KCC000817A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000817A_C01 KCC000817A_c01
gccgctgctacagccaagtacggcggtgctactgctgcgactagcggtgccggggcggct
ggtggtcgcagccggggcggCGGCTGGTGGTCTCGGCTGCGCGGGCGGCCGGGTTCGTGG
GACTGGCTGTGGAAGCTGACGCTGCTGTTCTGGGGGGAATTCCTGATCGTCAATCTGGTG
CGGGTGGTGCGGCGCGAGCTGCCGCTGCTGAGGACCCCGGCGGGCCGAGGGGCGCTGCTG
CGCAGCCGTGTCTTTCAGTCGGGCGTCAAGTACGCTCTGGCGCTAAGCACGGTTCTGCTG
CTCATCTTGGGTTTCAGCGAGCGACACGACACGCCCGAAGTCCGCCACTTCAGTGCCGCT
GTTCGGATTCGTCACGTGCGCACTCAGCATGTCGGAGCGGGTGGAGTGCGACTGTGAGCC
GCGTGAGCTTGTGGGTGCTGGGCACGGTGGTGGGCGGCACGCTTGTGGTTCGTGGTGATG
GTGGACACGCACCTGGCGGCCAACCCCTACGCCCTGCTCACCGTCATCTGCTCCTTCACA
TTCCTGGTGGGCATTGCCTCCAGCTACCCGCAGTTCCGCATGGCCATGGTTCTCACGCTC
ATCACCTTTGCCAGCGTGTCGCTGTGTCAGTACACCGGCACGTGCGTGCTCCACCGGCTC
GGCCCAGGTGTACGGCGCCCGCCTGCTGAGTGTGATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000817A_C01 KCC000817A_c01
         (697 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAK53449.1| unknown [Streptomyces aureofaciens]                     52  9e-06
emb|CAE02760.1| OSJNBb0085F13.7 [Oryza sativa (japonica cultivar...    51  2e-05
dbj|BAA21906.1| serine/threonine protein kinase [Streptomyces gr...    49  1e-04
ref|XP_317438.1| ENSANGP00000023635 [Anopheles gambiae] gi|30175...    39  1e-04
ref|XP_324404.1| predicted protein [Neurospora crassa] gi|289174...    48  1e-04

>gb|AAK53449.1| unknown [Streptomyces aureofaciens]
          Length = 579

 Score = 52.0 bits (123), Expect = 9e-06
 Identities = 57/229 (24%), Positives = 78/229 (33%), Gaps = 32/229 (13%)
 Frame = -2

Query: 606  GDERENHGHAELRVAGGNAHQECEGA----DDGEQGVGVGRQVRVHHHHEPQACRPP--- 448
            G  R   G A    A G+  + C GA    +    G G GR      +  PQ  RPP   
Sbjct: 350  GPRRSAPGRARRIRARGSRCRCCRGAGVEPEGPANGAGAGRPTATSGYARPQHARPPARA 409

Query: 447  -PCPAPTSSRGSQSHSTRSDMLSAHVTNPNSGTEVADFGRVVSLAETQDEQQNRA*RQSV 271
             P P P  +R + + +      ++  T P + +         + A T   +        V
Sbjct: 410  PPGPRPAPTRAASTPARTGSRPASPPTRPTAPSPAPAAPPRAAAAPTPARRPPPPPTPPV 469

Query: 270  LDARLKDTAAQQRPSA-----------------------RRGPQQRQLAPHHPHQIDDQE 160
              AR    A   RP +                       RR P  R   PHHP       
Sbjct: 470  PRARRGPAAGNGRPPSTRDRTAGTRAPASPPGAPPPVRRRRPPPPRAPPPHHP----SAR 525

Query: 159  FPPEQQRQLPQPVPRTRPPAQPR-PPAAAPAATTSRPGTASRSSSTAVL 16
             P  +    P+P PR    A+P  PP AAP  + + PG  S   S + L
Sbjct: 526  NPSARATPRPRPPPRPSAAARPEPPPRAAPGPSGTAPGPPSGPRSPSPL 574

 Score = 36.2 bits (82), Expect = 0.49
 Identities = 27/92 (29%), Positives = 35/92 (37%), Gaps = 10/92 (10%)
 Frame = -2

Query: 282 RQSVLDARLKDTAAQQRPSARRGPQQRQLAPHHPHQIDDQEFPPEQ----------QRQL 133
           R++ L A   D   +Q     R P QR+   H   +   QE PP +          QR+ 
Sbjct: 270 RRAPLGAATPDRQGEQDAHQSRLPGQRERVGHVQQRAGQQEGPPAERHRARADDPAQRRR 329

Query: 132 PQPVPRTRPPAQPRPPAAAPAATTSRPGTASR 37
            +P   T P   P  PA       S PG A R
Sbjct: 330 GRPPATTGPRTGPAGPAGPAGPRRSAPGRARR 361

 Score = 35.8 bits (81), Expect = 0.64
 Identities = 37/103 (35%), Positives = 39/103 (36%), Gaps = 8/103 (7%)
 Frame = -1

Query: 337 RACRVAR*NPR*AAEPCLAPERT*RPTERHGCA----AAP--LGPPGSSAAAARAA--PP 182
           R CR A   P   A    A     RPT   G A    A P    PPG   A  RAA  P 
Sbjct: 370 RCCRGAGVEPEGPANGAGAG----RPTATSGYARPQHARPPARAPPGPRPAPTRAASTPA 425

Query: 181 APD*RSGIPPRTAASASTASPTNPAARAAETTSRRPGCDHQPP 53
               R   PP    + S A    P A AA T +RRP     PP
Sbjct: 426 RTGSRPASPPTRPTAPSPAPAAPPRAAAAPTPARRPPPPPTPP 468

>emb|CAE02760.1| OSJNBb0085F13.7 [Oryza sativa (japonica cultivar-group)]
           gi|32489700|emb|CAE04615.1| OSJNBb0004G23.13 [Oryza
           sativa (japonica cultivar-group)]
          Length = 571

 Score = 50.8 bits (120), Expect = 2e-05
 Identities = 44/141 (31%), Positives = 57/141 (40%), Gaps = 7/141 (4%)
 Frame = -2

Query: 438 APTSSRGSQSHSTRSDMLSAH--VTNPNSGTEVADFGR-----VVSLAETQDEQQNRA*R 280
           A    R S+ ++ R  +  A   VTN  S    A  G+     V        E    A +
Sbjct: 218 AAADGRSSKENAVREIVRQARETVTNRKSKKNAAAIGKENASPVHHHHHCGKENAPPAAK 277

Query: 279 QSVLDARLKDTAAQQRPSARRGPQQRQLAPHHPHQIDDQEFPPEQQRQLPQPVPRTRPPA 100
           Q+     ++   A+Q+P A R P Q + AP  P        PP+QQR  P   P   PP 
Sbjct: 278 QAAAAPPMRAPLAEQQPHAPRLPLQPRPAPPPP--------PPQQQRAKPSRPPPPPPPL 329

Query: 99  QPRPPAAAPAATTSRPGTASR 37
            P P AAAP A   RP    R
Sbjct: 330 DPPPRAAAPPAKCKRPDGCER 350

>dbj|BAA21906.1| serine/threonine protein kinase [Streptomyces griseus]
          Length = 555

 Score = 48.5 bits (114), Expect = 1e-04
 Identities = 52/193 (26%), Positives = 69/193 (34%), Gaps = 19/193 (9%)
 Frame = -2

Query: 522 GEQGVGVGRQVRVHHHHEPQACRPPPCPAPTSS-RGSQSHSTRSDMLSAHVTNPNSGTEV 346
           G QG G G       H +P A  PP    P    +    H  +S + +A   N  +  + 
Sbjct: 344 GGQGPGGG-------HADPTAVLPPVPQRPDGPPQPDGPHPWQSQLQAARDRNEQTQVQY 396

Query: 345 ADFGRVVSLAETQDEQQNRA*RQSVLDARLKDTAAQQRPSARRGPQQRQLAPHH------ 184
            D         +QD  + R  RQ             Q P  ++ PQ+RQ +P H      
Sbjct: 397 LD--------PSQDPLRRRPQRQ-------------QPPHQQQPPQRRQPSPQHQQYPPQ 435

Query: 183 ------------PHQIDDQEFPPEQQRQLPQPVPRTRPPAQPRPPAAAPAATTSRPGTAS 40
                       P Q   Q++ P Q +Q  QP P  RPP +PRPP    A     PG   
Sbjct: 436 PQQPQRYQQPQQPQQPQRQQYAPPQPQQPQQPAP--RPPREPRPPRQRSANPMRIPG--- 490

Query: 39  RSSSTAVLGCSSG 1
                  LGC  G
Sbjct: 491 -------LGCLKG 496

>ref|XP_317438.1| ENSANGP00000023635 [Anopheles gambiae] gi|30175421|gb|EAA43906.1|
           ENSANGP00000023635 [Anopheles gambiae str. PEST]
          Length = 594

 Score = 38.9 bits (89), Expect(2) = 1e-04
 Identities = 31/127 (24%), Positives = 44/127 (34%), Gaps = 7/127 (5%)
 Frame = -2

Query: 459 CRPPPCPAPTSSRGSQSHSTRSDMLSAHVTNP-----NSGTEVADFGRVVSLAETQDEQQ 295
           C P   P+P     S    T +  ++    +P      + T  +  G   + + T+DE  
Sbjct: 7   CSPQSAPSPPHHHHSSQSPTSTTTVTMATASPVPACTTTTTTTSTSGASAASSPTRDEMS 66

Query: 294 NRA*RQSVLDARLKDTAAQQRPSARRGPQQRQLAPHH--PHQIDDQEFPPEQQRQLPQPV 121
                   L   +     +Q P    GP   Q   HH  PH       P  Q     QP 
Sbjct: 67  --------LVVPISPLHIKQEPLGSDGPMPAQPPHHHQHPHHHQLPHHPHHQHHPQQQPS 118

Query: 120 PRTRPPA 100
           P+T PPA
Sbjct: 119 PQTSPPA 125

 Score = 28.9 bits (63), Expect(2) = 1e-04
 Identities = 11/28 (39%), Positives = 16/28 (56%)
 Frame = -3

Query: 101 RSRDHQPPPRLRPPAAPAPLVAAVAPPY 18
           + + H  PP +R P +P P+  AV  PY
Sbjct: 147 QQQPHPQPPAIREPISPGPIHPAVLLPY 174

>ref|XP_324404.1| predicted protein [Neurospora crassa] gi|28917485|gb|EAA27185.1|
            predicted protein [Neurospora crassa]
          Length = 2992

 Score = 48.1 bits (113), Expect = 1e-04
 Identities = 53/192 (27%), Positives = 77/192 (39%), Gaps = 15/192 (7%)
 Frame = -2

Query: 531  ADDGEQGVGVGRQVRVHHHHEPQ-------ACRPPPCPAPTSSRGSQSHSTRSDMLSAHV 373
            A  G +G G G          P        A  P P PAP  SR +++ ++ + + +A +
Sbjct: 2502 ASRGGRGAGAGAGAGAASSAAPDDPFAPAPAPAPAPAPAPAPSRTTRARASAAPVPAAPI 2561

Query: 372  TNPNSGTEVA-DFGRVVSL-AETQDEQQNRA*RQSVLDARLKDTAAQQRPSARRGPQQRQ 199
            T        A D      L A+ Q+E+  R   +   D +L    A  R + R    Q Q
Sbjct: 2562 TRSTRNRPAAHDSDEEAQLVAQLQEEEARREAERQQADEQLAARRAA-RAARRDAVAQAQ 2620

Query: 198  LAPHHPHQIDDQEFPPEQQRQLPQP-VPRTRP-----PAQPRPPAAAPAATTSRPGTASR 37
             AP           P   QR  PQP VP  +P     PA+  P +AAPA+  +RP +   
Sbjct: 2621 PAPTPA----PAPAPATAQRPAPQPRVPAQQPSRAADPAKQAPRSAAPASQAARPASTRP 2676

Query: 36   SSSTAVLGCSSG 1
            + +      SSG
Sbjct: 2677 AGTVPSQPRSSG 2688



EST assemble image


clone accession position
1 CL70c07_r AV396835 1 481
2 HCL058h06_r AV642831 345 697




Chlamydomonas reinhardtii
Kazusa DNA Research Institute