KCC000764A_c02
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000764A_C02 KCC000764A_c02
GACGATGATGCTATCAGGATCCTTATTGTTCGCCGAGTTCTGCTCGCTGTTCGCCGAGTT
CGCCCGTGACCCCCCTCCACGGACCTCGCTGCGACTCCCCAACCCGCCTCGTCGTGCCGC
CGAGTTTGAGAGTCTTTTCGCCTTCGCGGACATCGCAGCGGTAAGCCAATAGCTTTGGGC
GTGGCTCAAGTGATTGGCTGGCCTGGCCAAGCCGAACGTGATACCCGGATGACAACCAGC
CACGCCCAGCTTGTCAGCCACATAGTTCAGAGCTTCATGAGAGTCCACTTGGTTAGTGTG
GGGTTATGTGTGTTGGGCTGGATGGTTCTCGTGTGGTTCGTGCACGGGACGATTGTGAAC
GCACTGGTGGTGCATGTTGCCACCGGAGGGCTTAACAAGAATCTTCGTGCACGGCCGCAC
GTTGTAGGTCAGTGTCTTGTACTTGGTGGGGTTGCATGTGCTGGACTCGCCAGTCCGTTC
GTATGCTGCTGCCCACCGGAGGGCTGTACTCGGGTTGACTATGCGCGGCACGACCGGCGG
ATTATTGCATACTGATCGCTTGTGCGATAGGCCCACCGGAGGGCTTGGCTTGGTCGCGCG
CGCGTAGTCGCGGCATGTGTGACATTGGCACACGCACGAGCATCATGCCTGCTGAGGGCT
TGCGTGTGGGGTTGCGCGTGCTGAGCACGCTGAACGCTTCGTATGCACACTGCTGCCCAC
CGGAGGGCTGTACTCGGGTTGACTATGCGCGGTACGACCGCCGGATTATTGCATACTGGT
CGCTTGTGCGATAGGCCCACCGGAGGGCTTGGCTTGGTCGCTCTCACGCGCGTAGGCGCG
GCACATGTGACATTGGCACACGCACGAGTATCTTGCCTGCTAAGGGACTTGCGTATGGGG
TTGCGCGTGCTGGGCACGCTGAACGCTTCGTATGCACACTGCTGCCCACCGGA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000764A_C02 KCC000764A_c02
         (953 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAC87637.1| unnamed protein product [Homo sapiens]                 46  8e-04
gb|AAK38831.1|AF283695_1 female-specific doublesex protein [Mega...    41  0.034
gb|AAK38832.1|AF283696_1 male-specific doublesex protein [Megase...    41  0.034
ref|XP_292636.2| similar to Hypothetical protein KIAA0563 [Homo ...    39  0.17
ref|NP_524024.1| Salivary gland secretion 3 CG11720-PA [Drosophi...    37  0.38

>dbj|BAC87637.1| unnamed protein product [Homo sapiens]
          Length = 286

 Score = 46.2 bits (108), Expect = 8e-04
 Identities = 63/224 (28%), Positives = 83/224 (36%), Gaps = 18/224 (8%)
 Frame = -1

Query: 908 TRNPIRKSLSRQDTRACAN-----------VTCAAPTRVRATKP---SPPVGLSHKRPVC 771
           TR P R S  R   RA               T A PTR+  T P   +PP     + P  
Sbjct: 46  TRTPPRASPRRTPPRASPRRTPPRASLTRPPTRAPPTRMPPTAPPTRTPPTASPARTPPT 105

Query: 770 NNPAVVPRIVNPSTALRWAAVCIRSVQRAQHAQPHTQALSRHDARACANVT--HAATTRA 597
            +PA  P   +P+     A+      + +    P T + +R   RA    T   A+ TR 
Sbjct: 106 ESPARTPPTASPARTPPRASPTRTPPRASPRRTPSTASPTRTPPRASPRRTPPRASPTRT 165

Query: 596 RPSQALRWAYRTSDQYAIIRRSCRA*STRVQPSGGQQHTNGLASPAHATPP--STRH*PT 423
            P  + +   RT  + +  R   RA  TR  P    + T   ASP   TPP  S    P 
Sbjct: 166 PPRASPK---RTPPRASPRRTPPRASPTRAPPRASPKRTPPTASPTR-TPPRASPTRTPP 221

Query: 422 TCGRARRFLLSPPVATCTTSAFTIVPCTNHTRTIQPNTHNPTLT 291
           T   AR    + P  T  T +    P    TR   P   +PT T
Sbjct: 222 TESPARTPPRASPTRTPPTESPARTPSRASTRRTPPRA-SPTRT 264

>gb|AAK38831.1|AF283695_1 female-specific doublesex protein [Megaselia scalaris]
          Length = 310

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 6/166 (3%)
 Frame = -3

Query: 525 RIVNPSTALRWAAAYERT-----GE-SSTCNPTKYKTLTYNVRPCTKILVKPSGGNMHHQ 364
           +I+   TALR A A + +     GE  +T +P +Y  +  N +P   +       + HH 
Sbjct: 78  KIMAAQTALRRAQAQDESRPLSAGEIPATIHPAQYTLMQINSQPYPVV-------HPHHH 130

Query: 363 CVHNRPVHEPHENHPAQHT*PHTNQVDSHEALNYVADKLGVAGCHPGITFGLARPANHLS 184
             HN   H  +++HP  H   H NQ   H  +  V    G++            P  H  
Sbjct: 131 IAHNNHNHHVNQHHP--HHIMHNNQPHLHHQVTAVTSSGGIS----------KSPVEHNP 178

Query: 183 HAQSYWLTAAMSAKAKRLSNSAARRGGLGSRSEVRGGGSRANSANS 46
           H Q    T A S +  R S+SA       S S    GG+ A   +S
Sbjct: 179 H-QITVPTPAQSLEGSRDSSSA-------SPSSTSNGGAVAAPGSS 216

>gb|AAK38832.1|AF283696_1 male-specific doublesex protein [Megaselia scalaris]
          Length = 573

 Score = 40.8 bits (94), Expect = 0.034
 Identities = 45/166 (27%), Positives = 66/166 (39%), Gaps = 6/166 (3%)
 Frame = -3

Query: 525 RIVNPSTALRWAAAYERT-----GE-SSTCNPTKYKTLTYNVRPCTKILVKPSGGNMHHQ 364
           +I+   TALR A A + +     GE  +T +P +Y  +  N +P   +       + HH 
Sbjct: 78  KIMAAQTALRRAQAQDESRPLSAGEIPATIHPAQYTLMQINSQPYPVV-------HPHHH 130

Query: 363 CVHNRPVHEPHENHPAQHT*PHTNQVDSHEALNYVADKLGVAGCHPGITFGLARPANHLS 184
             HN   H  +++HP  H   H NQ   H  +  V    G++            P  H  
Sbjct: 131 IAHNNHNHHVNQHHP--HHIMHNNQPHLHHQVTAVTSSGGIS----------KSPVEHNP 178

Query: 183 HAQSYWLTAAMSAKAKRLSNSAARRGGLGSRSEVRGGGSRANSANS 46
           H Q    T A S +  R S+SA       S S    GG+ A   +S
Sbjct: 179 H-QITVPTPAQSLEGSRDSSSA-------SPSSTSNGGAVAAPGSS 216

>ref|XP_292636.2| similar to Hypothetical protein KIAA0563 [Homo sapiens]
          Length = 1161

 Score = 38.5 bits (88), Expect = 0.17
 Identities = 41/202 (20%), Positives = 73/202 (35%), Gaps = 9/202 (4%)
 Frame = -3

Query: 756  RTAHSQPEYSPPVGSSVHTKRSACSARATPHASPQQA*CSCVCQCHTCRDYARATKPSPP 577
            +T    P+ +  V S  + +  A +A+  P AS      + +C  +TCRD   +     P
Sbjct: 926  KTTAPHPDQNSLVQSESYAQNKALTAQEEPKASTS----TNICDLYTCRDETLSCIDLSP 981

Query: 576  VGLSHKRSVCNNPPVVPRIVNPS------TALRWAAAYERTGESSTCNPTKYKTLTYNVR 415
                H++     PP  P    PS      +  +    +E T ++   +   Y   +  V+
Sbjct: 982  KQRLHQQGTPAEPPGPPVEAEPSPKSSIESVAQTPLNHEVTVQTQGEDQAHYTLPSITVK 1041

Query: 414  PC---TKILVKPSGGNMHHQCVHNRPVHEPHENHPAQHT*PHTNQVDSHEALNYVADKLG 244
            P      I  +P+            P   P +  PAQ    H   + +         ++G
Sbjct: 1042 PADVEISITSEPTTDTDSSPAQQAAPNQHPEQETPAQPPEHHQLTIATQPTA-----EVG 1096

Query: 243  VAGCHPGITFGLARPANHLSHA 178
             +  H   T  L+ P N + H+
Sbjct: 1097 TSPVHQEATAQLSGPVNDVEHS 1118

>ref|NP_524024.1| Salivary gland secretion 3 CG11720-PA [Drosophila melanogaster]
           gi|134467|sp|P02840|SGS3_DROME Salivary glue protein
           Sgs-3 precursor gi|72267|pir||GSFF3 salivary glue
           protein sgs-3 - fruit fly (Drosophila melanogaster)
           gi|603989|emb|CAA25994.1| salivary gland glue protein
           [Drosophila melanogaster] gi|7294719|gb|AAF50056.1|
           CG11720-PA [Drosophila melanogaster]
          Length = 307

 Score = 37.4 bits (85), Expect = 0.38
 Identities = 46/205 (22%), Positives = 63/205 (30%), Gaps = 6/205 (2%)
 Frame = -1

Query: 869 TRACANVT----CAAPTRVRATKPSPPVGLSHKRPVCNNPAVVPRIVNPSTALRWAAVCI 702
           T  CA  T    C   T    T  +PP   S  +P C       +   P           
Sbjct: 32  TTTCAPRTTQPPCTTTTTTTTTTCAPPTQQSTTQPPCTTS----KPTTPKQTTTQLPCTT 87

Query: 701 RSVQRAQHAQPHTQALSRHDARACANVTHAATTRARPSQALRWAYRTSDQYAIIRRSCRA 522
            +  +A   +P T   +   A      T   TT   P        +T+ Q      +   
Sbjct: 88  PTTTKATTTKPTTTKATTTKATTTKPTTTKQTTTQLPCTTPTTTKQTTTQLPCTTPTTTK 147

Query: 521 *STRVQPSGGQQHTNGLASPAHATPPSTRH*PTTCGRARRFLLSPPVAT--CTTSAFTIV 348
            +T    +     T    +    T P+T    TT     +   + P  T   TT   T  
Sbjct: 148 PTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTK 207

Query: 347 PCTNHTRTIQPNTHNPTLTKWTLMK 273
           P T    T +P T  PT TK T  K
Sbjct: 208 PTTTKPTTTKPTTTKPTTTKPTTTK 232

 Score = 33.1 bits (74), Expect = 7.1
 Identities = 45/213 (21%), Positives = 65/213 (30%), Gaps = 14/213 (6%)
 Frame = -1

Query: 869 TRACANVTCAAPTRVRAT-------KPSPPVGLSHKRPVCNNPAVVPRIVNPSTALRWAA 711
           T      TCA PT+   T       KP+ P   + + P C  P          T  +   
Sbjct: 47  TTTTTTTTCAPPTQQSTTQPPCTTSKPTTPKQTTTQLP-CTTPTTTKATTTKPTTTK--- 102

Query: 710 VCIRSVQRAQHAQPHTQALSRHDARACANVTHAATTRARPSQALRWAYRTSDQYAIIRRS 531
               +  +A   +P T   +          T   TT   P         T+ +    + +
Sbjct: 103 ---ATTTKATTTKPTTTKQTTTQLPCTTPTTTKQTTTQLPCTTPTTTKPTTTKPTTTKPT 159

Query: 530 CRA*STRVQPSGGQQHTNGLASPAHATPPSTRH*PTTCGRARRFLLSPPVAT-------C 372
               +T    +     T    +    T P+T    TT     +   + P  T        
Sbjct: 160 TTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTKPT 219

Query: 371 TTSAFTIVPCTNHTRTIQPNTHNPTLTKWTLMK 273
           TT   T  P T    T +P T  PT TK T  K
Sbjct: 220 TTKPTTTKPTTTKPTTTKPTTTKPTTTKPTTTK 252



EST assemble image


clone accession position
1 MX252b01_r BP092287 1 452
2 HC088d07_r AV638600 231 649
3 LC066a12_r AV623598 440 953




Chlamydomonas reinhardtii
Kazusa DNA Research Institute