KCC000811A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000811A_C01 KCC000811A_c01
aaGAAGCCTCGCCCTAGGACTCGACTTTGCACACTGTCTTCAGTTTATCGCAGCGAGACG
GCAGACTCGGTCAATCCCGAGCAGAGCAGTCTTCACGCACGTTTGCCACCTTTCCGACCG
CCATTCAAAAATGTTGAGTCTTCCGAAGTCCACAAAAAGCTCGTTAGGACGTCTAGGTGT
AGGCCTCGGCGTTGGCCTAGTGCTCGGCGTGGGAGTTATAGGTTTCCTGCGCCACCGCCG
CAACCAGGCCGCAAAGCTCCTCCACCTGCAGCAAGAGCGGATTGTTACCTCAAGCGTCGC
GGCTAAGTCGTCGCCGGCTCCGGACGCGTGCGCAAGCGACTGCGCCAGCGATGAAGCGCG
ACCGGCGCCCTGTGCGCAGCCCGATGACTGCGTGCTCGCCGGGTCAGCCGCTGCTCTGGA
CGACTGTGCGGAGAGCCGGAGTAACAGCAGTGACAGTAGCGACAGTGACGGCGAGGCGCC
GTCGCCTTCGGGCCGACAGAGCCTCGCCACGTTCCTGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000811A_C01 KCC000811A_c01
         (519 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_824002.1| hypothetical protein [Streptomyces avermitilis ...    39  0.031
sp|P10323|ACRO_HUMAN Acrosin precursor gi|105195|pir||S11674 acr...    38  0.089
ref|NP_001088.1| acrosin precursor; proacrosin [Homo sapiens] gi...    38  0.089
gb|AAA51575.1| acrosin                                                 38  0.089
pir||EDBEIF immediate-early protein IE180 - suid herpesvirus 1 (...    37  0.12

>ref|NP_824002.1| hypothetical protein [Streptomyces avermitilis MA-4680]
           gi|29606475|dbj|BAC70537.1| hypothetical protein
           [Streptomyces avermitilis MA-4680]
          Length = 432

 Score = 39.3 bits (90), Expect = 0.031
 Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
 Frame = +2

Query: 197 LVLGVGVIGFLRHRRNQAAKLLHLQQE-----RIVTSSVAAKSSPAPDACASDCASDE-- 355
           +++G+G    L    +Q      L  E       +    +A ++P+P A ASD ASD+  
Sbjct: 51  VLMGMGFTPTLAQADDQPLSKSELADEYKNCVAALEDGASASATPSPSASASDDASDKGD 110

Query: 356 -ARPAPCAQPDDCVLAGSAAALDDCAE---SRSNSSDSSDSDGEAPSPSGRQSLAT 511
            A P+P A       + S +  DD AE   S S S+ SS +     S  G  S AT
Sbjct: 111 SAEPSPSASASSDKTSSSDSGSDDKAEPTPSASASASSSSAGTSDKSSGGDTSTAT 166

>sp|P10323|ACRO_HUMAN Acrosin precursor gi|105195|pir||S11674 acrosin (EC 3.4.21.10)
           precursor - human gi|1216165|emb|CAA37964.1|
           preproacrosin [Homo sapiens] gi|2654277|emb|CAA46956.1|
           proacrosin [Homo sapiens]
          Length = 421

 Score = 37.7 bits (86), Expect = 0.089
 Identities = 22/58 (37%), Positives = 28/58 (47%)
 Frame = +1

Query: 100 RLPPFRPPFKNVESSEVHKKLVRTSRCRPRRWPSARRGSYRFPAPPPQPGRKAPPPAA 273
           R PP RPPF +  S+ +        R  P R P+A+      P PPP P    PPPA+
Sbjct: 308 RPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQ------PPPPPSPPPPPPPPAS 359

>ref|NP_001088.1| acrosin precursor; proacrosin [Homo sapiens]
           gi|28326|emb|CAA68784.1| unnamed protein product [Homo
           sapiens]
          Length = 421

 Score = 37.7 bits (86), Expect = 0.089
 Identities = 22/58 (37%), Positives = 28/58 (47%)
 Frame = +1

Query: 100 RLPPFRPPFKNVESSEVHKKLVRTSRCRPRRWPSARRGSYRFPAPPPQPGRKAPPPAA 273
           R PP RPPF +  S+ +        R  P R P+A+      P PPP P    PPPA+
Sbjct: 308 RPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQ------PRPPPSPPPPPPPPAS 359

>gb|AAA51575.1| acrosin
          Length = 184

 Score = 37.7 bits (86), Expect = 0.089
 Identities = 22/58 (37%), Positives = 28/58 (47%)
 Frame = +1

Query: 100 RLPPFRPPFKNVESSEVHKKLVRTSRCRPRRWPSARRGSYRFPAPPPQPGRKAPPPAA 273
           R PP RPPF +  S+ +        R  P R P+A+      P PPP P    PPPA+
Sbjct: 71  RPPPIRPPFSHPISAHLPWYFQPPPRPLPPRPPAAQ------PPPPPSPPPPPPPPAS 122

>pir||EDBEIF immediate-early protein IE180 - suid herpesvirus 1 (strain
           Indiana-Funkhauser)
          Length = 1460

 Score = 37.4 bits (85), Expect = 0.12
 Identities = 17/34 (50%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = +1

Query: 187 RRWPSARRGSYRFPAPPPQPGRK------APPPA 270
           +RWP  R G    P PPP PGR       APPPA
Sbjct: 225 QRWPQRRHGGGPLPQPPPPPGRSRRPAAAAPPPA 258



EST assemble image


clone accession position
1 LCL082a10_r AV630648 1 455
2 CL69a06_r AV396787 3 519
3 LCL004c07_r AV626208 7 161




Chlamydomonas reinhardtii
Kazusa DNA Research Institute