Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000821A_C01 KCC000821A_c01
(470 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB02349.1| gene_id:MIL23.11~ref|NP_006775.1~strong similari... 63 2e-09
ref|NP_188791.2| transducin / WD-40 repeat protein family [Arabi... 63 2e-09
ref|NP_013230.1| part of small (ribosomal) subunit (SSU) process... 49 2e-05
emb|CAA61707.1| L3116 [Saccharomyces cerevisiae] 49 2e-05
pir||T18234 beta transducin homolog - yeast (Candida albicans) g... 44 0.001
>dbj|BAB02349.1| gene_id:MIL23.11~ref|NP_006775.1~strong similarity to unknown
protein [Arabidopsis thaliana]
Length = 955
Score = 63.2 bits (152), Expect = 2e-09
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 MVKAYLRYEFSSAFGVISS-SANPAYDASGKLLFTSALECISVWNAKQGSLVRTLSPVVA 406
MVKAY RY+ +++FGVISS +N AYD++GK + ALE + +W+ +QG +TL+P
Sbjct: 1 MVKAYQRYDAATSFGVISSVDSNIAYDSTGKYVLAPALEKVGIWHVRQGVCSKTLTP--- 57
Query: 407 SSSGGSGSSAAVAEV 451
SS G S AV +
Sbjct: 58 -SSSRGGPSLAVTSI 71
>ref|NP_188791.2| transducin / WD-40 repeat protein family [Arabidopsis thaliana]
Length = 948
Score = 63.2 bits (152), Expect = 2e-09
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Frame = +2
Query: 230 MVKAYLRYEFSSAFGVISS-SANPAYDASGKLLFTSALECISVWNAKQGSLVRTLSPVVA 406
MVKAY RY+ +++FGVISS +N AYD++GK + ALE + +W+ +QG +TL+P
Sbjct: 1 MVKAYQRYDAATSFGVISSVDSNIAYDSTGKYVLAPALEKVGIWHVRQGVCSKTLTP--- 57
Query: 407 SSSGGSGSSAAVAEV 451
SS G S AV +
Sbjct: 58 -SSSRGGPSLAVTSI 71
>ref|NP_013230.1| part of small (ribosomal) subunit (SSU) processosome (contains U3
snoRNA); DOM34 Interacting Protein; Dip2p [Saccharomyces
cerevisiae] gi|3121995|sp|Q12220|DIP2_YEAST DOM34
interacting protein 2 gi|1363708|pir||S59317 DIP2
protein - yeast (Saccharomyces cerevisiae)
gi|995691|emb|CAA62640.1| L3116 [Saccharomyces
cerevisiae] gi|1256869|gb|AAB82375.1| Dip2p
[Saccharomyces cerevisiae] gi|1360539|emb|CAA97699.1|
DIP2 [Saccharomyces cerevisiae]
Length = 943
Score = 49.3 bits (116), Expect = 2e-05
Identities = 33/77 (42%), Positives = 46/77 (58%), Gaps = 12/77 (15%)
Frame = +2
Query: 230 MVKAYLRYEFSSAFGVISSSAN----PAYDASGK-----LLFTSALECISVWNAKQGSLV 382
MVK+Y R+E ++AFGVI+S+AN PA + L TSALE +++W+ K G LV
Sbjct: 1 MVKSYQRFEQAAAFGVIASNANCVWIPASSGNSNGSGPGQLITSALEDVNIWDIKTGDLV 60
Query: 383 RTLS---PVVASSSGGS 424
LS P AS + G+
Sbjct: 61 SKLSDGLPPGASDARGA 77
>emb|CAA61707.1| L3116 [Saccharomyces cerevisiae]
Length = 458
Score = 49.3 bits (116), Expect = 2e-05
Identities = 33/77 (42%), Positives = 46/77 (58%), Gaps = 12/77 (15%)
Frame = +2
Query: 230 MVKAYLRYEFSSAFGVISSSAN----PAYDASGK-----LLFTSALECISVWNAKQGSLV 382
MVK+Y R+E ++AFGVI+S+AN PA + L TSALE +++W+ K G LV
Sbjct: 1 MVKSYQRFEQAAAFGVIASNANCVWIPASSGNSNGSGPGQLITSALEDVNIWDIKTGDLV 60
Query: 383 RTLS---PVVASSSGGS 424
LS P AS + G+
Sbjct: 61 SKLSDGLPPGASDARGA 77
>pir||T18234 beta transducin homolog - yeast (Candida albicans)
gi|3859718|emb|CAA21992.1| beta transducin or WD domain
protein [Candida albicans]
Length = 981
Score = 43.5 bits (101), Expect = 0.001
Identities = 27/86 (31%), Positives = 44/86 (50%), Gaps = 8/86 (9%)
Frame = +2
Query: 230 MVKAYLRYEFSSAFGVISSSAN-----PAYDASGKLL---FTSALECISVWNAKQGSLVR 385
MVK+Y RY+ FGVI+S AN P+ S + TS LE I +W+ K G ++
Sbjct: 1 MVKSYNRYDQEKCFGVITSQANIVWLPPSETQSSTSMGRALTSGLEEILIWDIKTGEIMN 60
Query: 386 TLSPVVASSSGGSGSSAAVAEVTVMT 463
+S + S + ++ + V+ +T
Sbjct: 61 RMSDGLTPGSSNASTTVPPSPVSYLT 86
