Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000803A_C01 KCC000803A_c01
(535 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00056617.1| COG1071: Pyruvate/2-oxoglutarate dehydrogenas... 37 0.16
gb|AAK38151.1| ADAM precursor [Strongylocentrotus purpuratus] 36 0.28
ref|NP_251715.1| probable FAD-dependent glycerol-3-phosphate deh... 35 0.61
ref|ZP_00087402.1| COG0583: Transcriptional regulator [Pseudomon... 35 0.80
ref|NP_894567.1| conserved hypothetical protein [Prochlorococcus... 34 1.0
>ref|ZP_00056617.1| COG1071: Pyruvate/2-oxoglutarate dehydrogenase complex,
dehydrogenase (E1) component, eukaryotic type, alpha
subunit [Magnetospirillum magnetotacticum]
Length = 311
Score = 37.0 bits (84), Expect = 0.16
Identities = 23/67 (34%), Positives = 30/67 (44%)
Frame = -2
Query: 417 AALPENLCVGGLSSVRVSYPNALRCYVE*ALSRLYCVKCGSALASTLCGSGARTSRIVTA 238
A P+ L G L S+ +S P Y L CV G+A+A T+ GSGA +
Sbjct: 87 ALRPDGLAGGRLGSMNMSNPGRGLIYTSSILGNDLCVAAGAAMAETVLGSGAVPFVVTGD 146
Query: 237 GVRSAGV 217
G GV
Sbjct: 147 GALEEGV 153
>gb|AAK38151.1| ADAM precursor [Strongylocentrotus purpuratus]
Length = 1023
Score = 36.2 bits (82), Expect = 0.28
Identities = 40/123 (32%), Positives = 53/123 (42%), Gaps = 17/123 (13%)
Frame = +2
Query: 38 AAGPLPFAPEG-----RQLAAPTRGGEGPMVHCRR---GLATLPTCMHAP-----ATHDD 178
A+G P AP+ R AP R E P+VH A PT AP A
Sbjct: 800 ASGAPPAAPQAAMRPARTAPAPLRSQETPIVHRPAPPVSQAKKPTASIAPLKVETAPKPS 859
Query: 179 R*PHFHCHPNSHPTPADLTPAVTILLV----LAPEPHSVLASADPHFTQYSLLNAYST*Q 346
R P N P+PA P+V++ + +AP+P SV +SA P F + A +T
Sbjct: 860 RPP---VPLNKPPSPAKSPPSVSVPVPKGIRVAPKPPSVHSSAKPQFRLPPPIEASTTKP 916
Query: 347 RNA 355
NA
Sbjct: 917 ANA 919
>ref|NP_251715.1| probable FAD-dependent glycerol-3-phosphate dehydrogenase
[Pseudomonas aeruginosa PA01] gi|11351280|pir||F83268
probable FAD-dependent glycerol-3-phosphate
dehydrogenase PA3025 [imported] - Pseudomonas aeruginosa
(strain PAO1) gi|9949128|gb|AAG06413.1|AE004727_9
probable FAD-dependent glycerol-3-phosphate
dehydrogenase [Pseudomonas aeruginosa PAO1]
Length = 526
Score = 35.0 bits (79), Expect = 0.61
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Frame = +1
Query: 19 RCSSM---TGCWATAFRSRGAPAGGSHSR-WRGAHGSLPSWTCHVAHMYA 156
RC ++ TG WA R P G H R RG+H LP+W VAH ++
Sbjct: 220 RCRALALATGAWADELRQ---PGGSEHIRPLRGSHLLLPAWRLPVAHAFS 266
>ref|ZP_00087402.1| COG0583: Transcriptional regulator [Pseudomonas fluorescens PfO-1]
Length = 489
Score = 34.7 bits (78), Expect = 0.80
Identities = 23/60 (38%), Positives = 29/60 (48%), Gaps = 6/60 (10%)
Frame = -3
Query: 182 SGHHGLPAHAYMWATWQVHDGSEPWAPRHREWEPPAGAPLERKA------VAQQPVMLLH 21
S HHG P Y W + DGSE + +HR G P+ R A VAQ P+ L+H
Sbjct: 371 SAHHGSPQQVYSWTLFH-QDGSE-FTLQHRPQLITKGLPMLRCAAIDSVGVAQMPMSLVH 428
>ref|NP_894567.1| conserved hypothetical protein [Prochlorococcus marinus str. MIT
9313] gi|33634924|emb|CAE20910.1| conserved hypothetical
protein [Prochlorococcus marinus str. MIT 9313]
Length = 581
Score = 34.3 bits (77), Expect = 1.0
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Frame = +3
Query: 153 CMRRQPMMTANPTSIAIQTLIRRLLT*RLQSLSC-SFLRRSHTAYLPV-------PIHTS 308
C R P+ NP+ + + I L++ L +L+C S + +Y+P+ P++ S
Sbjct: 13 CSRLSPLNVTNPSGLKVSQKISLLVSLSLSTLACESGFAKPSWSYVPLMAGQSARPLNGS 72
Query: 309 HNTVCLTPILHSN 347
N V P+LHSN
Sbjct: 73 FNKV---PVLHSN 82
