KCC000859A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000859A_C01 KCC000859A_c01
cgcgggcCACAAAACCAAGTCATAGTAAAGCACTACGTTCGGCTCCAGTCCTAGCGAAAG
CCTAGCCCTACCTCTGTCACTCAAACATGCAACTAGGCGCCCGCAACGGAAACTTGCTAA
CGCAGGGCAGAGAAAGGCAAGAGCAACGATGCTCCCATTTACCGATGCAACTGGTGGCGA
ACCAGGCTCATCGAGCTCCTGGTTTGACGCCTCGCCGCGCGGACACAAGCCCTCGCCTGC
AAGCAGCAGAAATCACTTGTCGGCAGGCGGTGACGCCACAGGCTGCTGGCGCCAAAGCTG
TAGGAGCAATTGCTGCAAGCGCACTGAAATCGTTTGGCTTCGCGCATGACTTTGACCAGA
AGTACACGCTAGGTCGGGCTATCGGCGCTGGAACCTTCGGAACAGTGCACCTGGCCACTG
ACAAGGCCACGGGGCAGGAGGTGGCAGTCAAGGTGATCACCAAGCGGGTCATGGGCGGAT
ACCTGGAGGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000859A_C01 KCC000859A_c01
         (490 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_179379.1| Ca2+-dependent ser/thr protein kinase -related ...    58  7e-08
gb|AAC78558.1| protein kinase CPK1 [Solanum tuberosum]                 55  3e-07
gb|AAL30819.1|AF435451_1 calcium/calmodulin-dependent protein ki...    54  8e-07
pir||T02784 calcium-dependent protein kinase (EC 2.7.1.-) - maiz...    54  1e-06
ref|NP_195331.1| Calcium-dependent serine/threonine protein kina...    54  1e-06

>ref|NP_179379.1| Ca2+-dependent ser/thr protein kinase -related [Arabidopsis
           thaliana] gi|7446450|pir||T00835 calcium-dependent
           protein kinase homolog At2g17890 - Arabidopsis thaliana
           gi|2708745|gb|AAD03569.1| putative Ca2+-dependent
           ser/thr protein kinase [Arabidopsis thaliana]
          Length = 571

 Score = 57.8 bits (138), Expect = 7e-08
 Identities = 26/47 (55%), Positives = 33/47 (69%)
 Frame = +3

Query: 333 FGFAHDFDQKYTLGRAIGAGTFGTVHLATDKATGQEVAVKVITKRVM 473
           FG+A DFD +YT+G+ +G G FG  ++ATDK TG  VAVK I K  M
Sbjct: 98  FGYAKDFDHRYTIGKLLGHGQFGYTYVATDKKTGDRVAVKKIDKAKM 144

>gb|AAC78558.1| protein kinase CPK1 [Solanum tuberosum]
          Length = 564

 Score = 55.5 bits (132), Expect = 3e-07
 Identities = 25/57 (43%), Positives = 36/57 (62%)
 Frame = +3

Query: 303 GAIAASALKSFGFAHDFDQKYTLGRAIGAGTFGTVHLATDKATGQEVAVKVITKRVM 473
           G I       FG+  DF+++YT+G+ +G G FG  ++ATDK++G  VAVK I K  M
Sbjct: 91  GVIPCGKRTDFGYDKDFEKRYTIGKLLGHGQFGYTYVATDKSSGDRVAVKRIEKNKM 147

>gb|AAL30819.1|AF435451_1 calcium/calmodulin-dependent protein kinase CaMK2 [Nicotiana
           tabacum]
          Length = 572

 Score = 54.3 bits (129), Expect = 8e-07
 Identities = 25/57 (43%), Positives = 35/57 (60%)
 Frame = +3

Query: 303 GAIAASALKSFGFAHDFDQKYTLGRAIGAGTFGTVHLATDKATGQEVAVKVITKRVM 473
           G IA      FG+  DFD+++T+G+ +G G FG  ++AT K+ G  VAVK I K  M
Sbjct: 90  GVIACGKRTDFGYDKDFDKRFTIGKLLGHGQFGYTYVATHKSNGDRVAVKRIEKNKM 146

>pir||T02784 calcium-dependent protein kinase (EC 2.7.1.-) - maize  (strain
           W64A) gi|3320104|emb|CAA07481.1| calcium-dependent
           protein kinase [Zea mays]
          Length = 639

 Score = 53.9 bits (128), Expect = 1e-06
 Identities = 27/67 (40%), Positives = 38/67 (56%)
 Frame = +3

Query: 276 PQAAGAKAVGAIAASALKSFGFAHDFDQKYTLGRAIGAGTFGTVHLATDKATGQEVAVKV 455
           PQ     + G +  S L+      +   KY+LGR +G G FGT HL  ++ATG+E+A K 
Sbjct: 126 PQVKRVSSAGLLLGSVLRRK--TENLKDKYSLGRRLGQGQFGTTHLCVERATGKELACKS 183

Query: 456 ITKRVMG 476
           I KR +G
Sbjct: 184 ILKRKLG 190

>ref|NP_195331.1| Calcium-dependent serine/threonine protein kinase [Arabidopsis
           thaliana] gi|7434367|pir||T05500 calcium-dependent
           protein kinase homolog T19K4.200 - Arabidopsis thaliana
           gi|3036811|emb|CAA18501.1| Calcium-dependent
           serine/threonine protein kinase [Arabidopsis thaliana]
           gi|7270559|emb|CAB81516.1| Calcium-dependent
           serine/threonine protein kinase [Arabidopsis thaliana]
          Length = 536

 Score = 53.5 bits (127), Expect = 1e-06
 Identities = 26/57 (45%), Positives = 33/57 (57%)
 Frame = +3

Query: 303 GAIAASALKSFGFAHDFDQKYTLGRAIGAGTFGTVHLATDKATGQEVAVKVITKRVM 473
           G I       FG+A DFD +YT+G+ +G G FG  ++ATD   G  VAVK I K  M
Sbjct: 51  GGIPYGKRIDFGYAKDFDNRYTIGKLLGHGQFGFTYVATDNNNGNRVAVKRIDKAKM 107



EST assemble image


clone accession position
1 CL78h03_r AV397205 1 484
2 CL80h06_r AV397345 5 490




Chlamydomonas reinhardtii
Kazusa DNA Research Institute