Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000805A_C01 KCC000805A_c01
(984 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC84559.1| putative polynucleotide phosphorylase [Oryza sat... 245 1e-63
gb|AAC49669.1| polyribonucleotide phophorylase 236 6e-61
pir||S64680 exoribonuclease 100 RNP - spinach 236 6e-61
prf||2208281A 100RNP protein 231 1e-59
pir||T06540 polyribonucleotide nucleotidyltransferase (EC 2.7.7.... 229 4e-59
>dbj|BAC84559.1| putative polynucleotide phosphorylase [Oryza sativa (japonica
cultivar-group)]
Length = 902
Score = 245 bits (625), Expect = 1e-63
Identities = 127/266 (47%), Positives = 177/266 (65%)
Frame = +3
Query: 180 GMPAVFSSLATGSRSAVHAASSICSSSGANARTSLRRMRALPGRRGMHIAAQLAPATYAP 359
G+PA L R A A++S GA R + R+RA G + + A + P
Sbjct: 30 GVPAALLPLPRPRRVAASASTS--RRGGARRRAAGARVRASVGEEAPPVVTEEASTSGGP 87
Query: 360 PKADAVILTLPGGKEIKLETGEIGRQANGAIMATAGETMLYATACCSASPTGDGSFTPLT 539
K I G + I +ETG IGRQA+ ++M T GET++Y++ C + +P F P++
Sbjct: 88 TKFSTKIPV--GDRHILVETGHIGRQASASVMVTDGETIVYSSVCLADTPNDPSDFFPMS 145
Query: 540 VNYAERFSAAGRTSGGFVKRDGRPRDAEVLVSRLVDRPIRPMFAKGWANDTQILEWVLSY 719
V+Y ER SAAGRTSGGF KR+GR +D EVLV RL+DRP+RP KG+ +TQIL WV SY
Sbjct: 146 VHYQERLSAAGRTSGGFFKREGRAKDHEVLVCRLIDRPLRPTMPKGFYYETQILSWVFSY 205
Query: 720 DGVNDPEPLAITAAAAALLISDIPLKKAVAGVRVGMSADGGFIINPTVEEMETSRLDLMV 899
DG++ P+ LAITAA A+ +S++P K+ +AGVRVGM D F++NPT E+M+ S LDL++
Sbjct: 206 DGIHSPDSLAITAAGVAMALSEVPNKQTIAGVRVGMIND-QFVVNPTTEQMDDSELDLVM 264
Query: 900 AGTRDAVLMIEGFCDFLTEEQMIEAL 977
AGT A+LMIEG+CDFLTEE++++A+
Sbjct: 265 AGTDSAILMIEGYCDFLTEEKLLQAV 290
>gb|AAC49669.1| polyribonucleotide phophorylase
Length = 822
Score = 236 bits (601), Expect = 6e-61
Identities = 115/195 (58%), Positives = 149/195 (75%)
Frame = +3
Query: 393 GGKEIKLETGEIGRQANGAIMATAGETMLYATACCSASPTGDGSFTPLTVNYAERFSAAG 572
G + I +ETG IGRQA+GA+ T GET++Y T C S P+ F PL+VNY ERFSAAG
Sbjct: 85 GDRHILVETGHIGRQASGAVTVTDGETIVYTTVCMSDIPSEPSDFFPLSVNYQERFSAAG 144
Query: 573 RTSGGFVKRDGRPRDAEVLVSRLVDRPIRPMFAKGWANDTQILEWVLSYDGVNDPEPLAI 752
RTSGGF KR+GRP+D EVLV RL+DRP+R KG+ ++TQIL WVLSYDG++ P+ LA+
Sbjct: 145 RTSGGFFKREGRPKDNEVLVCRLIDRPLRTTMLKGFYHETQILSWVLSYDGLHPPDALAV 204
Query: 753 TAAAAALLISDIPLKKAVAGVRVGMSADGGFIINPTVEEMETSRLDLMVAGTRDAVLMIE 932
TAA A+ +S++P K VAGVRVG+ G +I+NPT EME S LDL+VAGT A+LMIE
Sbjct: 205 TAAGIAVALSELPHTKPVAGVRVGL-VGGKYIVNPTTNEMENSELDLVVAGTDSAILMIE 263
Query: 933 GFCDFLTEEQMIEAL 977
G+C+FL EE+++EA+
Sbjct: 264 GYCNFLPEEKLLEAV 278
>pir||S64680 exoribonuclease 100 RNP - spinach
Length = 779
Score = 236 bits (601), Expect = 6e-61
Identities = 115/195 (58%), Positives = 149/195 (75%)
Frame = +3
Query: 393 GGKEIKLETGEIGRQANGAIMATAGETMLYATACCSASPTGDGSFTPLTVNYAERFSAAG 572
G + I +ETG IGRQA+GA+ T GET++Y T C S P+ F PL+VNY ERFSAAG
Sbjct: 83 GDRHILVETGHIGRQASGAVTVTDGETIVYTTVCMSDIPSEPSDFFPLSVNYQERFSAAG 142
Query: 573 RTSGGFVKRDGRPRDAEVLVSRLVDRPIRPMFAKGWANDTQILEWVLSYDGVNDPEPLAI 752
RTSGGF KR+GRP+D EVLV RL+DRP+R KG+ ++TQIL WVLSYDG++ P+ LA+
Sbjct: 143 RTSGGFFKREGRPKDNEVLVCRLIDRPLRTTMLKGFYHETQILSWVLSYDGLHPPDALAV 202
Query: 753 TAAAAALLISDIPLKKAVAGVRVGMSADGGFIINPTVEEMETSRLDLMVAGTRDAVLMIE 932
TAA A+ +S++P K VAGVRVG+ G +I+NPT EME S LDL+VAGT A+LMIE
Sbjct: 203 TAAGIAVALSELPHTKPVAGVRVGL-VGGKYIVNPTTNEMENSELDLVVAGTDSAILMIE 261
Query: 933 GFCDFLTEEQMIEAL 977
G+C+FL EE+++EA+
Sbjct: 262 GYCNFLPEEKLLEAV 276
>prf||2208281A 100RNP protein
Length = 779
Score = 231 bits (590), Expect = 1e-59
Identities = 114/195 (58%), Positives = 148/195 (75%)
Frame = +3
Query: 393 GGKEIKLETGEIGRQANGAIMATAGETMLYATACCSASPTGDGSFTPLTVNYAERFSAAG 572
G + I +ETG IGRQA+GA+ T GET++Y T C S P+ F PL+VNY ERFSAAG
Sbjct: 83 GDRHILVETGHIGRQASGAVTVTDGETIVYTTVCMSDIPSEPSDFFPLSVNYQERFSAAG 142
Query: 573 RTSGGFVKRDGRPRDAEVLVSRLVDRPIRPMFAKGWANDTQILEWVLSYDGVNDPEPLAI 752
RTSGGF KR+GRP+D EVLV RL+DRP+R KG+ ++TQIL WVLSYDG++ P+ LA+
Sbjct: 143 RTSGGFFKREGRPKDNEVLVCRLIDRPLRTTMLKGFYHETQILSWVLSYDGLHPPDALAV 202
Query: 753 TAAAAALLISDIPLKKAVAGVRVGMSADGGFIINPTVEEMETSRLDLMVAGTRDAVLMIE 932
TAA A+ +S++ K VAGVRVG+ G +I+NPT EME S LDL+VAGT A+LMIE
Sbjct: 203 TAAGIAVALSELFHTKPVAGVRVGL-VGGKYIVNPTTNEMENSELDLVVAGTDSAILMIE 261
Query: 933 GFCDFLTEEQMIEAL 977
G+C+FL EE+++EA+
Sbjct: 262 GYCNFLPEEKLLEAV 276
>pir||T06540 polyribonucleotide nucleotidyltransferase (EC 2.7.7.8) - garden pea
gi|2286200|gb|AAC50039.1| polynucleotide phosphorylase
[Pisum sativum]
Length = 897
Score = 229 bits (585), Expect = 4e-59
Identities = 112/195 (57%), Positives = 149/195 (75%)
Frame = +3
Query: 393 GGKEIKLETGEIGRQANGAIMATAGETMLYATACCSASPTGDGSFTPLTVNYAERFSAAG 572
G + +ETG +GRQA+G++ T GET++Y T C + +P+ F PL+VNY ERFSAAG
Sbjct: 94 GDRHTLVETGHMGRQASGSVTVTDGETIVYTTVCLNDTPSEPSDFFPLSVNYQERFSAAG 153
Query: 573 RTSGGFVKRDGRPRDAEVLVSRLVDRPIRPMFAKGWANDTQILEWVLSYDGVNDPEPLAI 752
RTSGGF KR+G+ +D EVL+ RL+DRP+RP KG+ ++TQIL WVLSYDG + P+ LAI
Sbjct: 154 RTSGGFFKREGKTKDHEVLICRLIDRPLRPTMPKGFYHETQILSWVLSYDGSHAPDALAI 213
Query: 753 TAAAAALLISDIPLKKAVAGVRVGMSADGGFIINPTVEEMETSRLDLMVAGTRDAVLMIE 932
TAA AL +S+IP KAVAGVRVG+ D +I+NPT EEME S LDLM+AGT A+LMIE
Sbjct: 214 TAAGIALALSEIPTSKAVAGVRVGLIGD-KYIVNPTAEEMENSELDLMLAGTDSAILMIE 272
Query: 933 GFCDFLTEEQMIEAL 977
G+ +FL EE++++A+
Sbjct: 273 GYGNFLPEEKLLKAV 287
