>KCC000871A_C01 KCC000871A_c01
AGGTGTGCTGAGTTTACAAAAAGCACGGAGTGCACGGGAGGATGAATGATTTGAGCCAGT
CACGCCCCGCTCCTCATTCACTCCAGTAGGAGAGCAATGACATGGGGCATTGGGGCCATG
GACCGTATTCATGTGAATGGCGGTACGGCAGTACTACCATGTCAACTCAGTCAGGGTTGA
CTGAACAAATGATGGGCGCGCTGATGACGGCTCGAGCATTGACACCCTTCCGCGACAGAG
TAAGTGATCAGACCGAGAAGCTCTTTACCCAATACGCACATCTGTTGCTCACCGCCATTC
GGTAACAATCCGCTGACACTGCCGTTGGCTACTGCGCCGCTCTACCGGGCCAGTCTAGGG
GAAGGCCACTAGGCCAGTCGTACCGTCTTCAGCCCTGGTCACAGTGTTTACTCCAGCAAT
CAATCGGGTCACACACTCACATGTCATGGGTTGGACGCCGGGCAGCCCGTGTCGCGTACA
TCTGTGAACTCAGGAAT

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000871A_C01 KCC000871A_c01
         (497 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAC80408.1| immunoglobulin heavy chain V-D-J region [Oryctola...    33  2.5
gb|AAM88089.1|AF460718_1 immunoglobulin heavy chain variable reg...    33  2.5
emb|CAC88748.1| immunoglobulin heavy chain variable region [Homo...    32  4.3
gb|AAM60913.1| nucleolar autoantigen-like protein [Arabidopsis t...    32  5.6
ref|NP_566441.1| expressed protein [Arabidopsis thaliana] gi|157...    32  5.6

>gb|AAC80408.1| immunoglobulin heavy chain V-D-J region [Oryctolagus cuniculus]
          Length = 121

 Score = 32.7 bits (73), Expect = 2.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = +3

Query: 309 SADTAVGYCAALPGQSRGRPLGQSYRLQPW 398
           +ADTA  +CA       G P+G+SY   PW
Sbjct: 86  AADTATYFCAREASYGYGYPIGRSYAFDPW 115

>gb|AAM88089.1|AF460718_1 immunoglobulin heavy chain variable region [Homo sapiens]
          Length = 62

 Score = 32.7 bits (73), Expect = 2.5
 Identities = 22/52 (42%), Positives = 30/52 (57%)
 Frame = +3

Query: 207 TARALTPFRDRVSDQTEKLFTQYAHLLLTAIR*QSADTAVGYCAALPGQSRG 362
           TA     F+ RV+   +K  T  A++ L+++R  S DTAV YCA  PG S G
Sbjct: 8   TANYAQKFQGRVTITADKS-TSTAYMELSSLR--SEDTAVYYCARNPGYSSG 56

>emb|CAC88748.1| immunoglobulin heavy chain variable region [Homo sapiens]
          Length = 132

 Score = 32.0 bits (71), Expect = 4.3
 Identities = 24/71 (33%), Positives = 36/71 (49%), Gaps = 5/71 (7%)
 Frame = +3

Query: 207 TARALTPFRDRVSDQTEKLFTQYAHLLLTAIR*QSADTAVGYCAALPGQS-----RGRPL 371
           TA     F+ RV+   ++  T  A++ L+++R  S DTAV YCA+LP +         P 
Sbjct: 57  TANYAQKFQGRVTITADES-TSTAYMELSSLR--SEDTAVYYCASLPWKDIVVVPAASPE 113

Query: 372 GQSYRLQPWSQ 404
             S+   PW Q
Sbjct: 114 ELSHWFDPWGQ 124

>gb|AAM60913.1| nucleolar autoantigen-like protein [Arabidopsis thaliana]
          Length = 307

 Score = 31.6 bits (70), Expect = 5.6
 Identities = 21/88 (23%), Positives = 46/88 (51%), Gaps = 5/88 (5%)
 Frame = +3

Query: 30  VHGRMNDL-----SQSRPAPHSLQ*ESNDMGHWGHGPYSCEWRYGSTTMSTQSGLTEQMM 194
           + GR+N++     ++S+    +LQ E    G   +       ++G    S+Q  L +  +
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 195 GALMTARALTPFRDRVSDQTEKLFTQYA 278
            A +TA+ + P++DR S+ +  +FT+++
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFS 88

>ref|NP_566441.1| expressed protein [Arabidopsis thaliana]
           gi|15795131|dbj|BAB02509.1| nucleolar autoantigen-like
           protein [Arabidopsis thaliana]
           gi|27765042|gb|AAO23642.1| At3g12990 [Arabidopsis
           thaliana]
          Length = 307

 Score = 31.6 bits (70), Expect = 5.6
 Identities = 21/88 (23%), Positives = 46/88 (51%), Gaps = 5/88 (5%)
 Frame = +3

Query: 30  VHGRMNDL-----SQSRPAPHSLQ*ESNDMGHWGHGPYSCEWRYGSTTMSTQSGLTEQMM 194
           + GR+N++     ++S+    +LQ E    G   +       ++G    S+Q  L +  +
Sbjct: 1   MEGRLNNMWRLTVNESKFVESALQSELRVDGRGLYDYRKLTIKFGKEYGSSQVQLGQTHV 60

Query: 195 GALMTARALTPFRDRVSDQTEKLFTQYA 278
            A +TA+ + P++DR S+ +  +FT+++
Sbjct: 61  MAFVTAQLVQPYKDRPSEGSFSIFTEFS 88

EST assemble image

clone accession position 1 LC094b02_r AV625523 1 315 2 CL80d04_r AV397319 42 538

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