Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000831A_C01 KCC000831A_c01
(483 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAF78235.1| 163R* [porcine adenovirus 3] 44 0.001
dbj|BAB01652.1| unnamed protein product [Macaca fascicularis] 40 0.011
ref|ZP_00057173.1| COG2812: DNA polymerase III, gamma/tau subuni... 40 0.015
gb|AAO59913.1|AF467292_1 CATH1 [Gallus gallus] 40 0.019
ref|XP_327148.1| predicted protein [Neurospora crassa] gi|289193... 39 0.025
>gb|AAF78235.1| 163R* [porcine adenovirus 3]
Length = 163
Score = 43.9 bits (102), Expect = 0.001
Identities = 27/68 (39%), Positives = 33/68 (47%), Gaps = 1/68 (1%)
Frame = -2
Query: 362 AGPQMPAKAPWRS-RRRCPPPDPPEPPLVLQPDPVARSELASSFRPQRPAGARARASTEP 186
+GP P PW S +RR PPP PP+ P L P P R ++ P PA A A+ P
Sbjct: 30 SGPSHPPPLPWCSLQRRAPPPRPPQSPPPLPPRPPPR-PWPAAVSPPPPAAPAAAAAAPP 88
Query: 185 TGFPPNSC 162
P SC
Sbjct: 89 A--PAASC 94
>dbj|BAB01652.1| unnamed protein product [Macaca fascicularis]
Length = 248
Score = 40.4 bits (93), Expect = 0.011
Identities = 31/98 (31%), Positives = 38/98 (38%), Gaps = 8/98 (8%)
Frame = -2
Query: 467 PPLPGAPELLLCFLIACTEHRCCALGEAAKSMCALAGPQMPAKAPWRSRRRCPP------ 306
PP A C AC R A G + A P + WR+RR C
Sbjct: 27 PPRSAAQRRARC---ACAGARTAAPGAWSSGTRAPGAPCVTTAGTWRTRRSCAASWAVVG 83
Query: 305 PDPP--EPPLVLQPDPVARSELASSFRPQRPAGARARA 198
P PP PPL L PDP + + +RP GA R+
Sbjct: 84 PSPPWGPPPLALAPDPCGWTRWGAG-AARRPCGAALRS 120
>ref|ZP_00057173.1| COG2812: DNA polymerase III, gamma/tau subunits [Thermobifida
fusca]
Length = 692
Score = 40.0 bits (92), Expect = 0.015
Identities = 26/74 (35%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -2
Query: 398 ALGEAAKSMCALAGPQMPAKAPWRSRRRCPPPDPPEPPLVLQPDPVARSELASSFRPQRP 219
A+ A A A P PA AP S PP PP P P P A + + RP +P
Sbjct: 395 AVSPPAAGTPATAPPSTPAAAPRPSTAEPRPPQPPAPSARPHPAPAAADDWGAPRRPSQP 454
Query: 218 AGARAR-ASTEPTG 180
A A + A+ P G
Sbjct: 455 APAAPQPAAPGPAG 468
>gb|AAO59913.1|AF467292_1 CATH1 [Gallus gallus]
Length = 177
Score = 39.7 bits (91), Expect = 0.019
Identities = 27/63 (42%), Positives = 29/63 (45%)
Frame = -2
Query: 362 AGPQMPAKAPWRSRRRCPPPDPPEPPLVLQPDPVARSELASSFRPQRPAGARARASTEPT 183
A P+ PAKA R PPP PP PP P AR+ F P AG A A EP
Sbjct: 69 APPEPPAKAELRGAPFEPPPPPPPPPPRASPPAPARTR----FPPAAAAGGFA-AQLEPL 123
Query: 182 GFP 174
FP
Sbjct: 124 RFP 126
>ref|XP_327148.1| predicted protein [Neurospora crassa] gi|28919337|gb|EAA28792.1|
predicted protein [Neurospora crassa]
Length = 686
Score = 39.3 bits (90), Expect = 0.025
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Frame = -2
Query: 389 EAAKSMCALAGPQMP-AKAPWRSRRRCPPPDPPEPP----LVLQPDPVARSELASSFRPQ 225
E +++GP P A+AP SR + PPP PP + ++P RS + S+ RP
Sbjct: 242 EPQSQRTSISGPIRPTAQAPATSRSKAPPPPPPSSRHGKLIKVEPKGEERSGMPSTPRPS 301
Query: 224 RPAGARA-RASTEPTGFPPNSCNVQI 150
+ ARA R P P+ N +
Sbjct: 302 SSSSARASRVLASPFSEQPSDVNTPL 327
