Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000809A_C01 KCC000809A_c01
(826 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAE05369.1| OJ000315_02.14 [Oryza sativa (japonica cultivar-... 114 1e-24
gb|AAK59865.1| AT5g51070/K3K7_27 [Arabidopsis thaliana] 107 3e-22
ref|NP_568750.1| ATP-dependent Clp protease ATP-binding subunit ... 107 3e-22
gb|AAN78327.1| ATP-dependent Clp protease ATP-binding subunit pr... 105 1e-21
emb|CAE05151.1| OSJNBa0039C07.7 [Oryza sativa (japonica cultivar... 97 2e-19
>emb|CAE05369.1| OJ000315_02.14 [Oryza sativa (japonica cultivar-group)]
Length = 877
Score = 114 bits (286), Expect = 1e-24
Identities = 81/229 (35%), Positives = 118/229 (51%), Gaps = 12/229 (5%)
Frame = +3
Query: 126 PVARMMRSIALTASRGGPRAAAPQQLAMASKLPRPQRATV--------NRRQALKVQAVF 281
P A ++ + A R P A A+A RP RA+ RR + V+AVF
Sbjct: 12 PSASILATGAGLRRRFSPAGAGGGGRAVAVAAGRPIRASAALLAAPAPRRRGGVVVRAVF 71
Query: 282 ERFTERSIKTVMIAQAEAKAFGHTEVNTEHILLGLVAEESLSKNGYLNSGVSSERAKAAV 461
ERFTER++K V+ +Q EA+ G V H+LLGLVAE+ S G+L SGV ERA+ A
Sbjct: 72 ERFTERAVKAVVFSQREARGMGDETVAPHHLLLGLVAEDR-SPLGFLASGVRVERAREAC 130
Query: 462 EALFGR----KRPVSHGESIPFSREVRKMFENATHECKRSNVNWISPEHILLAMLSMPDC 629
A G+ + PV +PFS +++FE A + N+ISPEHI L + ++ D
Sbjct: 131 RAAVGKEGLAQAPVGLATDVPFSGASKRVFEAAVEFSRNMGCNFISPEHIALGLFNLNDP 190
Query: 630 NGKRVLHSLSADVEGLKAEAGKRLKGDTDAEQAKKKQGAAAKEQGPKMT 776
VL SL D L +A R++G+ A+ ++ G ++ + K T
Sbjct: 191 TTNNVLKSLGVDSSQLAKQALTRVQGEL-AKDGREPVGLSSFKVREKFT 238
>gb|AAK59865.1| AT5g51070/K3K7_27 [Arabidopsis thaliana]
Length = 640
Score = 107 bits (266), Expect = 3e-22
Identities = 69/226 (30%), Positives = 114/226 (49%), Gaps = 27/226 (11%)
Frame = +3
Query: 228 PQRATVNRRQALKVQAVFERFTERSIKTVMIAQAEAKAFGHTEVNTEHILLGLVAEESLS 407
PQR R++ + AVFERFTER+I+ ++ +Q EAK+ G V T+H+LLGL+AE+
Sbjct: 66 PQR---KRKKFTPISAVFERFTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDR-D 121
Query: 408 KNGYLNSGVSSERAKAAVEALFGRKRPVSHGE-----------SIPFSREVRKMFENATH 554
G+L SG++ ++A+ AV +++ S E +PFS +++FE A
Sbjct: 122 PQGFLGSGITIDKAREAVWSIWDEANSDSKQEEASSTSYSKSTDMPFSISTKRVFEAAVE 181
Query: 555 ECKRSNVNWISPEHILLAMLSMPDCNGKRVLHSLSADVEGLKAEAGKRLKGDTDAEQAKK 734
+ + +I+PEHI + + ++ D + RVL L A++ L A A RLKG+ + +
Sbjct: 182 YSRTMDCQYIAPEHIAVGLFTVDDGSAGRVLKRLGANMNLLTAAALTRLKGEIAKDGREP 241
Query: 735 KQGAAAKEQGP----------------KMTEEYCKDLCAEVRAGRI 824
+ + P + E++C DL A G I
Sbjct: 242 SSSSKGSFESPPSGRIAGSGPGGKKAKNVLEQFCVDLTARASEGLI 287
>ref|NP_568750.1| ATP-dependent Clp protease ATP-binding subunit (ClpD), ERD1 protein
precursor [Arabidopsis thaliana]
gi|1169544|sp|P42762|ERD1_ARATH ERD1 protein,
chloroplast precursor gi|541859|pir||JN0901
endopeptidase Clp ATP-binding chain C - Arabidopsis
thaliana gi|497629|dbj|BAA04506.1| ERD1 protein
[Arabidopsis thaliana] gi|14334878|gb|AAK59617.1|
putative ATP-dependent Clp protease ATP-binding subunit
ClpD, ERD1 protein precursor [Arabidopsis thaliana]
gi|22136916|gb|AAM91802.1| putative ATP-dependent Clp
protease ATP-binding subunit ClpD, ERD1 protein
precursor [Arabidopsis thaliana]
Length = 945
Score = 107 bits (266), Expect = 3e-22
Identities = 69/226 (30%), Positives = 114/226 (49%), Gaps = 27/226 (11%)
Frame = +3
Query: 228 PQRATVNRRQALKVQAVFERFTERSIKTVMIAQAEAKAFGHTEVNTEHILLGLVAEESLS 407
PQR R++ + AVFERFTER+I+ ++ +Q EAK+ G V T+H+LLGL+AE+
Sbjct: 66 PQR---KRKKFTPISAVFERFTERAIRAIIFSQKEAKSLGKDMVYTQHLLLGLIAEDR-D 121
Query: 408 KNGYLNSGVSSERAKAAVEALFGRKRPVSHGE-----------SIPFSREVRKMFENATH 554
G+L SG++ ++A+ AV +++ S E +PFS +++FE A
Sbjct: 122 PQGFLGSGITIDKAREAVWSIWDEANSDSKQEEASSTSYSKSTDMPFSISTKRVFEAAVE 181
Query: 555 ECKRSNVNWISPEHILLAMLSMPDCNGKRVLHSLSADVEGLKAEAGKRLKGDTDAEQAKK 734
+ + +I+PEHI + + ++ D + RVL L A++ L A A RLKG+ + +
Sbjct: 182 YSRTMDCQYIAPEHIAVGLFTVDDGSAGRVLKRLGANMNLLTAAALTRLKGEIAKDGREP 241
Query: 735 KQGAAAKEQGP----------------KMTEEYCKDLCAEVRAGRI 824
+ + P + E++C DL A G I
Sbjct: 242 SSSSKGSFESPPSGRIAGSGPGGKKAKNVLEQFCVDLTARASEGLI 287
>gb|AAN78327.1| ATP-dependent Clp protease ATP-binding subunit precursor [Oryza
sativa (indica cultivar-group)]
Length = 938
Score = 105 bits (261), Expect = 1e-21
Identities = 67/182 (36%), Positives = 103/182 (55%), Gaps = 8/182 (4%)
Frame = +3
Query: 231 QRATVNRRQALKVQAVFERFTERSIKTVMIAQAEAKAFGHTEVNTEHILLGLVAEESLSK 410
Q+A R + V+AVFERFTER++K V+++Q EAK G V H+LLGL+AE+ S
Sbjct: 58 QQAGARRARRAVVRAVFERFTERAVKAVVLSQREAKGLGEGAVAPRHLLLGLIAEDR-SA 116
Query: 411 NGYLNSGVSSERAK------AAVEALFGRKRPVSHG--ESIPFSREVRKMFENATHECKR 566
G+L+SG++ ERA+ A + G P G IPFS +++FE A +
Sbjct: 117 GGFLSSGINIERAREECRGIGARDLTPGAPSPSGSGLEMDIPFSGSCKRVFEVAVEFSRN 176
Query: 567 SNVNWISPEHILLAMLSMPDCNGKRVLHSLSADVEGLKAEAGKRLKGDTDAEQAKKKQGA 746
++ISPEH+ LA+ ++ D +L SL AD L + A RL+ + A+ ++ GA
Sbjct: 177 MGCSFISPEHLALALFTLDDPTTNSLLRSLGADPSQLASVALTRLQAEL-AKDGREPAGA 235
Query: 747 AA 752
++
Sbjct: 236 SS 237
>emb|CAE05151.1| OSJNBa0039C07.7 [Oryza sativa (japonica cultivar-group)]
Length = 888
Score = 97.4 bits (241), Expect = 2e-19
Identities = 64/189 (33%), Positives = 100/189 (52%), Gaps = 3/189 (1%)
Frame = +3
Query: 267 VQAVFERFTERSIKTVMIAQAEAKAFGHTEVNTEHILLGLVAE-ESLSKNGYLNSGVSSE 443
V+A+FERFTE++IK +M+AQ EA+ GH V TE ILLGL+ E ++ + G++ +
Sbjct: 54 VRAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLK 113
Query: 444 RAKAAVEALFGRKRPVSHGESIPFSREVRKMFENATHECKRSNVNWISPEHILLAMLSMP 623
A+ VE + GR E IPF+ +++ E + E ++ N+I EH+LL +L
Sbjct: 114 DARVEVEKIIGRGSGFVAVE-IPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREG 172
Query: 624 DCNGKRVLHSLSADVEGLKAEAGKRLKGDTDAEQAKKKQGAAAKEQGPKM--TEEYCKDL 797
+ RVL SL AD ++ + + + T+A A G G KM EEY +L
Sbjct: 173 EGVAARVLESLGADPNNIRTQVIRMVGESTEAVGA----GVGGGSSGQKMPTLEEYGTNL 228
Query: 798 CAEVRAGRI 824
G++
Sbjct: 229 TKLAEEGKL 237
