KCC000859A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC000859A_C01 KCC000859A_c01
cgcgggcCACAAAACCAAGTCATAGTAAAGCACTACGTTCGGCTCCAGTCCTAGCGAAAG
CCTAGCCCTACCTCTGTCACTCAAACATGCAACTAGGCGCCCGCAACGGAAACTTGCTAA
CGCAGGGCAGAGAAAGGCAAGAGCAACGATGCTCCCATTTACCGATGCAACTGGTGGCGA
ACCAGGCTCATCGAGCTCCTGGTTTGACGCCTCGCCGCGCGGACACAAGCCCTCGCCTGC
AAGCAGCAGAAATCACTTGTCGGCAGGCGGTGACGCCACAGGCTGCTGGCGCCAAAGCTG
TAGGAGCAATTGCTGCAAGCGCACTGAAATCGTTTGGCTTCGCGCATGACTTTGACCAGA
AGTACACGCTAGGTCGGGCTATCGGCGCTGGAACCTTCGGAACAGTGCACCTGGCCACTG
ACAAGGCCACGGGGCAGGAGGTGGCAGTCAAGGTGATCACCAAGCGGGTCATGGGCGGAT
ACCTGGAGGG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000859A_C01 KCC000859A_c01
(490 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_179379.1| Ca2+-dependent ser/thr protein kinase -related ... 58 7e-08
gb|AAC78558.1| protein kinase CPK1 [Solanum tuberosum] 55 3e-07
gb|AAL30819.1|AF435451_1 calcium/calmodulin-dependent protein ki... 54 8e-07
pir||T02784 calcium-dependent protein kinase (EC 2.7.1.-) - maiz... 54 1e-06
ref|NP_195331.1| Calcium-dependent serine/threonine protein kina... 54 1e-06
>ref|NP_179379.1| Ca2+-dependent ser/thr protein kinase -related [Arabidopsis
thaliana] gi|7446450|pir||T00835 calcium-dependent
protein kinase homolog At2g17890 - Arabidopsis thaliana
gi|2708745|gb|AAD03569.1| putative Ca2+-dependent
ser/thr protein kinase [Arabidopsis thaliana]
Length = 571
Score = 57.8 bits (138), Expect = 7e-08
Identities = 26/47 (55%), Positives = 33/47 (69%)
Frame = +3
Query: 333 FGFAHDFDQKYTLGRAIGAGTFGTVHLATDKATGQEVAVKVITKRVM 473
FG+A DFD +YT+G+ +G G FG ++ATDK TG VAVK I K M
Sbjct: 98 FGYAKDFDHRYTIGKLLGHGQFGYTYVATDKKTGDRVAVKKIDKAKM 144
>gb|AAC78558.1| protein kinase CPK1 [Solanum tuberosum]
Length = 564
Score = 55.5 bits (132), Expect = 3e-07
Identities = 25/57 (43%), Positives = 36/57 (62%)
Frame = +3
Query: 303 GAIAASALKSFGFAHDFDQKYTLGRAIGAGTFGTVHLATDKATGQEVAVKVITKRVM 473
G I FG+ DF+++YT+G+ +G G FG ++ATDK++G VAVK I K M
Sbjct: 91 GVIPCGKRTDFGYDKDFEKRYTIGKLLGHGQFGYTYVATDKSSGDRVAVKRIEKNKM 147
>gb|AAL30819.1|AF435451_1 calcium/calmodulin-dependent protein kinase CaMK2 [Nicotiana
tabacum]
Length = 572
Score = 54.3 bits (129), Expect = 8e-07
Identities = 25/57 (43%), Positives = 35/57 (60%)
Frame = +3
Query: 303 GAIAASALKSFGFAHDFDQKYTLGRAIGAGTFGTVHLATDKATGQEVAVKVITKRVM 473
G IA FG+ DFD+++T+G+ +G G FG ++AT K+ G VAVK I K M
Sbjct: 90 GVIACGKRTDFGYDKDFDKRFTIGKLLGHGQFGYTYVATHKSNGDRVAVKRIEKNKM 146
>pir||T02784 calcium-dependent protein kinase (EC 2.7.1.-) - maize (strain
W64A) gi|3320104|emb|CAA07481.1| calcium-dependent
protein kinase [Zea mays]
Length = 639
Score = 53.9 bits (128), Expect = 1e-06
Identities = 27/67 (40%), Positives = 38/67 (56%)
Frame = +3
Query: 276 PQAAGAKAVGAIAASALKSFGFAHDFDQKYTLGRAIGAGTFGTVHLATDKATGQEVAVKV 455
PQ + G + S L+ + KY+LGR +G G FGT HL ++ATG+E+A K
Sbjct: 126 PQVKRVSSAGLLLGSVLRRK--TENLKDKYSLGRRLGQGQFGTTHLCVERATGKELACKS 183
Query: 456 ITKRVMG 476
I KR +G
Sbjct: 184 ILKRKLG 190
>ref|NP_195331.1| Calcium-dependent serine/threonine protein kinase [Arabidopsis
thaliana] gi|7434367|pir||T05500 calcium-dependent
protein kinase homolog T19K4.200 - Arabidopsis thaliana
gi|3036811|emb|CAA18501.1| Calcium-dependent
serine/threonine protein kinase [Arabidopsis thaliana]
gi|7270559|emb|CAB81516.1| Calcium-dependent
serine/threonine protein kinase [Arabidopsis thaliana]
Length = 536
Score = 53.5 bits (127), Expect = 1e-06
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = +3
Query: 303 GAIAASALKSFGFAHDFDQKYTLGRAIGAGTFGTVHLATDKATGQEVAVKVITKRVM 473
G I FG+A DFD +YT+G+ +G G FG ++ATD G VAVK I K M
Sbjct: 51 GGIPYGKRIDFGYAKDFDNRYTIGKLLGHGQFGFTYVATDNNNGNRVAVKRIDKAKM 107
EST assemble image
|
|
|
|
clone |
accession |
position |
1 |
CL78h03_r |
AV397205 |
1 |
484 |
2 |
CL80h06_r |
AV397345 |
5 |
490 |
|
Chlamydomonas reinhardtii
Kazusa DNA Research Institute