KCC000795A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000795A_C01 KCC000795A_c01
TAACTCTTAATATAGTATCAATACGCTCTGGTAGGCAAAAATGGTCGCTAAGATTGGTGC
CCCCGCTCCCAAGTTCAAGGCCCAGGCGGTCGTGAACGGCGAGATCAAGGAGATCAGCCT
GGATGACTACAAGGGCAAGTACGTGGTGCTCTTCTTCTACCCTCTGGACTTCACCTTCGT
GTGCCCCACAGAGATCGTGGCCTTCTCTGATCGTGTGGAGGAGTTCCGCGCCATCAACAC
CGAGGTTATCGGCGCCAGCATTGACAGCCAGTTCACCCACCTGGCCTTCAGCAACACCCC
CCGCACCAAGGGTGGCCTGGGCGGCTGCAAGTACCCCCTGGTGGCTGACCTGACCAAGCA
GATTGCCAAGGACTACGGTGTCCTGATTGAGGACGGCCCCGACGCCGGCGTCACCCTGCG
CGGCCTGTTCATCATCAGCCCCACCGGCGTCCTGCGCCAGATCACCATCAACGACCTGCC
CGTGGGCCGCAGCGTGGACGAGACCCTGCGCCTGGTCAAGGCCTTCCAGTTCACCGACGA
GCACGGCGAGGTGTGCCCGGCCAACTGGAACCCGGCGCCAAGACCATGAAGGCCGACCCC
ACCAAGTCGCTGGAGTACTTCTCCACGCTGTCGTAAAGCAACTCGCCCCACTAGGAGGAG
TTTGTTGCGGAGGGTCGATGGTCGTTGTGAGTTGATGTGGACGTTGGCGGACTCGGCCTT
GGCGGATGAGAGCAGGATTTGGTGCCCAGGAAGCAGACGGGAGTGCGTTCTGCGCACAGG
CTGTGCTCGTGTGCTTCAGGACGGACGCCTATGACTGCCGGGTCGCAGGATGGGTTGCAT
AGTGCGCAATGCACTTGCTTAATGGGTAATGCACGCCGCGTAGGTGGGCAGGTACAAGCA
GGCTCCGAGCCAGCATACCCATCAGGTACTATCGCATAAAGCCCAACAGAGCATCTGCAT
TGGAAGCTCTTGGGATGCGTTGGAAATGTCAACGCCGTTGTGCACCCGTGTTTCAATCAA
GCCCCGGTCCTTGGGCCTTGTGGCGCTGTAACATTTGACGATGG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000795A_C01 KCC000795A_c01
         (1064 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_310704.1| ENSANGP00000009997 [Anopheles gambiae] gi|21294...   265  1e-69
ref|NP_776858.1| peroxiredoxin 4 [Bos taurus] gi|22095987|sp|Q9B...   263  4e-69
ref|NP_006397.1| thioredoxin peroxidase; thioredoxin peroxidase ...   262  7e-69
ref|NP_445964.1| peroxiredoxin 4 [Rattus norvegicus] gi|4336879|...   262  7e-69
ref|NP_058044.1| peroxiredoxin 4; antioxidant enzyme AOE372; Prx...   262  7e-69

>ref|XP_310704.1| ENSANGP00000009997 [Anopheles gambiae] gi|21294261|gb|EAA06406.1|
           ENSANGP00000009997 [Anopheles gambiae str. PEST]
          Length = 239

 Score =  265 bits (677), Expect = 1e-69
 Identities = 124/177 (70%), Positives = 149/177 (84%)
 Frame = +2

Query: 44  VAKIGAPAPKFKAQAVVNGEIKEISLDDYKGKYVVLFFYPLDFTFVCPTEIVAFSDRVEE 223
           VA++  PAP F+  AVVN + +EI L DY+GKY+VLFFYPLDFTFVCPTEI+AFSDR+ E
Sbjct: 44  VAQVQQPAPSFQGTAVVNSDFREIKLADYRGKYLVLFFYPLDFTFVCPTEIIAFSDRINE 103

Query: 224 FRAINTEVIGASIDSQFTHLAFSNTPRTKGGLGGCKYPLVADLTKQIAKDYGVLIEDGPD 403
           FR +NTEV+G S+DS F+HLA+ NTPR  GGLG  +YPL+ADLTK+I+ DYGVL+ D   
Sbjct: 104 FRELNTEVVGVSVDSHFSHLAWINTPRKAGGLGKLEYPLLADLTKRISADYGVLLPD--- 160

Query: 404 AGVTLRGLFIISPTGVLRQITINDLPVGRSVDETLRLVKAFQFTDEHGEVCPANWNP 574
            G++LRGLFII P GV+RQITINDLPVGRSVDETLRL+KAFQF ++HGEVCPANW P
Sbjct: 161 -GISLRGLFIIDPAGVVRQITINDLPVGRSVDETLRLIKAFQFVEKHGEVCPANWEP 216

>ref|NP_776858.1| peroxiredoxin 4 [Bos taurus] gi|22095987|sp|Q9BGI2|PDX4_BOVIN
           Peroxiredoxin 4 (Prx-IV)
           gi|12407849|gb|AAG53660.1|AF305563_1 peroxiredoxin 4
           [Bos taurus]
          Length = 274

 Score =  263 bits (672), Expect = 4e-69
 Identities = 125/188 (66%), Positives = 149/188 (78%)
 Frame = +2

Query: 47  AKIGAPAPKFKAQAVVNGEIKEISLDDYKGKYVVLFFYPLDFTFVCPTEIVAFSDRVEEF 226
           AKI  PAP ++  AV+NGE KE+ L DY+GKY+V FFYPLDFTFVCPTEI+AF DR++EF
Sbjct: 82  AKISKPAPYWEGTAVINGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRIDEF 141

Query: 227 RAINTEVIGASIDSQFTHLAFSNTPRTKGGLGGCKYPLVADLTKQIAKDYGVLIEDGPDA 406
           R+INTEV+  S+DSQFTHLA+ NTPR +GGLG    PL+ADL  QI+KDYGV +E   D+
Sbjct: 142 RSINTEVVACSVDSQFTHLAWINTPRRQGGLGSINIPLLADLNHQISKDYGVYLE---DS 198

Query: 407 GVTLRGLFIISPTGVLRQITINDLPVGRSVDETLRLVKAFQFTDEHGEVCPANWNPAPRP 586
           G TLRGLFII   G+LRQIT+NDLPVGRSVDETLRLV+AFQ+TD+HGEVCPA W P    
Sbjct: 199 GHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSET 258

Query: 587 *RPTPPSR 610
             P P  +
Sbjct: 259 IIPDPAGK 266

>ref|NP_006397.1| thioredoxin peroxidase; thioredoxin peroxidase (antioxidant enzyme)
           [Homo sapiens] gi|3024727|sp|Q13162|PDX4_HUMAN
           Peroxiredoxin 4 (Prx-IV) (Thioredoxin peroxidase AO372)
           (Thioredoxin-dependent peroxide reductase A0372)
           (Antioxidant enzyme AOE372) (AOE37-2)
           gi|7432669|pir||G01790 probable thiol-specific reductase
           (EC 1.-.-.-) AOE37-2 - human gi|799381|gb|AAB95175.1|
           antioxidant enzyme AOE37-2 [Homo sapiens]
           gi|13177646|gb|AAH03609.1| Thioredoxin peroxidase [Homo
           sapiens] gi|13937985|gb|AAH07107.1| Thioredoxin
           peroxidase [Homo sapiens] gi|16876997|gb|AAH16770.1|
           Thioredoxin peroxidase [Homo sapiens]
          Length = 271

 Score =  262 bits (670), Expect = 7e-69
 Identities = 125/188 (66%), Positives = 151/188 (79%)
 Frame = +2

Query: 47  AKIGAPAPKFKAQAVVNGEIKEISLDDYKGKYVVLFFYPLDFTFVCPTEIVAFSDRVEEF 226
           AKI  PAP ++  AV++GE KE+ L DY+GKY+V FFYPLDFTFVCPTEI+AF DR+EEF
Sbjct: 79  AKISKPAPYWEGTAVIDGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRLEEF 138

Query: 227 RAINTEVIGASIDSQFTHLAFSNTPRTKGGLGGCKYPLVADLTKQIAKDYGVLIEDGPDA 406
           R+INTEV+  S+DSQFTHLA+ NTPR +GGLG  + PL++DLT QI+KDYGV +E   D+
Sbjct: 139 RSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLTHQISKDYGVYLE---DS 195

Query: 407 GVTLRGLFIISPTGVLRQITINDLPVGRSVDETLRLVKAFQFTDEHGEVCPANWNPAPRP 586
           G TLRGLFII   G+LRQIT+NDLPVGRSVDETLRLV+AFQ+TD+HGEVCPA W P    
Sbjct: 196 GHTLRGLFIIDDKGILRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSET 255

Query: 587 *RPTPPSR 610
             P P  +
Sbjct: 256 IIPDPAGK 263

>ref|NP_445964.1| peroxiredoxin 4 [Rattus norvegicus] gi|4336879|gb|AAD17993.1| PRx
           IV [Rattus norvegicus] gi|37590233|gb|AAH59122.1|
           Peroxiredoxin 4 [Rattus norvegicus]
          Length = 273

 Score =  262 bits (670), Expect = 7e-69
 Identities = 125/188 (66%), Positives = 150/188 (79%)
 Frame = +2

Query: 47  AKIGAPAPKFKAQAVVNGEIKEISLDDYKGKYVVLFFYPLDFTFVCPTEIVAFSDRVEEF 226
           AKI  PAP ++  AV+NGE KE+ L DY+GKY+V FFYPLDFTFVCPTEI+AF DR+EEF
Sbjct: 81  AKISKPAPYWEGTAVINGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRIEEF 140

Query: 227 RAINTEVIGASIDSQFTHLAFSNTPRTKGGLGGCKYPLVADLTKQIAKDYGVLIEDGPDA 406
           ++INTEV+  S+DSQFTHLA+ NTPR +GGLG  + PL++DL  QI+KDYGV +E   D+
Sbjct: 141 KSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLNHQISKDYGVYLE---DS 197

Query: 407 GVTLRGLFIISPTGVLRQITINDLPVGRSVDETLRLVKAFQFTDEHGEVCPANWNPAPRP 586
           G TLRGLFII   GVLRQIT+NDLPVGRSVDETLRLV+AFQ+TD+HGEVCPA W P    
Sbjct: 198 GHTLRGLFIIDDKGVLRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSET 257

Query: 587 *RPTPPSR 610
             P P  +
Sbjct: 258 IIPDPAGK 265

>ref|NP_058044.1| peroxiredoxin 4; antioxidant enzyme AOE372; Prx IV [Mus musculus]
           gi|3024715|sp|O08807|PDX4_MOUSE Peroxiredoxin 4 (Prx-IV)
           (Thioredoxin peroxidase AO372) (Thioredoxin-dependent
           peroxide reductase A0372) (Antioxidant enzyme AOE372)
           gi|2104955|gb|AAB57846.1| antioxidant enzyme AOE372 [Mus
           musculus] gi|12836669|dbj|BAB23758.1| unnamed protein
           product [Mus musculus] gi|13097150|gb|AAH03349.1|
           Peroxiredoxin 4 [Mus musculus]
           gi|18044557|gb|AAH19578.1| Peroxiredoxin 4 [Mus
           musculus]
          Length = 274

 Score =  262 bits (670), Expect = 7e-69
 Identities = 125/188 (66%), Positives = 150/188 (79%)
 Frame = +2

Query: 47  AKIGAPAPKFKAQAVVNGEIKEISLDDYKGKYVVLFFYPLDFTFVCPTEIVAFSDRVEEF 226
           AKI  PAP ++  AV+NGE KE+ L DY+GKY+V FFYPLDFTFVCPTEI+AF DR+EEF
Sbjct: 82  AKISKPAPYWEGTAVINGEFKELKLTDYRGKYLVFFFYPLDFTFVCPTEIIAFGDRIEEF 141

Query: 227 RAINTEVIGASIDSQFTHLAFSNTPRTKGGLGGCKYPLVADLTKQIAKDYGVLIEDGPDA 406
           ++INTEV+  S+DSQFTHLA+ NTPR +GGLG  + PL++DL  QI+KDYGV +E   D+
Sbjct: 142 KSINTEVVACSVDSQFTHLAWINTPRRQGGLGPIRIPLLSDLNHQISKDYGVYLE---DS 198

Query: 407 GVTLRGLFIISPTGVLRQITINDLPVGRSVDETLRLVKAFQFTDEHGEVCPANWNPAPRP 586
           G TLRGLFII   GVLRQIT+NDLPVGRSVDETLRLV+AFQ+TD+HGEVCPA W P    
Sbjct: 199 GHTLRGLFIIDDKGVLRQITLNDLPVGRSVDETLRLVQAFQYTDKHGEVCPAGWKPGSET 258

Query: 587 *RPTPPSR 610
             P P  +
Sbjct: 259 IIPDPAGK 266



EST assemble image


clone accession position
1 MX222e06_r BP090341 1 567
2 HC015e05_r AV633006 3 667
3 HC056a01_r AV636163 9 667
4 LC033g03_r AV621274 13 703
5 HC078f05_r AV637865 17 618
6 HC015f11_r AV633018 22 477
7 LC029e09_r AV620982 30 709
8 LC031d12_r AV621116 43 708
9 LC094b08_r AV625528 86 331
10 LC078f06_r AV624506 105 654
11 LC044f10_r AV622072 105 698
12 LC044f03_r AV622145 105 657
13 LC087a05_r AV625038 109 705
14 LCL078h07_r AV630442 109 708
15 LC082d10_r AV624769 109 705
16 MX022a11_r BP086981 109 568
17 MX066h06_r BP088704 109 603
18 LC066b07_r AV623604 109 698
19 HC018a06_r AV633206 109 607
20 LC017h03_r AV620121 109 674
21 MX022a07_r BP086979 109 562
22 LC038b01_r AV621584 110 636
23 LC029h09_r AV621012 110 716
24 MX019h01_r BP086902 115 627
25 LCL021b09_r AV627105 116 440
26 CM003a03_r AV386545 117 626
27 LC085d01_r AV624980 118 569
28 MX216h10_r BP089979 119 452
29 CM004e12_r AV386684 120 624
30 CM017e06_r AV388150 120 776
31 CM035a05_r AV388689 120 703
32 LC063f09_r AV623431 121 693
33 MX206b06_r BP089379 122 549
34 LC003d08_r AV619075 122 710
35 LC034c05_r AV621314 122 681
36 HCL002f04_r AV639661 123 641
37 HC027g10_r AV633989 123 567
38 HC012d08_r AV632773 126 487
39 LC019c06_r AV620226 126 717
40 LC027b12_r AV620814 126 593
41 MX006a09_r BP086295 126 560
42 CM012e02_r AV387183 127 698
43 CM057f11_r AV390461 128 353
44 HC064a02_r AV636773 129 649
45 CM093h02_r AV392953 130 709
46 CM025f11_r AV388095 130 807
47 MXL036g07_r BP095154 130 598
48 CL66f01_r AV396738 132 590
49 HC080g06_r AV638020 134 628
50 LC080e01_r AV624633 140 682
51 CM048a12_r AV389079 140 601
52 CM072e12_r AV391455 140 817
53 CM021e07_r AV387981 141 810
54 MX066c08_r BP088676 143 637
55 CM047h11_r AV388565 148 369
56 LC008h08_r AV619482 540 1002
57 LC026g12_r AV620786 760 1216
58 LC041a01_r AV621788 785 1295
59 LC041c11_r AV621815 832 1229




Chlamydomonas reinhardtii
Kazusa DNA Research Institute