Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000779A_C01 KCC000779A_c01
(517 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_006159.1| NK6 transcription factor related, locus 1; NK h... 46 2e-04
sp|Q60554|NK61_MESAU Homeobox protein Nkx-6.1 gi|2137090|pir||I4... 46 3e-04
ref|NP_113925.1| NK homeobox (Drosophila), family 6, A; NK6 tran... 45 4e-04
ref|NP_510481.1| putative protein (XP580) [Caenorhabditis elegan... 45 5e-04
ref|NP_659204.1| homeodomain transcription factor Nkx6.1; Drosop... 45 5e-04
>ref|NP_006159.1| NK6 transcription factor related, locus 1; NK homeo box, family 6,
member A; Nkx6.1; NK6 transcription factor homolog A
(Drosophila) [Homo sapiens]
gi|6016211|sp|P78426|NK61_HUMAN Homeobox protein Nkx-6.1
gi|1894911|gb|AAD11962.1| NK homeobox protein [Homo
sapiens]
Length = 367
Score = 46.2 bits (108), Expect = 2e-04
Identities = 37/108 (34%), Positives = 52/108 (47%), Gaps = 11/108 (10%)
Frame = +1
Query: 223 SGSVSGLASPGLAISSPGLLPHASASGLVPTAAPPSGLRRDMSPARPLMRHSISGI---- 390
S S S SP L +PG L + GL +PP + +S A P H I+ I
Sbjct: 53 SSSSSSSPSPPLGTHNPGGLKPPATGGLSSLGSPP----QQLSAATP---HGINNILSRP 105
Query: 391 -------ASTPSPSRPGGLTAYSSYSKEDALSAAAAAAAATVSSANAP 513
A+ PS S G ++ SS + + SAAAAAAAA ++A++P
Sbjct: 106 SMPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSP 153
>sp|Q60554|NK61_MESAU Homeobox protein Nkx-6.1 gi|2137090|pir||I48188 gene NKx6.1 protein
- golden hamster gi|587467|emb|CAA57166.1| NKx6.1
[Mesocricetus auratus]
Length = 364
Score = 45.8 bits (107), Expect = 3e-04
Identities = 38/109 (34%), Positives = 53/109 (47%), Gaps = 11/109 (10%)
Frame = +1
Query: 223 SGSVSGLASPGLAISSPGLLPHASASGLVPTAAPPSGLRRDMSPARPLMRHSISGI---- 390
S S S SP L +PG L +A GL ++PP + +S A P H I+ I
Sbjct: 52 SSSSSSSPSPPLGAHNPGGLKPPAAGGLSSLSSPP----QQLSAATP---HGINDILSRP 104
Query: 391 -------ASTPSPSRPGGLTAYSSYSKEDALSAAAAAAAATVSSANAPP 516
A+ PS S G ++ SS + + SAAAAAAAA ++A + P
Sbjct: 105 SMPVASGAALPSASPSGSSSSSSSSASATSASAAAAAAAAAAAAAASSP 153
>ref|NP_113925.1| NK homeobox (Drosophila), family 6, A; NK6 transcription factor
related, locus 1 (Drosophila); NK6 transcription factor
homolog A (Drosophila) [Rattus norvegicus]
gi|34876014|ref|XP_346456.1| NK homeobox (Drosophila),
family 6, A [Rattus norvegicus]
gi|6016213|sp|O35762|NK61_RAT Homeobox protein Nkx-6.1
gi|2218137|gb|AAB61665.1| homeodomain protein Nkx6.1
[Rattus norvegicus]
Length = 365
Score = 45.4 bits (106), Expect = 4e-04
Identities = 38/109 (34%), Positives = 52/109 (46%), Gaps = 11/109 (10%)
Frame = +1
Query: 223 SGSVSGLASPGLAISSPGLLPHASASGLVPTAAPPSGLRRDMSPARPLMRHSISGI---- 390
S S S SP L +PG L +A GL +PP + +S A P H I+ I
Sbjct: 53 SSSSSSSPSPPLGAHNPGGLKPPAAGGLSSLGSPP----QQLSAATP---HGINDILSRP 105
Query: 391 -------ASTPSPSRPGGLTAYSSYSKEDALSAAAAAAAATVSSANAPP 516
A+ PS S G ++ SS + + SAAAAAAAA ++A + P
Sbjct: 106 SMPVASGAALPSASPSGSSSSSSSSASATSASAAAAAAAAAAAAAASSP 154
>ref|NP_510481.1| putative protein (XP580) [Caenorhabditis elegans]
gi|7503429|pir||T22216 hypothetical protein F45B8.3 -
Caenorhabditis elegans gi|5824504|emb|CAB05726.2|
Hypothetical protein F45B8.3 [Caenorhabditis elegans]
Length = 241
Score = 45.1 bits (105), Expect = 5e-04
Identities = 28/91 (30%), Positives = 36/91 (38%), Gaps = 10/91 (10%)
Frame = +2
Query: 254 DSPSPL-------LDCCRTPRQAASCPPRRRPAAYGGTCHPPDRSCVTA---SPASPPPP 403
D P P +CC PR + SC P PA P C + +P PPPP
Sbjct: 55 DGPQPFNPVFNIHFNCCGAPRPSPSCCPYVPPAPLPPPPPPASPCCGPSPVPAPCCPPPP 114
Query: 404 APAVPAG*QPTAATARRMLFQQQPQPQQQPC 496
APA P P T ++ +Q + PC
Sbjct: 115 APAAPCCPPPPPPTPSPLVCCKQAPVPENPC 145
Score = 36.2 bits (82), Expect = 0.25
Identities = 30/102 (29%), Positives = 36/102 (34%), Gaps = 3/102 (2%)
Frame = +2
Query: 200 PKRSCACAAAP*AGWRHPDSPSPLLDCCRTPRQAASCPPRRRPAAYGGTCHPPDRSC--V 373
P S C +P P P+P CC P PP P P+ C +
Sbjct: 94 PPASPCCGPSPVPAPCCPPPPAPAAPCCPPPP-----PPTPSPLVCCKQAPVPENPCCQI 148
Query: 374 TASPASPPPPAPA-VPAG*QPTAATARRMLFQQQPQPQQQPC 496
A+ PPP APA A PT QP P+ PC
Sbjct: 149 VAAAMPPPPSAPACCVAAPVPTNPCC-------QPAPRPAPC 183
>ref|NP_659204.1| homeodomain transcription factor Nkx6.1; Drosophila NK
transcription factor related, gene family 6, locus 1
[Mus musculus] gi|27734433|sp|Q99MA9|NK61_MOUSE Homeobox
protein Nkx-6.1 gi|13650146|gb|AAK37567.1|AF357883_1
homeodomain transcription factor [Mus musculus]
Length = 365
Score = 45.1 bits (105), Expect = 5e-04
Identities = 38/109 (34%), Positives = 52/109 (46%), Gaps = 11/109 (10%)
Frame = +1
Query: 223 SGSVSGLASPGLAISSPGLLPHASASGLVPTAAPPSGLRRDMSPARPLMRHSISGI---- 390
S S S SP L +PG L +A GL +PP + +S A P H I+ I
Sbjct: 53 SSSSSSSPSPPLGSHNPGGLKPPAAGGLSSLGSPP----QQLSAATP---HGINDILSRP 105
Query: 391 -------ASTPSPSRPGGLTAYSSYSKEDALSAAAAAAAATVSSANAPP 516
A+ PS S G ++ SS + + SAAAAAAAA ++A + P
Sbjct: 106 SMPVASGAALPSASPSGSSSSSSSSASATSASAAAAAAAAAAAAAASSP 154
