Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000866A_C01 KCC000866A_c01
(319 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAA92923.1| unnamed protein product [Oryza sativa (japonica ... 38 0.044
dbj|BAC84201.1| hypothetical protein [Oryza sativa (japonica cul... 36 0.13
ref|NP_598793.1| homeo box B2 [Mus musculus] gi|18044439|gb|AAH1... 36 0.17
ref|ZP_00048218.1| COG5349: Uncharacterized protein conserved in... 35 0.22
pir||T50848 hypothetical protein 110K5.12 [imported] - sorghum ... 35 0.37
>dbj|BAA92923.1| unnamed protein product [Oryza sativa (japonica cultivar-group)]
Length = 584
Score = 37.7 bits (86), Expect = 0.044
Identities = 30/104 (28%), Positives = 44/104 (41%), Gaps = 2/104 (1%)
Frame = -3
Query: 308 PSSSSRVLGVRRAERRSGPSWCTPLGAAVPSQRCCAESRSWRLAAIRPPASTPSVPTQSY 129
P ++ VL RR RR GAA P QR + A RPP+ PS+
Sbjct: 225 PQPATSVLCERRRRRRRREELLRADGAAGPEQRAAHDGEGSPSPASRPPSLAPSL-FLLL 283
Query: 128 PYYAKAEKGLAKAKN--SLRGGLSVGILRCCSVVSVKESSKLLR 3
P+ + + N S G S G++ CC+ K+++K R
Sbjct: 284 PWSTEEINPIKAEDNVWSSCDGCSTGVVSCCAFWGFKKTTKRKR 327
>dbj|BAC84201.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 256
Score = 36.2 bits (82), Expect = 0.13
Identities = 17/40 (42%), Positives = 20/40 (49%)
Frame = +2
Query: 146 RWAWTRAGV*QRGARTATRHSSAVRGQQRREGCTSWGLTG 265
RW W R RG R R +A RG +RR T W +TG
Sbjct: 180 RWRWRR----WRGGRRRWRRRTAARGARRRRAVTGWAVTG 215
>ref|NP_598793.1| homeo box B2 [Mus musculus] gi|18044439|gb|AAH19414.1| Homeo box B2
[Mus musculus]
Length = 161
Score = 35.8 bits (81), Expect = 0.17
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 5/60 (8%)
Frame = -1
Query: 298 RAGCWESDELSAGQAPAGAPLSALLSPHSAAVPSRGPGASLLYA-----RPRPRPACPHR 134
R C+ E A Q P GAP SAL + +V + PG ++L A P P ACP R
Sbjct: 46 REACFHPAE--AAQGPRGAPPSALPATTLESVGASSPGCTMLRAGGRQSEPLPEDACPER 103
>ref|ZP_00048218.1| COG5349: Uncharacterized protein conserved in bacteria
[Magnetospirillum magnetotacticum]
Length = 168
Score = 35.4 bits (80), Expect = 0.22
Identities = 18/41 (43%), Positives = 24/41 (57%)
Frame = -3
Query: 269 ERRSGPSWCTPLGAAVPSQRCCAESRSWRLAAIRPPASTPS 147
E R P + T AAVP+ RC A S++ +AI PPA P+
Sbjct: 19 EGRREPPFFTCAAAAVPAYRCRARSKAVNRSAIHPPAPIPT 59
>pir||T50848 hypothetical protein 110K5.12 [imported] - sorghum (fragment)
gi|5410348|gb|AAD43042.1|AF124045_1 unknown [Sorghum
bicolor]
Length = 345
Score = 34.7 bits (78), Expect = 0.37
Identities = 25/67 (37%), Positives = 31/67 (45%)
Frame = -1
Query: 280 SDELSAGQAPAGAPLSALLSPHSAAVPSRGPGASLLYARPRPRPACPHRAIPIMQRQRRA 101
SD Q AGA S + +AA RG G S A PRPR P +P+ +RRA
Sbjct: 24 SDHHQLSQELAGAVRSVVQRAMAAAPTVRGYGPSSSVALPRPRSRVPASLVPV--ARRRA 81
Query: 100 *QKPRIR 80
R+R
Sbjct: 82 PSSVRLR 88
