Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000766A_C01 KCC000766A_c01
(691 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_888961.1| conserved hypothetical protein [Bordetella bron... 100 4e-20
ref|NP_880778.1| conserved hypothetical protein [Bordetella pert... 100 4e-20
ref|NP_883657.1| conserved hypothetical protein [Bordetella para... 100 4e-20
ref|ZP_00083655.1| COG3576: Predicted flavin-nucleotide-binding ... 94 1e-18
ref|NP_251726.1| hypothetical protein [Pseudomonas aeruginosa PA... 94 3e-18
>ref|NP_888961.1| conserved hypothetical protein [Bordetella bronchiseptica]
gi|33575837|emb|CAE32915.1| conserved hypothetical
protein [Bordetella bronchiseptica]
Length = 337
Score = 99.8 bits (247), Expect = 4e-20
Identities = 62/126 (49%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Frame = +2
Query: 245 AMSPWPIYHQGELAVQDRAGVRERAVELQD-FIRPAMPRQHAEFYEQQSLFYVGGRDATG 421
A PW H GELA+Q+RAG RER +L IR MP+QH +F+ Q + DA G
Sbjct: 27 ADGPW---HGGELAMQERAGARERMAQLGPRVIRDYMPQQHRDFFAQLPFMLLATVDAQG 83
Query: 422 QPWASV*VGRPGFVSAPDSSNLILQSYRRLPEDPLL--LAPGAHLGGLGIDLVTRRRNRV 595
PWASV G PGF +PD L L ++ +DP LA GA +G LGI+L TRRRNRV
Sbjct: 84 DPWASVLEGPPGFAHSPDERTLRLDAW-PAGDDPARAGLAHGAGVGMLGIELSTRRRNRV 142
Query: 596 NGTVLA 613
NG V A
Sbjct: 143 NGHVAA 148
>ref|NP_880778.1| conserved hypothetical protein [Bordetella pertussis]
gi|33563509|emb|CAE42402.1| conserved hypothetical
protein [Bordetella pertussis]
Length = 337
Score = 99.8 bits (247), Expect = 4e-20
Identities = 62/126 (49%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Frame = +2
Query: 245 AMSPWPIYHQGELAVQDRAGVRERAVELQD-FIRPAMPRQHAEFYEQQSLFYVGGRDATG 421
A PW H GELA+Q+RAG RER +L IR MP+QH +F+ Q + DA G
Sbjct: 27 ADGPW---HGGELAMQERAGARERMAQLGPRVIRDYMPQQHRDFFAQLPFMLLATVDAQG 83
Query: 422 QPWASV*VGRPGFVSAPDSSNLILQSYRRLPEDPLL--LAPGAHLGGLGIDLVTRRRNRV 595
PWASV G PGF +PD L L ++ +DP LA GA +G LGI+L TRRRNRV
Sbjct: 84 DPWASVLEGPPGFAHSPDERTLRLDAW-PAGDDPARAGLAHGAGVGMLGIELSTRRRNRV 142
Query: 596 NGTVLA 613
NG V A
Sbjct: 143 NGHVAA 148
>ref|NP_883657.1| conserved hypothetical protein [Bordetella parapertussis]
gi|33573017|emb|CAE36657.1| conserved hypothetical
protein [Bordetella parapertussis]
Length = 349
Score = 99.8 bits (247), Expect = 4e-20
Identities = 62/126 (49%), Positives = 75/126 (59%), Gaps = 3/126 (2%)
Frame = +2
Query: 245 AMSPWPIYHQGELAVQDRAGVRERAVELQD-FIRPAMPRQHAEFYEQQSLFYVGGRDATG 421
A PW H GELA+Q+RAG RER +L IR MP+QH +F+ Q + DA G
Sbjct: 39 ADGPW---HGGELAMQERAGARERMAQLGPRVIRDYMPQQHRDFFAQLPFMLLATVDAQG 95
Query: 422 QPWASV*VGRPGFVSAPDSSNLILQSYRRLPEDPLL--LAPGAHLGGLGIDLVTRRRNRV 595
PWASV G PGF +PD L L ++ +DP LA GA +G LGI+L TRRRNRV
Sbjct: 96 DPWASVLEGPPGFAHSPDERTLRLDAW-PAGDDPARAGLAHGAGVGMLGIELSTRRRNRV 154
Query: 596 NGTVLA 613
NG V A
Sbjct: 155 NGHVAA 160
>ref|ZP_00083655.1| COG3576: Predicted flavin-nucleotide-binding protein structurally
related to pyridoxine 5'-phosphate oxidase [Pseudomonas
fluorescens PfO-1]
Length = 677
Score = 94.4 bits (233), Expect = 1e-18
Identities = 56/122 (45%), Positives = 70/122 (56%), Gaps = 3/122 (2%)
Frame = +2
Query: 251 SPWPIYHQGELAVQDRAGVRERAVEL-QDFIRPAMPRQHAEFYEQQSLFYVGGRDATGQP 427
SPW H GE +Q GV ER E + IR MP QH +FY+Q G DA G+P
Sbjct: 5 SPW---HAGEQQLQAHVGVAERMEEFGRKVIRTWMPDQHRQFYQQLPFMLYGAVDAEGRP 61
Query: 428 WASV*VGRPGFVSAPDSSNLILQSYRRLP--EDPLLLAPGAHLGGLGIDLVTRRRNRVNG 601
WASV G PGF +P+ + L + LP +DP L GA +G LGI+L TRRRNR+NG
Sbjct: 62 WASVLEGEPGFAHSPEPTQL---QFASLPAADDPAQLQAGAAIGLLGIELHTRRRNRLNG 118
Query: 602 TV 607
+
Sbjct: 119 HI 120
>ref|NP_251726.1| hypothetical protein [Pseudomonas aeruginosa PA01]
gi|11349767|pir||C83267 hypothetical protein PA3036
[imported] - Pseudomonas aeruginosa (strain PAO1)
gi|9949140|gb|AAG06424.1|AE004728_10 hypothetical
protein PA3036 [Pseudomonas aeruginosa PAO1]
Length = 310
Score = 93.6 bits (231), Expect = 3e-18
Identities = 57/119 (47%), Positives = 72/119 (59%), Gaps = 3/119 (2%)
Frame = +2
Query: 266 YHQGELAVQDRAGVRERAVELQD-FIRPAMPRQHAEFYEQQSLFYVGGRDATGQPWASV* 442
+H GELA+Q+RAGVRE+ IR MP QH EF+ SL VG DA G P ASV
Sbjct: 8 FHAGELAIQERAGVREQVAGFGSRAIRTFMPDQHREFFALLSLLLVGSLDADGYPSASVL 67
Query: 443 VGRPGFVSAPDSSNLILQSYRRLPEDPLL--LAPGAHLGGLGIDLVTRRRNRVNGTVLA 613
G PGF +P+ + L + + + +DPL L G LG LG++ TRRRNR+NG VLA
Sbjct: 68 WGPPGFARSPEPTRLRIDNLPQ-ADDPLAANLEAGTRLGILGLEWPTRRRNRMNGRVLA 125
