KCC000778A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000778A_C01 KCC000778A_c01
gcagcggATAGCCACCATCGCCACTTCCGTGGGTGGTGCTGTCGTGCTTTGTGGCACCGG
CTCCACTTCTGCATCGCCGATCGCGCAGTCGCCGGCCCTGGCCGCGCTGCCCGCTCACCT
ACAGAGCGCATCCAGCTCAGCCGCTGCCGCCGCTGCTGCCAACGCTCACTGGCTCCAGCA
GCAGCAGCAACAGTTTGGCGGCTCGGTTGACGCCGCCGACGCCGCGCCCACACCGCCCGC
CAAACGCGCCCGCTGCGCCGTCTCGGCTGCCAACGCCTCTCCGCTGCAGGGCCTGCAGCC
GTCCCTGTCGCAGCTACAGCCTCAGCAGCCGATGCTGACAGCATCGCTGCATGCTGCTTG
CGGCTACCCGGCTCCCTACGCCGCCGCTGGCACTCCCGCGACCGCCTTCACGACCACCAA
CGCCATGTGTGTGGGGTCGGGCTTTGCCGGGGAGGCGCTCGCCTGCCGCCCTGCACAGCT
CACCCAACAGCCATCCCTGCAGCAACAGCAGTTACAGCTACCAGTCGGCCTGGAGGCCTA
CGGCAGCAGCACCAGCAACA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000778A_C01 KCC000778A_c01
         (560 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAD41594.1|AF071081_1 proline-rich mucin homolog [Mycobacteri...    56  4e-07
ref|NP_294181.1| hypothetical protein [Deinococcus radiodurans] ...    55  8e-07
dbj|BAB47485.1| KIAA1856 protein [Homo sapiens]                        53  3e-06
ref|XP_166549.2| KIAA1856 protein [Homo sapiens] gi|37538811|ref...    53  3e-06
ref|NP_189083.1| protein kinase -related [Arabidopsis thaliana]        50  2e-05

>gb|AAD41594.1|AF071081_1 proline-rich mucin homolog [Mycobacterium tuberculosis]
          Length = 763

 Score = 55.8 bits (133), Expect = 4e-07
 Identities = 59/193 (30%), Positives = 73/193 (37%), Gaps = 12/193 (6%)
 Frame = +3

Query: 12  PPSPLPWVVLSCFVAPAPLLHRRSRSRRPWPRCPLTYRAHPAQPLPPLLPTLTGSSSSS- 188
           PP P P    S  + PAP          P P  P   R  P+ P+PP  P    +S  + 
Sbjct: 474 PPEP-PEPKSSPALPPAP----------PAPSMPSAVRVPPSPPIPPAPPAAPRASMPAL 522

Query: 189 -----NSLAARLTPPTPRPHRPPNAPAAPSRLPTPLRCRACSRPCRSYSLSSRC*QHRCM 353
                +  A RL PP P     PN+P AP   PTP +  + + PC              +
Sbjct: 523 PPAPPSPPATRLCPPLPPSPPAPNSPPAPPAPPTPPKLLSANPPCPP------------V 570

Query: 354 LLAATRLPTPPL-----ALPRPPSRPPTPCVWGRALPGRRSPAALHSSPNSHPCSNSSYS 518
             A  R P PP       LP PP  PPTP       P   SP A    P + P   S+  
Sbjct: 571 PPAPNRPPAPPAPPAPPELPAPPD-PPTP-------PVANSPPA----PPAPPAPPSALP 618

Query: 519 Y-QSAWRPTAAAP 554
           +      PT AAP
Sbjct: 619 FVNPPAPPTPAAP 631

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 55/177 (31%), Positives = 67/177 (37%), Gaps = 15/177 (8%)
 Frame = +3

Query: 12  PPSPLPWVVLSCF--VAPAPLLHRRSRSRRPWPRCPLTYRAHPAQPLPPLLPTLTGSSSS 185
           PP+P  W+++S      PAP    + +S+ P+P  P    A PA+ L P LP     +  
Sbjct: 33  PPAPPCWMLVSAAPPCPPAPPAPPKPKSKAPFPPVP---PAPPARELAPPLPPAPPEAPR 89

Query: 186 SNSLAARLTPP-------TPRPHRP-----PNAPAAPSRLPTPLRCRACSRPCRSYSLSS 329
            +  A    PP        P P  P     PN+P  P   P P    A   P      S 
Sbjct: 90  ESRPALPPCPPPPVVIPDPPEPAAPPVPPAPNSPPFPPFPPAPKFVPA--PPVPPVPNSP 147

Query: 330 RC*QHRCMLLAATRLPTPPLALPRP-PSRPPTPCVWGRALPGRRSPAALHSSPNSHP 497
                    L     P PPLA   P P  PPTP     A P    PAA  S P S P
Sbjct: 148 PFPPFPPAALNPPAPPAPPLANSPPLPPAPPTPAGTPPAAPWPPVPAAPKSKPASPP 204

 Score = 48.9 bits (115), Expect = 5e-05
 Identities = 58/205 (28%), Positives = 82/205 (39%), Gaps = 22/205 (10%)
 Frame = +3

Query: 6    G*PPSP-----LPWVVLSCFVAPAPLLHRRSRSRRPWPRCPLTYRAHPAQPLPPLLPTLT 170
            G PP+P      PW      +APAP   +      P P CP + + +P  P  P  P  +
Sbjct: 426  GVPPAPPIPPGKPWTTPP--LAPAPPEPKTVPVLPPGPSCPPSEKPNPPAPPEPPEPKSS 483

Query: 171  GS-----SSSSNSLAARLTPPTPRPHRPPNAPAA-----PSRLPTPLRCRAC-----SRP 305
             +      + S   A R+ P  P P  PP AP A     P   P+P   R C     S P
Sbjct: 484  PALPPAPPAPSMPSAVRVPPSPPIPPAPPAAPRASMPALPPAPPSPPATRLCPPLPPSPP 543

Query: 306  CRSYSLSSRC*QHRCMLLAATRLPTPPLALPRPPSRPPTPCVWGRALPGRRSPAALHSSP 485
              +   +         LL+A   P PP  +P  P+RPP P       P   +P  L + P
Sbjct: 544  APNSPPAPPAPPTPPKLLSANP-PCPP--VPPAPNRPPAP-------PAPPAPPELPAPP 593

Query: 486  N--SHPCSNSSYSYQSAWRPTAAAP 554
            +  + P +NS  +  +   P +A P
Sbjct: 594  DPPTPPVANSPPAPPAPPAPPSALP 618

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 46/166 (27%), Positives = 59/166 (34%), Gaps = 4/166 (2%)
 Frame = +3

Query: 12  PPSPLPWVVLSCFVAPAPLLHRRSRSRRPWPRCPLTYRAHPAQPLPPLLPTLTGSSSSSN 191
           P  P P +  S  + PAP     +    PWP  P   ++ PA P  P  P +  +     
Sbjct: 160 PAPPAPPLANSPPLPPAPPTPAGTPPAAPWPPVPAAPKSKPASPPRPPAPPMPATPMEFP 219

Query: 192 SLAARLTPPTP----RPHRPPNAPAAPSRLPTPLRCRACSRPCRSYSLSSRC*QHRCMLL 359
            L     PP P     P  PP  P  P+ +P P        P +              +L
Sbjct: 220 PLPP--VPPDPISKETPPAPPAPPIPPAPVPIPPVPPLPPVPNKIPPAPPAPPVAVAAVL 277

Query: 360 AATRLPTPPLALPRPPSRPPTPCVWGRALPGRRSPAALHSSPNSHP 497
            A   P PPL    PP+ P  P      +PG      L   PNSHP
Sbjct: 278 VAPCPPLPPLPNNHPPAPPAAP------VPG----VPLAPLPNSHP 313

 Score = 44.7 bits (104), Expect = 9e-04
 Identities = 44/143 (30%), Positives = 52/143 (35%), Gaps = 5/143 (3%)
 Frame = +3

Query: 12  PPSPLPWVVLSCFVAPAPLLHRRSRSRRPWPRCPLTYRAHPAQPLPPLLPTLTGSSSSSN 191
           PPS LP+V       PAP      +SR   P  P      PA P PP+            
Sbjct: 613 PPSALPFVN-----PPAPPTPAAPKSRPALPAAP------PAPPAPPV------------ 649

Query: 192 SLAARLTPPTPRPHRPPNA-----PAAPSRLPTPLRCRACSRPCRSYSLSSRC*QHRCML 356
               R T P P P  PP       P AP   P PL     + P     +S        + 
Sbjct: 650 ----RATTPPPAPPAPPAPNSMALPPAPPDPPIPLLATPPAPPAPPLPMSPPAPP---LP 702

Query: 357 LAATRLPTPPLALPRPPSRPPTP 425
            AA   P PPL + +PPS P  P
Sbjct: 703 PAAPDPPAPPLTINQPPSPPLAP 725

 Score = 42.4 bits (98), Expect = 0.004
 Identities = 43/144 (29%), Positives = 48/144 (32%), Gaps = 6/144 (4%)
 Frame = +3

Query: 12  PPSPLPWVVLSCFVAPAPLLHRRSRSRRP-WPRCPLTYRAHPAQPLPPLLPTLTGSSSSS 188
           P  P P    S    PAP    +  S  P  P  P      PA P PP  P L       
Sbjct: 537 PLPPSPPAPNSPPAPPAPPTPPKLLSANPPCPPVPPAPNRPPAPPAPPAPPELPAPPDPP 596

Query: 189 NSLAARLTPPTPRPHRPPNA-----PAAPSRLPTPLRCRACSRPCRSYSLSSRC*QHRCM 353
               A   P  P P  PP+A     P AP   PTP   +  SRP               +
Sbjct: 597 TPPVANSPPAPPAPPAPPSALPFVNPPAP---PTPAAPK--SRP--------------AL 637

Query: 354 LLAATRLPTPPLALPRPPSRPPTP 425
             A    P PP+    PP  PP P
Sbjct: 638 PAAPPAPPAPPVRATTPPPAPPAP 661

 Score = 40.4 bits (93), Expect = 0.016
 Identities = 46/169 (27%), Positives = 63/169 (37%), Gaps = 5/169 (2%)
 Frame = +3

Query: 12  PPSPLPWVVLSCFVAPAPLLHRRSRSRRPWPRC---PLTYRAHPAQPLPPLLPTLTGSSS 182
           P  PLP + ++  V P P L   +    P P     P++    PA P+PP  P  T   +
Sbjct: 386 PLPPLPPLPINTAVPPIPPLPPVTALAPPLPPLAPLPISPGVPPAPPIPPGKPWTTPPLA 445

Query: 183 SSNSLAARLTPPTPR--PHRPPNAPAAPSRLPTPLRCRACSRPCRSYSLSSRC*QHRCML 356
            +        PP P+  P  PP     PS  P P        P  S +L          +
Sbjct: 446 PA--------PPEPKTVPVLPPGPSCPPSEKPNPPAPPEPPEPKSSPALPPA--PPAPSM 495

Query: 357 LAATRLPTPPLALPRPPSRPPTPCVWGRALPGRRSPAALHSSPNSHPCS 503
            +A R+P  P   P PP+ P            R S  AL  +P S P +
Sbjct: 496 PSAVRVPPSPPIPPAPPAAP------------RASMPALPPAPPSPPAT 532

 Score = 34.3 bits (77), Expect = 1.2
 Identities = 45/166 (27%), Positives = 55/166 (33%), Gaps = 20/166 (12%)
 Frame = +3

Query: 12  PPSPLPWVVLSCFVAPAPLLHRRSRSRRPWPRCPLTYRAH----PAQPLPPLLPTLTGSS 179
           PP+P+P       + P P L        P P  P    A     P  PLPPL      + 
Sbjct: 243 PPAPVP-------IPPVPPLPPVPNKIPPAPPAPPVAVAAVLVAPCPPLPPLPNNHPPAP 295

Query: 180 SSSNSLAARLTP-PTPRPHRPPNAPAAPSRL-PTPLRCRA--------------CSRPCR 311
            ++      L P P   P  PP+AP     L P P+  R               C R C 
Sbjct: 296 PAAPVPGVPLAPLPNSHPPAPPSAPVPGVPLAPLPISGRPVSVWKGSFTTLSTFCCRVCS 355

Query: 312 SYSLSSRC*QHRCMLLAATRLPTPPLALPRPPSRPPTPCVWGRALP 449
              L+      R      T   TP L  P PP  P  P     A+P
Sbjct: 356 GEVLAGALNPSRPSRSPLTTT-TPALPAPIPPLPPLPPLPINTAVP 400

 Score = 31.2 bits (69), Expect = 10.0
 Identities = 29/99 (29%), Positives = 35/99 (35%)
 Frame = +3

Query: 201 ARLTPPTPRPHRPPNAPAAPSRLPTPLRCRACSRPCRSYSLSSRC*QHRCMLLAATRLPT 380
           A L P  P P  P + P  P   P P        PC              ++ AA   P 
Sbjct: 11  APLPPAPPAPAEPKSKPPFPPAPPAP--------PC------------WMLVSAAPPCPP 50

Query: 381 PPLALPRPPSRPPTPCVWGRALPGRRSPAALHSSPNSHP 497
            P A P+P S+ P P V   A P R     L  +P   P
Sbjct: 51  APPAPPKPKSKAPFPPV-PPAPPARELAPPLPPAPPEAP 88

>ref|NP_294181.1| hypothetical protein [Deinococcus radiodurans]
           gi|7472740|pir||F75518 hypothetical protein -
           Deinococcus radiodurans (strain R1)
           gi|6458143|gb|AAF10038.1|AE001904_14 hypothetical
           protein [Deinococcus radiodurans]
          Length = 839

 Score = 54.7 bits (130), Expect = 8e-07
 Identities = 55/166 (33%), Positives = 71/166 (42%), Gaps = 4/166 (2%)
 Frame = +2

Query: 71  ASPIAQSPALAALPAHLQSASSSAAAAAAANAHWLQQQQQQFGGSVDAADAAPTPP-AKR 247
           +SP+A SPA  A      SA SSA AAA      +  +    GGSV A   APT P A++
Sbjct: 455 SSPVAASPARGA-----SSAPSSAPAAA------VPSRAPVSGGSVSAPRTAPTAPVAEQ 503

Query: 248 ARCAVSAANASPLQGLQPSLSQLQPQQPMLTASLHAACGYPAPYAAAGTPATAFTTTNAM 427
               VS + A+P  G   + S   P  P        A G  A  A+A   A    T  A 
Sbjct: 504 GEVPVSPSAAAPRGG---ASSAAAPSAPAAARGGSGAAGGAAGGASAPAAARPAQTPGAS 560

Query: 428 CVGSGFAGEALACRPAQ---LTQQPSLQQQQLQLPVGLEAYGSSTS 556
             G+   GE ++ RP+Q    +  P+        P G E  GS TS
Sbjct: 561 AGGASGGGEGVSARPSQGGTPSGTPASAPVAAGRPAGGEGSGSGTS 606

 Score = 43.9 bits (102), Expect = 0.001
 Identities = 53/184 (28%), Positives = 74/184 (39%), Gaps = 24/184 (13%)
 Frame = +3

Query: 81  SRSRRPWPRCPLTYRAHPAQPLPPLLPTLTGSSSSSNS----LAARLTPPTPRPHRPPN- 245
           S +  P    PL   A P +P P   PT T +  ++ +         TPP P+P  PP  
Sbjct: 72  SNAAAPLSTSPLA--ASPNKPAPATKPTPTPAKPATPAPEPPKPPEPTPPEPKPETPPEP 129

Query: 246 ---APAAPSRLPTPLR----------CRACSRPCRSYSLSSRC*QHRCMLLAATRLPTPP 386
              AP  P   PTP                 +P     ++ +       +L      TPP
Sbjct: 130 PKPAPEPPKPDPTPAEPLKPPVQDTPPPVTPKPVTPEPVTPKPAPTPPEVLQPPVAQTPP 189

Query: 387 LA---LPRPPSRPPTPCVWGRALPGRR-SPAALHSSPNSHPCSNSSYSYQ--SAWRPTAA 548
           +A   +P P S+ PTP V  +  P R   P A   +PN+ P    + + Q  +A  PTA 
Sbjct: 190 VAKPPVPAPTSQTPTPPV--QPAPTRTPPPQAARPTPNA-PAQTPAPATQAPAAQTPTAQ 246

Query: 549 APAT 560
           APAT
Sbjct: 247 APAT 250

 Score = 37.0 bits (84), Expect = 0.18
 Identities = 45/172 (26%), Positives = 57/172 (32%), Gaps = 2/172 (1%)
 Frame = +3

Query: 51  VAPAPLLHRRSRSRRPWPRCPLTYRAHPAQPLPPLLPTLTGSSSSSNSLAARLTPPTPRP 230
           V PAP      ++ RP P  P    A   Q      PT    ++         TP TP P
Sbjct: 207 VQPAPTRTPPPQAARPTPNAPAQTPAPATQAPAAQTPTAQAPATQ--------TPATPAP 258

Query: 231 HRPPNAPAAPSRLPTPLRCRACSRPCRSYSLSSRC*QHRCMLLAATRLPTPPLALPRPPS 410
                A  APS  P P +  A   P  S                      P  + P  PS
Sbjct: 259 AAQRPAGGAPSPAPAPAQANA---PAGS---------------VVPEATVPESSTPAAPS 300

Query: 411 --RPPTPCVWGRALPGRRSPAALHSSPNSHPCSNSSYSYQSAWRPTAAAPAT 560
              PPTP          R  A   +SP + P S+++   + A  P A  P T
Sbjct: 301 AQTPPTP---------TRETAQTEASP-AAPNSSAAAPNEPASEPVAGRPGT 342

>dbj|BAB47485.1| KIAA1856 protein [Homo sapiens]
          Length = 1134

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 50/145 (34%), Positives = 53/145 (36%), Gaps = 15/145 (10%)
 Frame = +3

Query: 102  PRCPLTYRAHPAQPLPPLLPTLTGSSSSSNSLAARLTP----PTPRPHRPPNAPAAPSRL 269
            P  P   RA P  P PP  P L         L  RL P    P PRPH PP  P  P   
Sbjct: 946  PALPSEARAPPPPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLP 1005

Query: 270  PTPLRCRACSRPCRSYSLSSRC*QHRCMLLAATRLPTPPLAL-------PRPPSRP---- 416
            P   R    +R  R                   + P P LAL       PRPPSRP    
Sbjct: 1006 PPQTRTLPAARTMR-------------------QPPPPRLALPRRRRSPPRPPSRPARRG 1046

Query: 417  PTPCVWGRALPGRRSPAALHSSPNS 491
            P P    R  P R SP  L  SP+S
Sbjct: 1047 PRPTPQARRRP-RPSPRRLLRSPHS 1070

 Score = 41.2 bits (95), Expect = 0.010
 Identities = 63/185 (34%), Positives = 70/185 (37%), Gaps = 16/185 (8%)
 Frame = +3

Query: 12   PPSPLPWVVLSCFVAPAPLLHRRSRSRRPWPRCPLTYRAHPAQP--LPPLLPTLTGSSSS 185
            PP PLP         P PL  R      P P  PL  R HP  P  LPPLLP        
Sbjct: 968  PPPPLP---------PPPLPLRLP----PLPPPPLP-RPHPPPPPPLPPLLPP-----PQ 1008

Query: 186  SNSLAARLT---PPTPR---PHRPPNAPAAPSR------LPTPLRCRACSRPCRSYSLSS 329
            + +L A  T   PP PR   P R  + P  PSR       PTP + R   RP     L S
Sbjct: 1009 TRTLPAARTMRQPPPPRLALPRRRRSPPRPPSRPARRGPRPTP-QARRRPRPSPRRLLRS 1067

Query: 330  RC*QHRCMLLAATRLPTPPLALPR--PPSRPPTPCVWGRALPGRRSPAALHSSPNSHPCS 503
                H    L + RL   P A PR    S  P P  W      R       S P+  P S
Sbjct: 1068 ---PHS---LCSPRLRPGPRADPRRERASTSPPPRSWPSGSACRPWRTGPRSPPSCQPGS 1121

Query: 504  NSSYS 518
            + S S
Sbjct: 1122 SGSGS 1126

>ref|XP_166549.2| KIAA1856 protein [Homo sapiens] gi|37538811|ref|XP_353550.1| KIAA1856
            protein [Homo sapiens]
          Length = 2182

 Score = 52.8 bits (125), Expect = 3e-06
 Identities = 50/145 (34%), Positives = 53/145 (36%), Gaps = 15/145 (10%)
 Frame = +3

Query: 102  PRCPLTYRAHPAQPLPPLLPTLTGSSSSSNSLAARLTP----PTPRPHRPPNAPAAPSRL 269
            P  P   RA P  P PP  P L         L  RL P    P PRPH PP  P  P   
Sbjct: 1994 PALPSEARAPPPPPPPPPHPPLPPPPLPPPPLPLRLPPLPPPPLPRPHPPPPPPLPPLLP 2053

Query: 270  PTPLRCRACSRPCRSYSLSSRC*QHRCMLLAATRLPTPPLAL-------PRPPSRP---- 416
            P   R    +R  R                   + P P LAL       PRPPSRP    
Sbjct: 2054 PPQTRTLPAARTMR-------------------QPPPPRLALPRRRRSPPRPPSRPARRG 2094

Query: 417  PTPCVWGRALPGRRSPAALHSSPNS 491
            P P    R  P R SP  L  SP+S
Sbjct: 2095 PRPTPQARRRP-RPSPRRLLRSPHS 2118

 Score = 41.2 bits (95), Expect = 0.010
 Identities = 63/185 (34%), Positives = 70/185 (37%), Gaps = 16/185 (8%)
 Frame = +3

Query: 12   PPSPLPWVVLSCFVAPAPLLHRRSRSRRPWPRCPLTYRAHPAQP--LPPLLPTLTGSSSS 185
            PP PLP         P PL  R      P P  PL  R HP  P  LPPLLP        
Sbjct: 2016 PPPPLP---------PPPLPLRLP----PLPPPPLP-RPHPPPPPPLPPLLPP-----PQ 2056

Query: 186  SNSLAARLT---PPTPR---PHRPPNAPAAPSR------LPTPLRCRACSRPCRSYSLSS 329
            + +L A  T   PP PR   P R  + P  PSR       PTP + R   RP     L S
Sbjct: 2057 TRTLPAARTMRQPPPPRLALPRRRRSPPRPPSRPARRGPRPTP-QARRRPRPSPRRLLRS 2115

Query: 330  RC*QHRCMLLAATRLPTPPLALPR--PPSRPPTPCVWGRALPGRRSPAALHSSPNSHPCS 503
                H    L + RL   P A PR    S  P P  W      R       S P+  P S
Sbjct: 2116 ---PHS---LCSPRLRPGPRADPRRERASTSPPPRSWPSGSACRPWRTGPRSPPSCQPGS 2169

Query: 504  NSSYS 518
            + S S
Sbjct: 2170 SGSGS 2174

>ref|NP_189083.1| protein kinase -related [Arabidopsis thaliana]
          Length = 694

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 53/179 (29%), Positives = 70/179 (38%), Gaps = 12/179 (6%)
 Frame = +3

Query: 12  PPSPLPWVVLSCFVAPAPLLHRRSRSRRPWPRCPLTYRAHPAQPLPPLLPTLTGSSSSSN 191
           PP+ +P +  S    P PL           P  PLT    P  P PPL P+   + + S 
Sbjct: 60  PPTTVPPIPPSTPSPPPPLTPSPLPPSPTTPSPPLT--PSPTTPSPPLTPSPPPAITPSP 117

Query: 192 SLAARLTPPTPR-PHRPPNAPAAPSRLPTPLR-----CRACSRPCRSYSLSSRC*QHRCM 353
            L     PP+P  P  PP +P+ PS   TP        R  S P  S +  S        
Sbjct: 118 PLTPSPLPPSPTTPSPPPPSPSIPSPPLTPSPPPSSPLRPSSPPPPSPATPS-------- 169

Query: 354 LLAATRLPTPPLALPRPPSRPPTPCVWGRALP------GRRSPAALHSSPNSHPCSNSS 512
                   TPP + P P +  P P V   + P      G RSP+   ++P S P + SS
Sbjct: 170 --------TPPRSPPPPSTPTPPPRVGSLSPPPPASPSGGRSPSTPSTTPGSSPPAQSS 220

 Score = 42.0 bits (97), Expect = 0.006
 Identities = 46/158 (29%), Positives = 54/158 (34%)
 Frame = +3

Query: 12  PPSPLPWVVLSCFVAPAPLLHRRSRSRRPWPRCPLTYRAHPAQPLPPLLPTLTGSSSSSN 191
           PP P P  V      P P     S    P P  P      P  P PPL P+ T  S    
Sbjct: 56  PPPPPPTTV-----PPIP----PSTPSPPPPLTPSPLPPSPTTPSPPLTPSPTTPSPPLT 106

Query: 192 SLAARLTPPTPRPHRPPNAPAAPSRLPTPLRCRACSRPCRSYSLSSRC*QHRCMLLAATR 371
                   P+P P   P+ P  PS  P P      S P  S S+ S              
Sbjct: 107 --------PSPPPAITPSPPLTPS--PLPPSPTTPSPPPPSPSIPS-----------PPL 145

Query: 372 LPTPPLALPRPPSRPPTPCVWGRALPGRRSPAALHSSP 485
            P+PP + P  PS PP P     + P R  P     +P
Sbjct: 146 TPSPPPSSPLRPSSPPPPSPATPSTPPRSPPPPSTPTP 183

 Score = 37.0 bits (84), Expect = 0.18
 Identities = 46/167 (27%), Positives = 59/167 (34%), Gaps = 5/167 (2%)
 Frame = +3

Query: 12  PPSPLPWVVLSCFVAPAPLLHRRSRSRRPWPRCPLTYRAHPAQPLPPLLPTLTGSSSSSN 191
           PP PLP       V P P       +  P P       A P  P P  +P +  S+ S  
Sbjct: 23  PPQPLP-------VTPPPPPTALPPALPPPPPPTALPPALPPPPPPTTVPPIPPSTPSPP 75

Query: 192 S-LAARLTPPTPRPHRPPNAPA----APSRLPTPLRCRACSRPCRSYSLSSRC*QHRCML 356
             L     PP+P    PP  P+    +P   P+P      S P     L           
Sbjct: 76  PPLTPSPLPPSPTTPSPPLTPSPTTPSPPLTPSPPPAITPSPPLTPSPLPPSP-TTPSPP 134

Query: 357 LAATRLPTPPLALPRPPSRPPTPCVWGRALPGRRSPAALHSSPNSHP 497
             +  +P+PPL    PPS P  P     + P   SPA   + P S P
Sbjct: 135 PPSPSIPSPPLTPSPPPSSPLRP-----SSPPPPSPATPSTPPRSPP 176

 Score = 33.5 bits (75), Expect = 2.0
 Identities = 40/149 (26%), Positives = 52/149 (34%), Gaps = 8/149 (5%)
 Frame = +3

Query: 132 PAQPLP---PLLPTLTGSSSSSNSLAARLTPPTPRPHRPPNAPAAPSRL---PTPLRCRA 293
           P QPLP   P  P          +L   L PP P    PP  P  P      P P    +
Sbjct: 14  PPQPLPIPPPPQPLPVTPPPPPTALPPALPPPPPPTALPPALPPPPPPTTVPPIPPSTPS 73

Query: 294 CSRPCRSYSLSSRC*QHRCMLLAATRLPTPPLALPRPPSRPPTPCVWGRAL-PGRRSPAA 470
              P     L          L  +   P+PPL    PP+  P+P +    L P   +P+ 
Sbjct: 74  PPPPLTPSPLPPSPTTPSPPLTPSPTTPSPPLTPSPPPAITPSPPLTPSPLPPSPTTPSP 133

Query: 471 LHSSPN-SHPCSNSSYSYQSAWRPTAAAP 554
              SP+   P    S    S  RP++  P
Sbjct: 134 PPPSPSIPSPPLTPSPPPSSPLRPSSPPP 162



EST assemble image


clone accession position
1 HCL003a12_r AV639685 1 283
2 CL64f02_r AV396657 8 427
3 MXL094c01_r BP098494 20 467
4 MXL094c03_r BP098496 20 515
5 HCL014c06_r AV640321 139 564




Chlamydomonas reinhardtii
Kazusa DNA Research Institute