Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000872A_C01 KCC000872A_c01
(844 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays] 74 2e-12
gb|AAK70354.1| glutamine synthetase [Aspergillus nidulans] 64 4e-09
ref|NP_819537.1| glutamine synthetase [Coxiella burnetii RSA 493... 63 5e-09
gb|AAM62764.1| glutamine synthetase, putative [Arabidopsis thali... 62 1e-08
ref|NP_175280.1| glutamine synthetase -related [Arabidopsis thal... 62 1e-08
>gb|AAF43497.1|AF134579_1 arabinogalactan protein [Zea mays]
Length = 274
Score = 74.3 bits (181), Expect = 2e-12
Identities = 70/213 (32%), Positives = 85/213 (39%), Gaps = 6/213 (2%)
Frame = +1
Query: 34 SSSCGCRLRTFSTRWPTTTAGWTGCPRRRPPRLRTRSARPTPPS*CPA*PSCSRAATSRT 213
+S+C + STR + + T CP +R +RP+P CS ATS T
Sbjct: 26 TSACSPTATSTSTRTSSASTAPTACPGT------SRGSRPSP---------CSSTATSST 70
Query: 214 AARRRMPTPTR*PCSWQRSRWT-SPCPSCPRPRPPATRRPTAVAACRRARPRVPLLLPCL 390
+A R P T +W S WT SPC SC P P RP A CRR C
Sbjct: 71 SAPGRRPRGTTTSTAWS-SPWTASPCASCREPTPRG--RP---APCRR----------CP 114
Query: 391 SAVPCRATCWPLRPPNGSSSSST*CSTRRARSATPSTKMMR*LKTRQLCWPRWT-----T 555
S P R T R GS S T C ++R T +R L WP + T
Sbjct: 115 SPAPARPTACSSRSTAGSPSGPTPCPSQRRSPGCTGTASRPTTASRTLTWPSSSARSPPT 174
Query: 556 MAALQRRRRATRTSRTRTMPAPALSPAPGRTTT 654
A RR A TS T +M P P G TT
Sbjct: 175 CTAWSARRTAPTTS-TGSMSRPQCPPWEGTATT 206
Score = 41.6 bits (96), Expect = 0.017
Identities = 41/140 (29%), Positives = 53/140 (37%), Gaps = 6/140 (4%)
Frame = -2
Query: 477 SPCRTSGAAAAAAVGRPQR-----PAGSSAWDCRKAGQQQRDTRTGPPT-CRHCSWPPCC 316
SPC ++ ++ +A GR R A SS W + T G P CR C P
Sbjct: 60 SPCSSTATSSTSAPGRRPRGTTTSTAWSSPWTASPCASCREPTPRGRPAPCRRCPSPAPA 119
Query: 315 RRTRTRAAWAGGCPA*SLPGAGSPCRGRHPTAGGGP*SSRPAAGRLGWALRRRRWPSRPR 136
R T + G P+ +PC + + G +SRP A R WPS
Sbjct: 120 RPTACSSRSTAGSPS-----GPTPCPSQRRSPGCTGTASRPTT-----ASRTLTWPSSSA 169
Query: 135 A*TWRPPARTAGPACRRCRP 76
PP TA A RR P
Sbjct: 170 R---SPPTCTAWSA-RRTAP 185
Score = 33.5 bits (75), Expect = 4.5
Identities = 33/118 (27%), Positives = 40/118 (32%), Gaps = 2/118 (1%)
Frame = -2
Query: 366 TRTGPPTCRHCSWPPCCRRTRTRAAWAG--GCPA*SLPGAGSPCRGRHPTAGGGP*SSRP 193
T G PT CS TRT +A CP S SPC ++ P R
Sbjct: 20 TAAGTPTSA-CSPTATSTSTRTSSASTAPTACPGTSRGSRPSPCSSTATSSTSAP--GRR 76
Query: 192 AAGRLGWALRRRRWPSRPRA*TWRPPARTAGPACRRCRPPGAERA*PAAARAAVLSRS 19
G W + P A P R CRRC P R ++R+ S S
Sbjct: 77 PRGTTTSTAWSSPWTASPCASCREPTPRGRPAPCRRCPSPAPARPTACSSRSTAGSPS 134
>gb|AAK70354.1| glutamine synthetase [Aspergillus nidulans]
Length = 345
Score = 63.5 bits (153), Expect = 4e-09
Identities = 31/87 (35%), Positives = 49/87 (55%), Gaps = 4/87 (4%)
Frame = +3
Query: 15 GLNAIEQQLVRLQATHVQHQVAYNDGRLDRLSSPEAS----TFTHAVGSANASVVVPSLT 182
G+ AIE + +L+A HV+H Y +G +RL+ + F++ V S+ +P
Sbjct: 251 GIKAIESYMKKLEARHVEHIAVYGEGNEERLTGRHETGNIDKFSYGVADRGGSIRIPRQV 310
Query: 183 FLQQGGYFTDRRPPSDADPYKVTLLLA 263
GYF DRRP S+ADPY++T ++A
Sbjct: 311 AKDGKGYFEDRRPASNADPYQITGIIA 337
>ref|NP_819537.1| glutamine synthetase [Coxiella burnetii RSA 493]
gi|29541108|gb|AAO90051.1| glutamine synthetase
[Coxiella burnetii RSA 493]
Length = 359
Score = 63.2 bits (152), Expect = 5e-09
Identities = 37/97 (38%), Positives = 49/97 (50%), Gaps = 4/97 (4%)
Frame = +3
Query: 15 GLNAIEQQLVRLQATHVQHQVAYNDGRLDRLSSPEAST----FTHAVGSANASVVVPSLT 182
G AIEQ + RL H H Y G +RL+ + F+ VG+ ASV +PS
Sbjct: 255 GREAIEQAIERLSKRHDAHIAVYGHGLEERLTGKHETAPITQFSSGVGNRGASVRIPSAV 314
Query: 183 FLQQGGYFTDRRPPSDADPYKVTLLLAAITLDIPLPK 293
+ GY DRRP ++ADPY+V +L I LPK
Sbjct: 315 ASRGCGYLEDRRPGANADPYQVAAILLETICGIQLPK 351
>gb|AAM62764.1| glutamine synthetase, putative [Arabidopsis thaliana]
Length = 353
Score = 62.0 bits (149), Expect = 1e-08
Identities = 35/91 (38%), Positives = 52/91 (56%), Gaps = 4/91 (4%)
Frame = +3
Query: 15 GLNAIEQQLVRLQATHVQHQVAYNDGRLDRLS----SPEASTFTHAVGSANASVVVPSLT 182
GL+ I++ + +L+ H QH AY +G RL+ + + +TF+ V ASV V T
Sbjct: 262 GLDLIKEAIKKLEVKHKQHIAAYGEGNERRLTGKHETADINTFSWGVADRGASVRVGRDT 321
Query: 183 FLQQGGYFTDRRPPSDADPYKVTLLLAAITL 275
+ GYF DRRP S+ DPY VT ++A T+
Sbjct: 322 EKEGKGYFEDRRPSSNMDPYLVTSMIAETTI 352
>ref|NP_175280.1| glutamine synthetase -related [Arabidopsis thaliana]
gi|26451067|dbj|BAC42638.1| putative glutamine
synthetase [Arabidopsis thaliana]
gi|30017321|gb|AAP12894.1| At1g48470 [Arabidopsis
thaliana]
Length = 353
Score = 62.0 bits (149), Expect = 1e-08
Identities = 35/91 (38%), Positives = 52/91 (56%), Gaps = 4/91 (4%)
Frame = +3
Query: 15 GLNAIEQQLVRLQATHVQHQVAYNDGRLDRLS----SPEASTFTHAVGSANASVVVPSLT 182
GL+ I++ + +L+ H QH AY +G RL+ + + +TF+ V ASV V T
Sbjct: 262 GLDLIKEAIKKLEVKHKQHIAAYGEGNERRLTGKHETADINTFSWGVADRGASVRVGRDT 321
Query: 183 FLQQGGYFTDRRPPSDADPYKVTLLLAAITL 275
+ GYF DRRP S+ DPY VT ++A T+
Sbjct: 322 EKEGKGYFEDRRPSSNMDPYLVTSMIAETTI 352
