Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000853A_C01 KCC000853A_c01
(555 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_320216.1| ENSANGP00000009012 [Anopheles gambiae] gi|21288... 44 0.001
gb|AAD44968.1|AF157498_1 CNS myelin protein MOBP-169 [Rattus nor... 42 0.005
pir||B55663 oligodendrocyte-specific proline-rich protein - rat ... 42 0.005
dbj|BAA77511.2| hyperpolarization activated cation channel [Oryc... 42 0.007
ref|XP_304856.1| hypothetical protein XP_304856 [Homo sapiens] 42 0.007
>ref|XP_320216.1| ENSANGP00000009012 [Anopheles gambiae] gi|21288349|gb|EAA00670.1|
ENSANGP00000009012 [Anopheles gambiae str. PEST]
Length = 168
Score = 43.9 bits (102), Expect = 0.001
Identities = 36/96 (37%), Positives = 43/96 (44%), Gaps = 8/96 (8%)
Frame = -2
Query: 551 SRRAKRCRSRTSGPARSSIRAACSAPGLRAPHQKELASP----ASAGPRSSPPPG*PPSR 384
S R+ +RT + + + A SAP A + +P A A P SP P
Sbjct: 42 SARSPAADARTPSASGAPVPAGSSAPPAAARALRAFPTPRPARAPAAPAQSPRP------ 95
Query: 383 TRAWPCSSP*LGGHGTASLPPAM-RG---PPRRLRT 288
AWP S P GTAS PPA RG P RRLRT
Sbjct: 96 --AWPVSRPPASSPGTASRPPARPRGANPPARRLRT 129
>gb|AAD44968.1|AF157498_1 CNS myelin protein MOBP-169 [Rattus norvegicus]
Length = 169
Score = 42.0 bits (97), Expect = 0.005
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = -2
Query: 524 RTSGPARSSIRAACSAPGLRAPHQKELASPASAGPRSSPPPG*P--PSRTRAWPCSSP*L 351
R + P + + A S +RAP K + P A PRS P P P PSRT P P
Sbjct: 71 RATSPQKPKHQPAASPVVVRAPPAKPKSPPRPAKPRSPPIPAKPRSPSRTERQPRPRP-- 128
Query: 350 GGHGTASLPPAMRGPPRRLRTPEHRRMMR 264
PPA + PP++ + P +R
Sbjct: 129 ----EVRPPPAKQKPPQKSKQPARSSPLR 153
>pir||B55663 oligodendrocyte-specific proline-rich protein - rat
gi|1408057|dbj|BAA05657.1| MOBP [Rattus norvegicus]
Length = 170
Score = 42.0 bits (97), Expect = 0.005
Identities = 29/89 (32%), Positives = 39/89 (43%), Gaps = 2/89 (2%)
Frame = -2
Query: 524 RTSGPARSSIRAACSAPGLRAPHQKELASPASAGPRSSPPPG*P--PSRTRAWPCSSP*L 351
R + P + + A S +RAP K + P A PRS P P P PSRT P P
Sbjct: 71 RATSPQKPKHQPAASPVVVRAPPAKPKSPPRPAKPRSPPIPAKPRSPSRTERQPRPRP-- 128
Query: 350 GGHGTASLPPAMRGPPRRLRTPEHRRMMR 264
PPA + PP++ + P +R
Sbjct: 129 ----EVRPPPAKQKPPQKSKQPARSSPLR 153
>dbj|BAA77511.2| hyperpolarization activated cation channel [Oryctolagus cuniculus]
Length = 1175
Score = 41.6 bits (96), Expect = 0.007
Identities = 34/97 (35%), Positives = 41/97 (42%), Gaps = 21/97 (21%)
Frame = -2
Query: 530 RSRTSGPARSSIRAACSAPGL------------RAPHQKELASPASAG-------PRSSP 408
RS TS P + +PGL R P + A+ ASAG PR P
Sbjct: 947 RSPTSSPGQLGQPPGELSPGLGSGPPGTPETPPRQPERLPFAAGASAGASPVAFSPRGGP 1006
Query: 407 -PPG*PPSRTRAWPCSSP*L-GGHGTASLPPAMRGPP 303
PPG P R +P + P G HG+ LPPA PP
Sbjct: 1007 SPPGHSPGTPRTFPSAPPRASGSHGSLLLPPASSPPP 1043
>ref|XP_304856.1| hypothetical protein XP_304856 [Homo sapiens]
Length = 498
Score = 41.6 bits (96), Expect = 0.007
Identities = 29/71 (40%), Positives = 36/71 (49%)
Frame = -2
Query: 551 SRRAKRCRSRTSGPARSSIRAACSAPGLRAPHQKELASPASAGPRSSPPPG*PPSRTRAW 372
SRRA + S + G +++ A SAPG AP E ASPA P G P SR +
Sbjct: 298 SRRALQAASGSLGTKAATLSMALSAPGTTAPPGVEAASPAGRCPGEGAADGSPVSRRQ-- 355
Query: 371 PCSSP*LGGHG 339
PC S GG+G
Sbjct: 356 PCESG-SGGNG 365
