTCCTGGAGAAGACCTGGTTCACCCCCGTCGGCAAGGTGCTGGATGAGCGC
GATAACCTCATCxxxxxxxxxxxxxxxxCCGTGAAGGACAACACCGGCGACGTTGACAAG
CTGGTGCTGGAGGCGGAGACCATCCGTGAAGAGCGCGCGCAGCGACGTGAGCGCCATGAT
CAACACCAAGAAGGCTGCCAAGCAGTCGGAGCTGGACAAGACCTACAACGAGGCCAAGGC
TAAGATTACCGCCGAGGTGGAGTCCTCGATCGCCGGTCTGGAGCAGGAGTCGGCCTCCAT
GCTGAAGTCGCTGGACGCCCAGGTTGACAAGATCAGCGCTGAGGTCCTGAAGCGCGTGCT
GCCCGAGGGCGTGCGCGTGTAAGCTCCGCGCTTGCGCGTGGTTATCCTTGCACCTGGGGG
TCAGTCGCGATTGCGCGTTTGTTCGCTCGGGCCTTGTGCTCGCCGCGGCGCACGCGCTCT
CGCCCTGTATGCATAATTGCATGTATGCAGAAGGATTTCTTGGAGCGGACTGGAGCTTGG
CGTTGGGCTAGCAGCGGCTGAGGCGATTGCTGGCGCGGGTTGGTGATGTGGGTGGAGCCC
CGGCGCTACTGCCTATTGCGCGGTGGGGTCTCCGGGGTTTTGGAAAAGGTTGTGATATGA
GCCAGCATAACAGCTGGGTGCACCGGCGGGGCAAATTTTGGCGCTTGCCCCCGCACAGCC
GGGTTTTGCACGGGAGGACACGGGAGTGTGCACCTCGAGAGTGTGAGCGGTGACTAACTG
GGTCTGCTCTGGAGTGTGGGGCTCTCTATAAGCAGAGAAGAACACGAATTCGTTCAGATA
GATTTATTGGGCCATTTGGGTCCTCTGATTATTGCGGCGGCAGGAGGGGGTTGCGAAGGT
GGACAGTGCGCACGCCTGGGCGCTCCCGGCTTTGCCAATGTAAACAAACACGGAGATTGA
AAAACAAAAAAACAAAAAACAAACACATAAACACAAAAAAAAACAAGAAAAAAAAACTCC
GGGGGGGCCGGTCCCAATCGCCCAAATGAGTGATAAGCCCCCGGGCCGGTACAAATCGTA
G

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000881A_C01 KCC000881A_c01
         (1381 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAD55575.1|AF110793_1 CFO ATP synthase subunit II precursor [...   159  1e-37
gb|AAO72579.1| H+-transporting ATP synthase chain 9-like protein...    57  3e-18
prf||1917214A CF0 ATP synthase:SUBUNIT=9                               60  2e-16
sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplast precurso...    59  7e-16
ref|NP_194953.1| H+-transporting ATP synthase chain 9 - like pro...    55  1e-14

>gb|AAD55575.1|AF110793_1 CFO ATP synthase subunit II precursor [Volvox carteri f.
           nagariensis]
          Length = 210

 Score =  159 bits (401), Expect = 1e-37
 Identities = 102/202 (50%), Positives = 124/202 (60%), Gaps = 2/202 (0%)
 Frame = +2

Query: 80  RSSALPSRPRRAPWRLVVRASAQKPQQQLAQLAKPALSAIVANALMAMPAGRRGRQ--DF 253
           R++A P+  R  P RLVVRA A+KP QQLAQL KPALSA+VANAL+AMPA     +  DF
Sbjct: 14  RAAAKPAAAR--PMRLVVRAQAEKPSQQLAQLVKPALSAVVANALLAMPAAAEAGKIFDF 71

Query: 254 RLQPDPGPSWPASSCC*WCSWRRPGSPPSARCWMSAITSSXXXXXP*RTTPATLTSWCWR 433
            L     P              +    P  +                +     +      
Sbjct: 72  NLTL---PVMAGEFLLLMVFLEKAWFTPVGKVLDERDNLIRSKLGAVKDNTGDVDKLVLE 128

Query: 434 RRPSVKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSL 613
               +K+AR +VSA IN++K AKQSELDK YNEAKAKITAEV+S+IAGLE+ESA ML++L
Sbjct: 129 AEAILKAARGEVSASINSQKNAKQSELDKAYNEAKAKITAEVDSAIAGLEKESAGMLQTL 188

Query: 614 DAQVDKISAEVLKRVLPEGVRV 679
           DAQVDKISAEVLKRVLPEGV+V
Sbjct: 189 DAQVDKISAEVLKRVLPEGVKV 210

 Score =  114 bits (285), Expect = 4e-24
 Identities = 77/138 (55%), Positives = 81/138 (57%), Gaps = 6/138 (4%)
 Frame = +1

Query: 49  MASLLARPQQAVVRAA-KPAAARPLAPGGPRFGSEAPAA-----AGPAGQARSVGHCCQR 210
           MASLLARPQQA  RAA KPAAARP+     R  +E P+        PA  A         
Sbjct: 1   MASLLARPQQAFARAAAKPAAARPMRLV-VRAQAEKPSQQLAQLVKPALSAVVANALLAM 59

Query: 211 PDGYACWPPRPARFSTST*PWPVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIXXXXXX 390
           P           +        PVMAGEFLLLMVFLEK WFTPVGKVLDERDNLI      
Sbjct: 60  PAA-----AEAGKIFDFNLTLPVMAGEFLLLMVFLEKAWFTPVGKVLDERDNLIRSKLGA 114

Query: 391 VKDNTGDVDKLVLEAETI 444
           VKDNTGDVDKLVLEAE I
Sbjct: 115 VKDNTGDVDKLVLEAEAI 132

>gb|AAO72579.1| H+-transporting ATP synthase chain 9-like protein [Oryza sativa
           (japonica cultivar-group)]
          Length = 211

 Score = 57.4 bits (137), Expect(4) = 3e-18
 Identities = 25/73 (34%), Positives = 48/73 (65%)
 Frame = +2

Query: 446 VKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDAQV 625
           +K+AR++++A +N  K     EL+   +E + ++ AE+  ++A LE +    +K+LDAQ+
Sbjct: 137 LKAARAEIAAALNKMKKETTQELEAKLDEGRRRVEAELVEALANLEAQKEEAVKALDAQI 196

Query: 626 DKISAEVLKRVLP 664
             +S E++K+VLP
Sbjct: 197 ASLSDEIVKKVLP 209

 Score = 52.8 bits (125), Expect(4) = 3e-18
 Identities = 27/57 (47%), Positives = 38/57 (66%)
 Frame = +1

Query: 274 PVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIXXXXXXVKDNTGDVDKLVLEAETI 444
           P++A EFLLLMV L+K +FTP+GK +DERD  I      VKD + +V +L  +A  +
Sbjct: 80  PLIATEFLLLMVALDKLYFTPLGKFMDERDAKIRAELGGVKDASEEVRQLEEQAAAV 136

 Score = 23.9 bits (50), Expect(4) = 3e-18
 Identities = 20/58 (34%), Positives = 29/58 (49%), Gaps = 9/58 (15%)
 Frame = +2

Query: 83  SSALPSRPRRAPWRLVVRASA---------QKPQQQLAQLAKPALSAIVANALMAMPA 229
           ++A    PRRAP   VV +S+         Q+P++ L QL     +A VA A   +PA
Sbjct: 8   ATATSCSPRRAP---VVASSSVQPPRRQQQQQPRRGLKQLPGLVATAAVAVAAAPLPA 62

 Score = 20.8 bits (42), Expect(4) = 3e-18
 Identities = 8/12 (66%), Positives = 9/12 (74%)
 Frame = +3

Query: 237 EAGKIFDFNLTL 272
           E   +FDFNLTL
Sbjct: 68  EKAALFDFNLTL 79

>prf||1917214A CF0 ATP synthase:SUBUNIT=9
          Length = 222

 Score = 60.5 bits (145), Expect(3) = 2e-16
 Identities = 25/73 (34%), Positives = 50/73 (68%)
 Frame = +2

Query: 446 VKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDAQV 625
           +++AR+++SA +NT+   K+ E++    E + KI  E++ ++  LEQ+    +KSLD+Q+
Sbjct: 148 MRAARAEISAALNTQLKMKKEEVEAKLAEGRKKIEVELQEALGSLEQQKEDTIKSLDSQI 207

Query: 626 DKISAEVLKRVLP 664
             +S +++K+VLP
Sbjct: 208 SALSDDIVKKVLP 220

 Score = 47.4 bits (111), Expect(3) = 2e-16
 Identities = 25/66 (37%), Positives = 38/66 (56%)
 Frame = +1

Query: 274 PVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIXXXXXXVKDNTGDVDKLVLEAETIREE 453
           P++  EFL LM  L+K ++TP+G  +D+RD  I      VKD + +V +L  +A  +   
Sbjct: 91  PIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQLEEQANAVM-- 148

Query: 454 RAQRRE 471
           RA R E
Sbjct: 149 RAARAE 154

 Score = 21.2 bits (43), Expect(3) = 2e-16
 Identities = 8/12 (66%), Positives = 9/12 (74%)
 Frame = +3

Query: 237 EAGKIFDFNLTL 272
           E   +FDFNLTL
Sbjct: 79  EKASLFDFNLTL 90

>sp|P31853|ATPX_SPIOL ATP synthase B' chain, chloroplast precursor (Subunit II)
           gi|479533|pir||S34473 H+-transporting two-sector ATPase
           (EC 3.6.3.14) chain 9 - spinach
           gi|394755|emb|CAA50520.1| CF(o)II ATP synthase subunit 9
           [Spinacia oleracea]
          Length = 222

 Score = 58.5 bits (140), Expect(3) = 7e-16
 Identities = 25/73 (34%), Positives = 48/73 (65%)
 Frame = +2

Query: 446 VKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDAQV 625
           +++AR+++SA +N  K   Q E++    E + KI  E++ ++  LEQ+    +KSLD+Q+
Sbjct: 148 MRAARAEISAALNKMKKETQLEVEAKLAEGRKKIEVELQEALGSLEQQKEDTIKSLDSQI 207

Query: 626 DKISAEVLKRVLP 664
             +S +++K+VLP
Sbjct: 208 SALSDDIVKKVLP 220

 Score = 47.4 bits (111), Expect(3) = 7e-16
 Identities = 25/66 (37%), Positives = 38/66 (56%)
 Frame = +1

Query: 274 PVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIXXXXXXVKDNTGDVDKLVLEAETIREE 453
           P++  EFL LM  L+K ++TP+G  +D+RD  I      VKD + +V +L  +A  +   
Sbjct: 91  PIIMAEFLFLMFALDKIYYTPLGDFMDKRDASIKEQLSGVKDTSSEVKQLEEQANAVM-- 148

Query: 454 RAQRRE 471
           RA R E
Sbjct: 149 RAARAE 154

 Score = 21.2 bits (43), Expect(3) = 7e-16
 Identities = 8/12 (66%), Positives = 9/12 (74%)
 Frame = +3

Query: 237 EAGKIFDFNLTL 272
           E   +FDFNLTL
Sbjct: 79  EKASLFDFNLTL 90

>ref|NP_194953.1| H+-transporting ATP synthase chain 9 - like protein [Arabidopsis
           thaliana] gi|7484996|pir||T05402 H+-transporting
           two-sector ATPase (EC 3.6.3.14) chain 9 - Arabidopsis
           thaliana gi|2864617|emb|CAA16964.1| H+-transporting ATP
           synthase chain9 - like protein [Arabidopsis thaliana]
           gi|5730141|emb|CAB52473.1| ATP synthase beta chain
           precursor (subunit II) [Arabidopsis thaliana]
           gi|7270130|emb|CAB79944.1| H+-transporting ATP synthase
           chain 9-like protein [Arabidopsis thaliana]
           gi|16604406|gb|AAL24209.1| AT4g32260/F10M6_100
           [Arabidopsis thaliana] gi|21554175|gb|AAM63254.1|
           H+-transporting ATP synthase chain 9-like protein
           [Arabidopsis thaliana]
          Length = 219

 Score = 55.1 bits (131), Expect(3) = 1e-14
 Identities = 22/73 (30%), Positives = 49/73 (66%)
 Frame = +2

Query: 446 VKSARSDVSAMINTKKAAKQSELDKTYNEAKAKITAEVESSIAGLEQESASMLKSLDAQV 625
           +++AR++++A +N  K   Q E+++   E + K+  E++ ++A LE +    +K+LD+Q+
Sbjct: 146 MRAARAEIAAALNKMKKETQVEVEEKLAEGRKKVEEELKEALASLESQKEETIKALDSQI 205

Query: 626 DKISAEVLKRVLP 664
             +S +++K+VLP
Sbjct: 206 AALSEDIVKKVLP 218

 Score = 45.1 bits (105), Expect(3) = 1e-14
 Identities = 24/66 (36%), Positives = 38/66 (57%)
 Frame = +1

Query: 274 PVMAGEFLLLMVFLEKTWFTPVGKVLDERDNLIXXXXXXVKDNTGDVDKLVLEAETIREE 453
           P++  EFL LM  L+K +++P+G  +D+RD  I      VKD + +V +L  +A  +   
Sbjct: 89  PIIVVEFLFLMFALDKVYYSPLGNFMDQRDASIKEKLASVKDTSTEVKELDEQAAAVM-- 146

Query: 454 RAQRRE 471
           RA R E
Sbjct: 147 RAARAE 152

 Score = 22.7 bits (47), Expect(3) = 1e-14
 Identities = 9/14 (64%), Positives = 11/14 (78%)
 Frame = +3

Query: 231 AAEAGKIFDFNLTL 272
           A E  ++FDFNLTL
Sbjct: 75  AMEKAQLFDFNLTL 88

EST assemble image

clone accession position 1 HC058b05_r AV636335 0 630 2 HC059a02_r AV636398 1 591 3 HC035f03_r AV634613 14 623 4 HC088a03_r AV638565 16 546 5 CM057b12_r AV390441 100 682 6 MX210d04_r BP089593 101 551 7 HC029g06_r AV634141 101 629 8 HC074f07_r AV637559 101 551 9 HC081f11_r AV638082 101 563 10 HC098d03_r AV639358 101 524 11 HC071g10_r AV637335 101 568 12 HC028c01_r AV634020 101 628 13 MX027b05_r BP087168 101 488 14 HC068d01_r AV637074 101 581 15 HC081a03_r AV638034 101 607 16 HC010b12_r AV632600 101 597 17 HC019h06_r AV633359 101 604 18 HC082c02_r AV638122 101 605 19 HC010f01_r AV632630 103 442 20 HC086f07_r AV638457 103 520 21 HC083h08_r AV638253 103 563 22 CM048f08_r AV389147 104 482 23 HC036b06_r AV634659 105 613 24 MX052a06_r BP088115 105 468 25 HC065g12_r AV636901 105 545 26 HC017f12_r AV633179 105 564 27 HC076d04_r AV637697 105 551 28 HC013d03_r AV632845 105 586 29 MX021b07_r BP086948 105 560 30 HC044f12_r AV635308 105 619 31 MX237e03_r BP091354 106 470 32 LC051d03_r AV622571 106 628 33 HC071h07_r AV637343 106 573 34 CM050g02_r AV389779 108 478 35 HC055d07_r AV636120 108 561 36 CM033f11_r AV388441 108 648 37 CM060f02_r AV390797 109 688 38 CM013b09_r AV387095 109 694 39 CM035b12_r AV388721 109 468 40 HC026a07_r AV633846 111 630 41 CM067d04_r AV390904 113 711 42 MX019h05_r BP086905 114 627 43 MX254f09_r BP092472 114 623 44 HC023f10_r AV633663 114 625 45 HC057b01_r AV636254 114 609 46 LCL017h09_r AV626911 115 377 47 HC071g07_r AV637333 116 596 48 HC034d12_r AV634518 116 638 49 CM034c11_r AV388672 116 668 50 HC018b05_r AV633213 116 625 51 HC052a02_r AV635865 116 558 52 MX008c09_r BP086414 117 484 53 HC004f02_r AV632154 119 626 54 MX053e07_r BP088184 119 445 55 HC048d09_r AV635605 119 595 56 HC081h01_r AV638092 121 630 57 HC019c04_r AV633307 121 487 58 CM072f01_r AV391481 122 708 59 HC040e03_r AV634987 122 585 60 HC098g08_r AV639394 123 606 61 HC074c04_r AV637529 129 653 62 HC041g08_r AV635094 130 597 63 MXL065c12_r BP096814 156 553 64 HC087e09_r AV638531 158 632 65 MX241d09_r BP091591 164 693 66 CM001b01_r AV386514 186 756 67 CM038a10_r AV389037 189 592 68 HC044f05_r AV635303 215 357 69 HC022a10_r AV633546 232 751 70 HC081h12_r AV638102 240 674 71 CM062e08_r AV390152 260 890 72 HC088e06_r AV638609 289 719 73 HC003d02_r AV632056 289 813 74 CM059f09_r AV390656 316 910 75 MX037h03_r BP087578 320 765 76 HC099g12_r AV639474 323 746 77 MX028h02_r BP087243 342 737 78 HC045h05_r AV635398 401 785 79 LC085c12_r AV624979 454 907 80 MX007a09_r BP086347 501 976 81 HC012e05_r AV632781 519 1015 82 MXL089a04_r BP098189 619 987 83 MX005b03_r BP086251 697 1093 84 CM024a01_r AV388264 883 1495 85 MX011c03_r BP086549 932 1342

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