KCC000829A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000829A_C01 KCC000829A_c01
tacgTTGGGAAGCCTTTAATGGCTGAATTGGTTGATAAGATGGCCGCTGCTTCCGTGGGA
CCCTCCCCTGTGGAGGAGCGTATGCCCTACTACAAAAAGCGTGTCGAGGTCTTTGAGAAG
TTCCTTGAGCGTGAGCAGGCCAAGCTCGAGGCCGCGAAGGCCGCCAATGTGGCTATCAAG
GTGATCATGCCCGACGGCAAGGAGCGCGCCGCGGTCCAGGGCGTGACCACTCCCATGGAC
ATTGCTAAAGAGATCTCGGCCAGCCTGGCGAAGAAGGTGGTGGTCGCGGACGTGGACGGG
CACGCATGGGACCTGGCCCGCCCGCTGGAGGGCGATTGTGCGCTTAAGCTATTCAGCTTT
GACGACACCGAGGGCAAGGACGCCTTCTGGCACTCCTCGGCCCATTTGCTGGGCCAGGCG
CTGGAGCTGGAGTTCGGCGTGGACCTCACCATCGGCCCCGCGCTGGAGGAGGGCTTCTAC
TATGACT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000829A_C01 KCC000829A_c01
         (487 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

emb|CAD60761.1| unnamed protein product [Podospora anserina]          127  5e-29
ref|XP_331156.1| hypothetical protein [Neurospora crassa] gi|289...   127  5e-29
ref|NP_198035.2| threonyl-tRNA synthetase [Arabidopsis thaliana]...   127  7e-29
pir||T51624 threonine-tRNA ligase (EC 6.1.1.3) [imported] - Arab...   127  7e-29
gb|AAK82468.1| AT5g26830/F2P16_90 [Arabidopsis thaliana] gi|2902...   127  9e-29

>emb|CAD60761.1| unnamed protein product [Podospora anserina]
          Length = 783

 Score =  127 bits (320), Expect = 5e-29
 Identities = 66/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
 Frame = +1

Query: 43  AAASVGPSPVEERMPYYKKRVEVFEKFLEREQAKLEAAKAANVAIKVIMPDGKERAAVQG 222
           A AS GP  +     + ++R+++F++  + +Q   E A      I + MPDG  +     
Sbjct: 34  ADASAGPLEMNPPPSFIQERIDLFDRLYKEQQE--EIASRPREDITITMPDGTIKVGKSY 91

Query: 223 VTTPMDIAKEISASLAKKVVVADVDGHA-WDLARPLEGDCALKLFSFDDTEGKDAFWHSS 399
            TTP +IAK IS SL K+ VVA +DG   WDL RPLE  C L+L  F+D +GK  FWHSS
Sbjct: 92  ETTPAEIAKGISNSLFKRTVVARIDGETLWDLERPLEKSCKLELLDFNDDQGKFVFWHSS 151

Query: 400 AHLLGQALELEFGVDLTIGPALEEGFYYD 486
           AH+LG+A E  FG  L IGP ++ GFYY+
Sbjct: 152 AHILGEACERRFGCSLCIGPPVDNGFYYE 180

>ref|XP_331156.1| hypothetical protein [Neurospora crassa] gi|28921255|gb|EAA30565.1|
           hypothetical protein [Neurospora crassa]
          Length = 788

 Score =  127 bits (320), Expect = 5e-29
 Identities = 66/149 (44%), Positives = 90/149 (60%), Gaps = 1/149 (0%)
 Frame = +1

Query: 43  AAASVGPSPVEERMPYYKKRVEVFEKFLEREQAKLEAAKAANVAIKVIMPDGKERAAVQG 222
           A    GP  +     + ++R+++F+K  + +Q +L  AK     I + MPDG  +     
Sbjct: 37  AGGDAGPLEMNPPPAFIQERLDLFDKLYKEQQEEL--AKRPRDDILITMPDGTTKTGKAY 94

Query: 223 VTTPMDIAKEISASLAKKVVVADVDGHA-WDLARPLEGDCALKLFSFDDTEGKDAFWHSS 399
            TTP +IAK IS SL K+ VVA +DG   WDL RPLE  C L+L  F+D +GK  FWHSS
Sbjct: 95  ETTPAEIAKGISNSLFKRTVVARIDGETLWDLERPLEKSCKLELLDFNDDQGKFVFWHSS 154

Query: 400 AHLLGQALELEFGVDLTIGPALEEGFYYD 486
           AH+LG+A E  FG  L IGP ++ GFYY+
Sbjct: 155 AHILGEACERRFGCSLCIGPPVDNGFYYE 183

>ref|NP_198035.2| threonyl-tRNA synthetase [Arabidopsis thaliana]
           gi|27735258|sp|O04630|SYT_ARATH Threonyl-tRNA
           synthetase, mitochondrial precursor (Threonine--tRNA
           ligase) (ThrRS)
          Length = 709

 Score =  127 bits (319), Expect = 7e-29
 Identities = 64/132 (48%), Positives = 85/132 (63%), Gaps = 2/132 (1%)
 Frame = +1

Query: 97  KRVEVFEKFLEREQAKLEAAKAANVAIKVIMPDGKERAAVQGVTTPMDIAKEISASLAKK 276
           KR+++FE+    +   L++    +  IKV +PDG  +   +  TTPMDIA +IS  LA  
Sbjct: 51  KRIKLFEQIQANQLENLKSLP--HDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANS 108

Query: 277 VVVADVDGHAWDLARPLEGDCALKLFSFDDTEGKDAFWHSSAHLLGQALELEFGVDLTIG 456
            +++ VD   WD+ RPLEGDC L+LF FD  +G+D  WHSSAH+LGQALE E+G  L IG
Sbjct: 109 ALISAVDDVLWDMNRPLEGDCKLELFKFDSDKGRDTLWHSSAHILGQALEQEYGCQLCIG 168

Query: 457 PALE--EGFYYD 486
           P     EGFYYD
Sbjct: 169 PCTTRGEGFYYD 180

>pir||T51624 threonine-tRNA ligase (EC 6.1.1.3) [imported] - Arabidopsis
           thaliana gi|3617770|emb|CAA74705.1| threonyl-tRNA
           synthetase [Arabidopsis thaliana]
          Length = 709

 Score =  127 bits (319), Expect = 7e-29
 Identities = 64/132 (48%), Positives = 85/132 (63%), Gaps = 2/132 (1%)
 Frame = +1

Query: 97  KRVEVFEKFLEREQAKLEAAKAANVAIKVIMPDGKERAAVQGVTTPMDIAKEISASLAKK 276
           KR+++FE+    +   L++    +  IKV +PDG  +   +  TTPMDIA +IS  LA  
Sbjct: 51  KRIKLFEQIQANQLENLKSLP--HDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANS 108

Query: 277 VVVADVDGHAWDLARPLEGDCALKLFSFDDTEGKDAFWHSSAHLLGQALELEFGVDLTIG 456
            +++ VD   WD+ RPLEGDC L+LF FD  +G+D  WHSSAH+LGQALE E+G  L IG
Sbjct: 109 ALISAVDDVLWDMNRPLEGDCKLELFKFDSDKGRDTLWHSSAHILGQALEQEYGCQLCIG 168

Query: 457 PALE--EGFYYD 486
           P     EGFYYD
Sbjct: 169 PCTTRGEGFYYD 180

>gb|AAK82468.1| AT5g26830/F2P16_90 [Arabidopsis thaliana]
           gi|29028762|gb|AAO64760.1| At5g26830/F2P16_90
           [Arabidopsis thaliana]
          Length = 676

 Score =  127 bits (318), Expect = 9e-29
 Identities = 64/132 (48%), Positives = 85/132 (63%), Gaps = 2/132 (1%)
 Frame = +1

Query: 97  KRVEVFEKFLEREQAKLEAAKAANVAIKVIMPDGKERAAVQGVTTPMDIAKEISASLAKK 276
           KR+++FE+    +   L++    +  IKV +PDG  +   +  TTPMDIA +IS  LA  
Sbjct: 18  KRIKLFEQIQANQLENLKSLP--HDPIKVTLPDGNVKEGKKWETTPMDIAAQISKGLANS 75

Query: 277 VVVADVDGHAWDLARPLEGDCALKLFSFDDTEGKDAFWHSSAHLLGQALELEFGVDLTIG 456
            +++ VD   WD+ RPLEGDC L+LF FD  +G+D  WHSSAH+LGQALE E+G  L IG
Sbjct: 76  ALISAVDDVLWDVNRPLEGDCKLELFKFDSDKGRDTLWHSSAHILGQALEQEYGCQLCIG 135

Query: 457 PALE--EGFYYD 486
           P     EGFYYD
Sbjct: 136 PCTTRGEGFYYD 147



EST assemble image


clone accession position
1 MXL047h09_r BP095821 1 128
2 CL72h03_r AV397027 5 471
3 HCL031c05_r AV641297 7 487
4 HCL029g01_r AV641204 22 487




Chlamydomonas reinhardtii
Kazusa DNA Research Institute