KCC000825A_c01_1
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000825A_C01_1 KCC000825A_c01_1
ccaagcccagcgtgaccgtgtccatgtcaaagagcgagagcgtgatcgccggcggcgcag
acccctgcaccggggccgtgAGCGAGAGCGCCAACCTGCTGAGCGCCCTGGCGCGCGACG
CCGGCTCCTCCGTCAACTCCAACACACTGCGCAGTACCGGCTGCAAGAGCCAGCGCGTGG
CGGGCACCACCTCCGACCCCAACGCGCCCGGCGCCACGCCAGTCCCCGGTGGCGCCCCCG
GCACCGCGCCCACGCCCGGACCCAGCGACTCTCCCAGGACGCGCCAGTCTGTCCAGCGGT
GCCATTCGCCGGCATTGTCATCGGCGCCGTCGCGGGCGCCGTGCTCATCGGCTTCGTGGG
CATTGCCGTGCGCAACAAGATGAGCCAGCGCAGTCCGGTGACCATGGTCGGCCGCGACGG
CACCACGCGCACCACCACGCCACGTGGCTGGGCCCGCGGGCGCTGGATGACCTACTCTAT
GCAGGAGAAGGCCGAGCAGGCGCGCTCGGGCAGCGCGCCGGTCGCAGGCGTGTCGACATA
TTAATGATATTACCGTATCCAGCATTGAAGCTGGTGGGTGCACTACAGCCTGCTAGACGC
AGCAGGCTTGCGCCCTCAAAGAGTCGTGCCGTGTCGTGTGGTGTGGTGTTTCAAGAACCG
GGAAGCCGTCGGGTCCGCGCGCTTGTGTCGAGGCGTGCTTTACGGGTCGGCAGAGTCGTC
GCCGATTTCATGGGAGGATTTATTCCGGGATTCTCTACTAGCCGATCACCCGCACCCCAC
CGCCTTCCCTCTCCATGCATCACACTCTGTGATGCGAGTAAGTGGCAGCGCTGGCCACAC
TGCACGCCATGGGGGCATGCTTATTGAATGTTCAAGCTTATCAAAATGTAGCGGGTCATA
CAGATACTGCCCGCAACTGCTAGCTGTGTCTGACGCACTGCTGGCATTGATGGTGGTTAT
AGAGCTGGAAATGGATTGCATATGCGTGCACTGTCCTTGATGCCTGTCTTCAGAGGTGTG
CGTGTGCCGCCTTGAAGCCCCTGACTCAGACAGAGCTGTGGCAATGAGTAATTGCCCAGC
TATAACG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000825A_C01_1 KCC000825A_c01_1
         (1087 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_055541.1| ProSAPiP2 protein [Homo sapiens] gi|3882271|dbj...    61  4e-08
ref|XP_311129.1| ENSANGP00000004749 [Anopheles gambiae] gi|30178...    61  4e-08
ref|ZP_00009817.1| COG2885: Outer membrane protein and related p...    57  4e-07
sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (...    57  7e-07
gb|AAH57590.1| 3110043L15Rik protein [Mus musculus]                    56  1e-06

>ref|NP_055541.1| ProSAPiP2 protein [Homo sapiens] gi|3882271|dbj|BAA34495.1|
           KIAA0775 protein [Homo sapiens]
          Length = 615

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 47/126 (37%), Positives = 64/126 (50%), Gaps = 10/126 (7%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPA--AQTPAPGP*ARAPTC*APW-RATPAPPSTPTHCAVPAARA 171
           P+P  P P   ARA  P    Q+P P   +  P C +P  R +PA PS P+   VP  R+
Sbjct: 343 PAPQCPSPSPPARAAPPCPPCQSPVPQRRSPVPPCPSPQQRRSPASPSCPS--PVPQRRS 400

Query: 172 SAWRAPPPTPTRPAP-RQSPVAP--PAPRPRPDPATLPGRASLSSGAIRR----HCHRRR 330
                 PP+   P+P R+SPV P  PAP+PRP P   PG  +L+  A  +    H     
Sbjct: 401 PV----PPSCQSPSPQRRSPVPPSCPAPQPRPPPPPPPGERTLAERAYAKPPSHHVKAGF 456

Query: 331 RGRRAH 348
           +GRR++
Sbjct: 457 QGRRSY 462

>ref|XP_311129.1| ENSANGP00000004749 [Anopheles gambiae] gi|30178092|gb|EAA06612.2|
           ENSANGP00000004749 [Anopheles gambiae str. PEST]
          Length = 633

 Score = 60.8 bits (146), Expect = 4e-08
 Identities = 38/97 (39%), Positives = 43/97 (44%), Gaps = 4/97 (4%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           P P  P PC R+    PA  TP   P              P+PP+TPT   +P     A+
Sbjct: 11  PGPIMPTPCDRSCCTPPAPPTPTTLP-------------PPSPPTTPTTPPMPPPTDMAF 57

Query: 181 RAPPPTPTRPAPRQSPVAPPA----PRPRPDPATLPG 279
             PP TPT P P   PV  P     PRP P P TLPG
Sbjct: 58  TGPP-TPTTPTPTTLPVPAPGMPTLPRPPPMPTTLPG 93

 Score = 44.3 bits (103), Expect = 0.004
 Identities = 30/91 (32%), Positives = 35/91 (37%), Gaps = 15/91 (16%)
 Frame = +1

Query: 49  PAAQTPAPGP*ARAPTC*APWRAT----------PAPPSTP-----THCAVPAARASAWR 183
           P    P P P    P C  P+             PAPP+TP        AVP +      
Sbjct: 79  PTLPRPPPMP-TTLPGCMGPFDVATVVALGPIVPPAPPTTPYGLLARRSAVPVSPVPPVP 137

Query: 184 APPPTPTRPAPRQSPVAPPAPRPRPDPATLP 276
           APP  P  PAP   P  PP P P P+   +P
Sbjct: 138 APPALPIVPAPPVPPPPPPPPPPIPESRAIP 168

 Score = 43.9 bits (102), Expect = 0.005
 Identities = 38/118 (32%), Positives = 47/118 (39%), Gaps = 35/118 (29%)
 Frame = +1

Query: 4   SPA*PCPCQRARA*SPAAQTPA----------------PGP*ARAPTC*APWRATPAPPS 135
           SP  P PC  A   SP+A  P+                 GP A       P R+  APPS
Sbjct: 518 SPCTPSPCAAACPTSPSAARPSGCPGRSPPSAPPAARPAGPPAACTARAPPGRSRSAPPS 577

Query: 136 -------------TPTHCAV------PAARASAWRAPPPTPTRPAPRQSPVAPPAPRP 252
                        +P  C+       PA+ A+   + PP  +RPAPR  P AP APRP
Sbjct: 578 RSSAGPAVASGCGSPPDCSASCAARPPASPAAPRSSAPPGASRPAPR--PAAPGAPRP 633

 Score = 43.5 bits (101), Expect = 0.006
 Identities = 33/88 (37%), Positives = 37/88 (41%), Gaps = 3/88 (3%)
 Frame = +1

Query: 31  RARA*SPAAQTPAPGP*ARAPTC*APWRAT---PAPPSTPTHCAVPAARASAWRAPPPTP 201
           RA A  P+AQ   PG  A A    A   A    PA P TP+ CA     + +   P   P
Sbjct: 483 RAPARPPSAQAAGPGVVAAAAAAAAAPAAVAVRPASPCTPSPCAAACPTSPSAARPSGCP 542

Query: 202 TRPAPRQSPVAPPAPRPRPDPATLPGRA 285
                R  P APPA RP   PA    RA
Sbjct: 543 ----GRSPPSAPPAARPAGPPAACTARA 566

 Score = 37.7 bits (86), Expect = 0.35
 Identities = 23/57 (40%), Positives = 25/57 (43%)
 Frame = +1

Query: 115 ATPAPPSTPTHCAVPAARASAWRAPPPTPTRPAPRQSPVAPPAPRPRPDPATLPGRA 285
           A PAPP TP    +P    S   APPP P        P+A P    R  P  LP RA
Sbjct: 429 APPAPPPTPPFGPMPLPMPSM-PAPPPAPIAFTTTLLPIAWPTRAARASPPALPFRA 484

 Score = 37.4 bits (85), Expect = 0.46
 Identities = 29/85 (34%), Positives = 31/85 (36%)
 Frame = +1

Query: 46  SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAWRAPPPTPTRPAPRQS 225
           SP    PAP      P    P    P PP  P   A+P+          P P  P P   
Sbjct: 131 SPVPPVPAPPALPIVPAPPVPPPPPPPPPPIPESRAIPSY---------PAPALP-PSTG 180

Query: 226 PVAPPAPRPRPDPATLPGRASLSSG 300
           P  PPAP   P PA LP    L  G
Sbjct: 181 PPVPPAP---PPPAPLPAAKLLVFG 202

 Score = 33.5 bits (75), Expect = 6.6
 Identities = 23/78 (29%), Positives = 27/78 (34%), Gaps = 12/78 (15%)
 Frame = +1

Query: 4   SPA*PCPCQRARA*SPAAQTPAPGP*ARAPT------------C*APWRATPAPPSTPTH 147
           SP  P P   A    PA   P P P    P                P    P PP+ P  
Sbjct: 131 SPVPPVPAPPALPIVPAPPVPPPPPPPPPPIPESRAIPSYPAPALPPSTGPPVPPAPPPP 190

Query: 148 CAVPAARASAWRAPPPTP 201
             +PAA+   +  PPP P
Sbjct: 191 APLPAAKLLVFGPPPPPP 208

>ref|ZP_00009817.1| COG2885: Outer membrane protein and related
           peptidoglycan-associated (lipo)proteins
           [Rhodopseudomonas palustris]
          Length = 689

 Score = 57.4 bits (137), Expect = 4e-07
 Identities = 40/95 (42%), Positives = 42/95 (44%), Gaps = 1/95 (1%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           P P  P P + A    P A  PAP          AP RA P PP  P+H A P     A 
Sbjct: 87  PPPPPPAPPRAAPPPPPPAAAPAP----------APKRAEPPPPPPPSHSAPPPPPPHA- 135

Query: 181 RAPPPTPTRPAPRQSPVAPPAPRP-RPDPATLPGR 282
            APPP P  P P   P A PA RP  P PA  P R
Sbjct: 136 -APPPPPA-PKPSAPPTAAPAERPAAPPPAAAPVR 168

 Score = 52.0 bits (123), Expect = 2e-05
 Identities = 37/97 (38%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
 Frame = +3

Query: 183 GTTSDPNAPGATPVPGGAPGTAPTPGPSDSPRTRQSVQRCHSPALSSAPSRAPCSSASWA 362
           GT  +  APG TP PG AP   P P P+ +     +     +PA S+AP  AP S A+ +
Sbjct: 224 GTPPNATAPGMTPPPGEAPRRGPPPPPAAANPPPAAAP---TPAPSAAPQAAPTSPANPS 280

Query: 363 LPCATR*A--SAVR*PWSAATAPRAPPRHVAGPAGAG 467
            P     A  S  R P   A A   PPR  AGP   G
Sbjct: 281 GPAVAPVARPSGERGPQPGAPAGGPPPRPQAGPGAPG 317

 Score = 51.6 bits (122), Expect = 2e-05
 Identities = 35/96 (36%), Positives = 40/96 (41%), Gaps = 4/96 (4%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           P+PA P     A    PAA  P   P    P   AP RA P PP  P     PA + +  
Sbjct: 62  PAPAPPKAAPSAPPPPPAAAPPHVAPPPPPP---APPRAAP-PPPPPAAAPAPAPKRAEP 117

Query: 181 RAPPP----TPTRPAPRQSPVAPPAPRPRPDPATLP 276
             PPP     P  P P  +P  PPAP+P   P   P
Sbjct: 118 PPPPPPSHSAPPPPPPHAAPPPPPAPKPSAPPTAAP 153

 Score = 48.1 bits (113), Expect = 3e-04
 Identities = 37/105 (35%), Positives = 43/105 (40%), Gaps = 10/105 (9%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPA---AQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARA 171
           P  A P P   A A +PA   A+ P P P + +     P  A P PP  P   A P A  
Sbjct: 94  PPRAAPPPPPPAAAPAPAPKRAEPPPPPPPSHSAPPPPPPHAAPPPPPAPKPSAPPTA-- 151

Query: 172 SAWRAPPPTPTRPAPRQSPVAPPAP-------RPRPDPATLPGRA 285
               AP   P  P P  +PV PPAP       R  P P  +P  A
Sbjct: 152 ----APAERPAAPPPAAAPVRPPAPPAGEAPQRRGPPPGAVPPNA 192

 Score = 45.1 bits (105), Expect = 0.002
 Identities = 30/85 (35%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
 Frame = +1

Query: 52  AAQTPAPGP*-ARAPTC*APWRATPAPPSTPTHCAVPAARASAWRAPPPTPT-----RPA 213
           A + P PGP  A AP   AP    P P + P H A P    +  RA PP P       PA
Sbjct: 52  AKEAPPPGPRPAPAPPKAAPSAPPPPPAAAPPHVAPPPPPPAPPRAAPPPPPPAAAPAPA 111

Query: 214 PRQSPVAPPAPRPRPDPATLPGRAS 288
           P+++   PP P     P   P  A+
Sbjct: 112 PKRAEPPPPPPPSHSAPPPPPPHAA 136

 Score = 40.4 bits (93), Expect = 0.054
 Identities = 34/85 (40%), Positives = 39/85 (45%), Gaps = 13/85 (15%)
 Frame = +1

Query: 49  PAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAV-PAARASAWRAPPP------TPTR 207
           PAA  P P   A  P   A  +A P  P+ P+  AV P AR S  R P P       P R
Sbjct: 250 PAAANPPPAA-APTPAPSAAPQAAPTSPANPSGPAVAPVARPSGERGPQPGAPAGGPPPR 308

Query: 208 P-----APRQSP-VAPPAPRPRPDP 264
           P     AP   P VAPP  +P+P P
Sbjct: 309 PQAGPGAPGAGPAVAPPPGQPQPVP 333

 Score = 39.7 bits (91), Expect = 0.092
 Identities = 27/80 (33%), Positives = 30/80 (36%), Gaps = 2/80 (2%)
 Frame = +1

Query: 46  SPAAQTPAPGP*ARAPTC*APWRATPAPP--STPTHCAVPAARASAWRAPPPTPTRPAPR 219
           +P     A  P    P   AP R  P PP  + P   A P    SA  AP   PT PA  
Sbjct: 222 APGTPPNATAPGMTPPPGEAPRRGPPPPPAAANPPPAAAPTPAPSA--APQAAPTSPANP 279

Query: 220 QSPVAPPAPRPRPDPATLPG 279
             P   P  RP  +    PG
Sbjct: 280 SGPAVAPVARPSGERGPQPG 299

 Score = 39.3 bits (90), Expect = 0.12
 Identities = 35/95 (36%), Positives = 40/95 (41%), Gaps = 5/95 (5%)
 Frame = +1

Query: 16  PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAWRAPPP 195
           P   + A A    AQ    GP A AP+     +A  APP  P     PA   +A  APPP
Sbjct: 23  PAAAESASAPMLLAQAVQGGP-APAPS---EEKAKEAPPPGPR--PAPAPPKAAPSAPPP 76

Query: 196 TPTRPAPRQSPVAPPA--PR---PRPDPATLPGRA 285
            P    P  +P  PP   PR   P P PA  P  A
Sbjct: 77  PPAAAPPHVAPPPPPPAPPRAAPPPPPPAAAPAPA 111

 Score = 38.9 bits (89), Expect = 0.16
 Identities = 39/101 (38%), Positives = 43/101 (41%), Gaps = 9/101 (8%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQT-PAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAAR-AS 174
           P+PA P    +A   SPA  + PA  P AR      P    PA    P   A P A  A 
Sbjct: 261 PTPA-PSAAPQAAPTSPANPSGPAVAPVARPSGERGPQPGAPAGGPPPRPQAGPGAPGAG 319

Query: 175 AWRAPPP---TPTRPAPRQSP----VAPPAPRPRPDPATLP 276
              APPP    P  P P Q P    VAPPAP P    A +P
Sbjct: 320 PAVAPPPGQPQPVPPQPGQPPAGPAVAPPAPPPPAVTAPIP 360

 Score = 38.5 bits (88), Expect = 0.21
 Identities = 34/103 (33%), Positives = 40/103 (38%), Gaps = 9/103 (8%)
 Frame = +1

Query: 1   PSPA*P---CPCQRARA*SPAA---QTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPA 162
           P P+ P    P +R  A  PAA   + PAP P   AP    P      P + P + A P 
Sbjct: 143 PKPSAPPTAAPAERPAAPPPAAAPVRPPAP-PAGEAPQRRGPPPGAVPPNAVPPNAAAPD 201

Query: 163 ARASAWRAPPPTPTRPAPRQSPVAPP---APRPRPDPATLPGR 282
           A        PP   R  P  +P  PP   AP   P P   P R
Sbjct: 202 AAKPDAAKQPPGERRGPPPGAPGTPPNATAPGMTPPPGEAPRR 244

 Score = 35.8 bits (81), Expect = 1.3
 Identities = 30/95 (31%), Positives = 38/95 (39%)
 Frame = +3

Query: 219 PVPGGAPGTAPTPGPSDSPRTRQSVQRCHSPALSSAPSRAPCSSASWALPCATR*ASAVR 398
           P P  AP   P P PS +P T    +R  +P  ++AP R P   A          A   R
Sbjct: 131 PPPHAAPPPPPAPKPS-APPTAAPAERPAAPPPAAAPVRPPAPPAGE--------APQRR 181

Query: 399 *PWSAATAPRAPPRHVAGPAGAG*PTLCRRRPSRR 503
            P   A  P A P + A P  A  P   ++ P  R
Sbjct: 182 GPPPGAVPPNAVPPNAAAPDAAK-PDAAKQPPGER 215

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 30/94 (31%), Positives = 33/94 (34%), Gaps = 4/94 (4%)
 Frame = +1

Query: 7   PA*PCPCQRARA*SP--AAQTPAPGP*ARAPTC*APWR--ATPAPPSTPTHCAVPAARAS 174
           P  P P   A    P  AA  P P P   AP   AP    A P P + P     P A  +
Sbjct: 118 PPPPPPSHSAPPPPPPHAAPPPPPAPKPSAPPTAAPAERPAAPPPAAAPVRPPAPPAGEA 177

Query: 175 AWRAPPPTPTRPAPRQSPVAPPAPRPRPDPATLP 276
             R  PP    P     P A      +PD A  P
Sbjct: 178 PQRRGPPPGAVPPNAVPPNAAAPDAAKPDAAKQP 211

 Score = 35.4 bits (80), Expect = 1.7
 Identities = 33/115 (28%), Positives = 38/115 (32%), Gaps = 11/115 (9%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC-----------*APWRATPAPPSTPTH 147
           P  A P P    +  +P    PA  P A  P              AP R  P P + P +
Sbjct: 132 PPHAAPPPPPAPKPSAPPTAAPAERPAAPPPAAAPVRPPAPPAGEAPQRRGPPPGAVPPN 191

Query: 148 CAVPAARASAWRAPPPTPTRPAPRQSPVAPPAPRPRPDPATLPGRASLSSGAIRR 312
              P A A     P      P  R+ P  PP     P  AT PG       A RR
Sbjct: 192 AVPPNAAAPDAAKPDAAKQPPGERRGP--PPGAPGTPPNATAPGMTPPPGEAPRR 244

 Score = 33.9 bits (76), Expect = 5.1
 Identities = 19/58 (32%), Positives = 22/58 (37%)
 Frame = +1

Query: 121 PAPPSTPTHCAVPAARASAWRAPPPTPTRPAPRQSPVAPPAPRPRPDPATLPGRASLS 294
           P  P TP +   P        AP   P  P    +P  PPA  P P P+  P  A  S
Sbjct: 220 PGAPGTPPNATAPGMTPPPGEAPRRGPPPPPAAANP--PPAAAPTPAPSAAPQAAPTS 275

>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
           glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
           vegetative cell wall protein gp1 [Chlamydomonas
           reinhardtii]
          Length = 555

 Score = 56.6 bits (135), Expect = 7e-07
 Identities = 30/91 (32%), Positives = 45/91 (48%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSPA P P        P+   P+P P   +P   +P  + P  P+ PT    P+   S  
Sbjct: 295 PSPAPPTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAPPTPSPSPSPSPSPS 354

Query: 181 RAPPPTPTRPAPRQSPVAPPAPRPRPDPATL 273
            +P P+P+ P+P  SP+  P+P+P P P  +
Sbjct: 355 PSPSPSPS-PSPSPSPIPSPSPKPSPSPVAV 384

 Score = 55.5 bits (132), Expect = 2e-06
 Identities = 38/95 (40%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*-APWRATPAPPSTPTHCAVPAARASA 177
           PSPA P P   + A  P+   P+PGP + AP    +P   +PAPPS       P + A  
Sbjct: 46  PSPAPPSPAPPSPA-PPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAPPSPAPPSPAPP 104

Query: 178 WRAPP-PTPTRPAPRQSP-VAPPAPRPRPDPATLP 276
             APP P P  PAP   P  APP+P P   P+  P
Sbjct: 105 SPAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPSP 139

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 34/100 (34%), Positives = 44/100 (44%), Gaps = 1/100 (1%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           P P  P P       SP +  P+P P    PT  +P   +P PPS       PA  + A 
Sbjct: 274 PPPRPPFPANTPMPPSPPSPPPSPAP-PTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAP 332

Query: 181 RAPP-PTPTRPAPRQSPVAPPAPRPRPDPATLPGRASLSS 297
             PP P P  P+P  SP   P+P P P P+  P  + + S
Sbjct: 333 SPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIPS 372

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 39/94 (41%), Positives = 50/94 (52%), Gaps = 2/94 (2%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSPA P P   + A  P+   P+P P + AP   AP   +PAPPS P+    PA  + + 
Sbjct: 79  PSPAPPSPAPPSPA-PPSPAPPSPAPPSPAPPSPAP--PSPAPPSPPS----PAPPSPSP 131

Query: 181 RAPP-PTPTRPAPRQSPV-APPAPRPRPDPATLP 276
            APP P+P  PAP   P  APP+P P   P+  P
Sbjct: 132 PAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSP 165

 Score = 55.1 bits (131), Expect = 2e-06
 Identities = 36/95 (37%), Positives = 42/95 (43%), Gaps = 3/95 (3%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSPA P P   A    P+   P+P P    P   +P   +PAPPS       P A     
Sbjct: 213 PSPAPPSPPSPAPPSPPSPAPPSPSP----PAPPSPVPPSPAPPSPAPPSPKPPAPPPPP 268

Query: 181 RAPPPTPTRP---APRQSPVAPPAPRPRPDPATLP 276
             PPP P RP   A    P +PP+P P P P T P
Sbjct: 269 SPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPP 303

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 38/91 (41%), Positives = 46/91 (49%), Gaps = 2/91 (2%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*-SPAAQTP-APGP*ARAPTC*APWRATPAPPSTPTHCAVPAARAS 174
           PSPA P P   +    SPA  +P +P P + AP   AP   +PAPPS       P + A 
Sbjct: 56  PSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPSPAP--PSPAPPSPAPPSPAPPSPAP 113

Query: 175 AWRAPPPTPTRPAPRQSPVAPPAPRPRPDPA 267
              APP  P+   P  SP APP+P P P PA
Sbjct: 114 PSPAPPSPPSPAPPSPSPPAPPSPSP-PSPA 143

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 40/93 (43%), Positives = 47/93 (50%), Gaps = 1/93 (1%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSPA P P       SPA  +P P P   +P   AP   +P+PP+ P+   VP + A   
Sbjct: 200 PSPAPPSPAPPVPP-SPAPPSP-PSPAPPSPPSPAP--PSPSPPAPPS--PVPPSPAPPS 253

Query: 181 RAPP-PTPTRPAPRQSPVAPPAPRPRPDPATLP 276
            APP P P  P P  SP  PP PRP P PA  P
Sbjct: 254 PAPPSPKPPAPPPPPSPPPPPPPRP-PFPANTP 285

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 35/94 (37%), Positives = 47/94 (49%), Gaps = 2/94 (2%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHC-AVPAARASA 177
           PSPA P P        P+   P+P P + AP   +P   +PAPPS P+     PA  + A
Sbjct: 41  PSPAPPSPAP------PSPAPPSPAPPSPAPP--SPGPPSPAPPSPPSPAPPSPAPPSPA 92

Query: 178 WRAP-PPTPTRPAPRQSPVAPPAPRPRPDPATLP 276
             +P PP+P  P+P     APP+P P   P+  P
Sbjct: 93  PPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAP 126

 Score = 52.4 bits (124), Expect = 1e-05
 Identities = 39/94 (41%), Positives = 47/94 (49%), Gaps = 2/94 (2%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPG-P*ARAPTC*APWRATPAPPSTPTHCAVPAARASA 177
           PSPA P P       SPA  +PAP  P + AP    P   +PAPPS P+  A P+    A
Sbjct: 187 PSPAPPSPAPPVPP-SPAPPSPAPPVPPSPAP----PSPPSPAPPSPPS-PAPPSPSPPA 240

Query: 178 WRAP-PPTPTRPAPRQSPVAPPAPRPRPDPATLP 276
             +P PP+P  P+P      PPAP P P P   P
Sbjct: 241 PPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPP 274

 Score = 50.1 bits (118), Expect = 7e-05
 Identities = 35/92 (38%), Positives = 41/92 (44%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSPA P P   A   SP+   P P P    P   AP   TP  PS P    VP + A   
Sbjct: 140 PSPAPPLPPSPAPP-SPSPPVP-PSPSPPVPPSPAPPSPTPPSPSPP----VPPSPAPPS 193

Query: 181 RAPPPTPTRPAPRQSPVAPPAPRPRPDPATLP 276
            APP  P+   P  +P  PP+P P   P+  P
Sbjct: 194 PAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAP 225

 Score = 49.3 bits (116), Expect = 1e-04
 Identities = 32/88 (36%), Positives = 39/88 (43%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSPA P P   A    P+   P+P P + AP   +P    P PP +P     P     A 
Sbjct: 229 PSPAPPSPSPPA---PPSPVPPSPAPPSPAPP--SPKPPAPPPPPSPPPPPPPRPPFPAN 283

Query: 181 RAPPPTPTRPAPRQSPVAPPAPRPRPDP 264
              PP+P  P P  +P  PP P P P P
Sbjct: 284 TPMPPSPPSPPPSPAPPTPPTP-PSPSP 310

 Score = 47.8 bits (112), Expect = 3e-04
 Identities = 38/90 (42%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSPA P P       SP A  P+P P + AP    P   +PAPPS P+    P+      
Sbjct: 122 PSPAPPSP-------SPPA-PPSPSPPSPAP----PLPPSPAPPS-PSPPVPPSPSPPVP 168

Query: 181 RAP-PPTPTRPAPRQSPVAPPAPRPRPDPA 267
            +P PP+PT P+P  SP  PP+P P P PA
Sbjct: 169 PSPAPPSPTPPSP--SPPVPPSPAP-PSPA 195

 Score = 47.0 bits (110), Expect = 6e-04
 Identities = 37/90 (41%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSPA P P   + +  P   +PAP P    P   +P   +PAPP  P+  A P+  + A 
Sbjct: 169 PSPAPPSPTPPSPS-PPVPPSPAP-PSPAPPVPPSPAPPSPAPPVPPSP-APPSPPSPA- 224

Query: 181 RAPPPTPTRPA-PRQSPVAPPAPRPRPDPA 267
              PP+P  PA P  SP APP+P P P PA
Sbjct: 225 ---PPSPPSPAPPSPSPPAPPSPVP-PSPA 250

 Score = 47.0 bits (110), Expect = 6e-04
 Identities = 40/102 (39%), Positives = 49/102 (47%), Gaps = 7/102 (6%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*-SPAAQTPAP-GP*ARAPTC*APWRATPAPPS-TPTHCAVPAARA 171
           PSPA P P   + A  SPA  +PAP  P + AP   +P    PAPPS +P   A P   +
Sbjct: 94  PSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPAPPSPSP----PAPPSPSPPSPAPPLPPS 149

Query: 172 SAWRAP----PPTPTRPAPRQSPVAPPAPRPRPDPATLPGRA 285
            A  +P    PP+P+ P P  SP  P    P P P   P  A
Sbjct: 150 PAPPSPSPPVPPSPSPPVP-PSPAPPSPTPPSPSPPVPPSPA 190

 Score = 46.6 bits (109), Expect = 8e-04
 Identities = 39/104 (37%), Positives = 46/104 (43%), Gaps = 6/104 (5%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRA-TPAPPSTPTHCAVPAARASA 177
           PSPA P P   +    P A  P P P    P    P+ A TP PPS P+    PA     
Sbjct: 247 PSPAPPSPAPPSP--KPPAPPPPPSPPPPPPPR-PPFPANTPMPPSPPSPPPSPAPPTPP 303

Query: 178 WRAPPPTPTRPA-PRQSPV----APPAPRPRPDPATLPGRASLS 294
              P P+P  P  P  +PV    APP+P P P P+  P   S S
Sbjct: 304 -TPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAPPTPSPS 346

 Score = 46.2 bits (108), Expect = 0.001
 Identities = 33/92 (35%), Positives = 42/92 (44%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSP+ P P   A    P+   P+P P    P+   P  A P PPS       P    S  
Sbjct: 161 PSPSPPVPPSPA---PPSPTPPSPSPPV-PPSPAPPSPAPPVPPSPAPPSPAPPVPPSPA 216

Query: 181 RAPPPTPTRPAPRQSPVAPPAPRPRPDPATLP 276
              PP+P  P+P  SP APP+P P   P+ +P
Sbjct: 217 PPSPPSPAPPSP-PSP-APPSPSPPAPPSPVP 246

 Score = 45.8 bits (107), Expect = 0.001
 Identities = 35/96 (36%), Positives = 43/96 (44%), Gaps = 1/96 (1%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSPA P P   A         P+P P + AP    P   +PAPPS P+    P+      
Sbjct: 114 PSPAPPSPPSPAPPSPSPPAPPSPSPPSPAP----PLPPSPAPPS-PSPPVPPSPSPPVP 168

Query: 181 RAP-PPTPTRPAPRQSPVAPPAPRPRPDPATLPGRA 285
            +P PP+PT P+P   PV P    P P P   P  A
Sbjct: 169 PSPAPPSPTPPSP-SPPVPPSPAPPSPAPPVPPSPA 203

 Score = 45.4 bits (106), Expect = 0.002
 Identities = 34/98 (34%), Positives = 45/98 (45%), Gaps = 2/98 (2%)
 Frame = +1

Query: 1   PSPA*PCPCQRARA*SPAAQTPAPGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAW 180
           PSP+ P P   +    P+   P+P P + +P    P   +PAPPS      VP + A   
Sbjct: 153 PSPSPPVPPSPSPPVPPSPAPPSPTPPSPSP----PVPPSPAPPSPAP--PVPPSPAPPS 206

Query: 181 RAPP--PTPTRPAPRQSPVAPPAPRPRPDPATLPGRAS 288
            APP  P+P  P+P  SP  P  P P P   + P   S
Sbjct: 207 PAPPVPPSPAPPSP-PSPAPPSPPSPAPPSPSPPAPPS 243

 Score = 37.7 bits (86), Expect = 0.35
 Identities = 22/54 (40%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
 Frame = +3

Query: 198 PNAPGATPVPGGAPGT-APTPGPSDSPRTRQSVQRCHSPALSSAPSRAPCSSAS 356
           P +P  +P P  AP T +P+P PS SP    S     SP+ S  PS +P  S S
Sbjct: 327 PPSPAPSPPPSPAPPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIPSPSPKPSPS 380

 Score = 37.0 bits (84), Expect = 0.60
 Identities = 26/73 (35%), Positives = 31/73 (41%), Gaps = 7/73 (9%)
 Frame = +1

Query: 70  PGP*ARAPTC*APWRATPAPPSTPTHCAVPAARASAWRAP-------PPTPTRPAPRQSP 228
           PG     P   AP   +PAPPS       P + A     P       PP+P  P+P    
Sbjct: 33  PGGIFNCPPSPAP--PSPAPPSPAPPSPAPPSPAPPSPGPPSPAPPSPPSPAPPSPAPPS 90

Query: 229 VAPPAPRPRPDPA 267
            APP+P P P PA
Sbjct: 91  PAPPSPAP-PSPA 102

 Score = 34.7 bits (78), Expect = 3.0
 Identities = 19/50 (38%), Positives = 25/50 (50%)
 Frame = +3

Query: 192 SDPNAPGATPVPGGAPGTAPTPGPSDSPRTRQSVQRCHSPALSSAPSRAP 341
           S P +P A P P  +P  +P+P PS SP    S      P+ S  PS +P
Sbjct: 333 SPPPSP-APPTPSPSPSPSPSPSPSPSPSPSPSPSPSPIPSPSPKPSPSP 381

>gb|AAH57590.1| 3110043L15Rik protein [Mus musculus]
          Length = 596

 Score = 56.2 bits (134), Expect = 1e-06
 Identities = 41/111 (36%), Positives = 55/111 (48%), Gaps = 10/111 (9%)
 Frame = +1

Query: 46  SPAAQTPAPGP*ARAPTC*APW-----RATPAPPSTPTHCAVPAARASAWRAPPPTPTRP 210
           SPA   P+P P AR P C AP      R +PA PS P+   VP  R+      PP+   P
Sbjct: 342 SPAPACPSPSPPARPPPC-APCPSPQQRRSPASPSCPS--PVPQRRSPV----PPSCQSP 394

Query: 211 AP-RQSPVAPPAPRPRPDPATLPGRASLSSGAIRR----HCHRRRRGRRAH 348
           +P R+SPV P  P P+P P   PG  +L+     +    H     +GRR++
Sbjct: 395 SPQRRSPVPPSCPAPQPRPPPPPGERTLAERVYAKPPSHHAKAGFQGRRSY 445



EST assemble image


clone accession position
1 MX207b04_r BP089427 1 407
2 CM091a04_r AV397534 265 732
3 CM028d11_r AV387714 310 951
4 LC067g07_r AV623724 563 1086
5 CM095g12_r AV392717 624 1009




Chlamydomonas reinhardtii
Kazusa DNA Research Institute