Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000758A_C01 KCC000758A_c01
(568 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAB90138.1| RNA-binding protein-like [Oryza sativa (japonica... 92 4e-18
dbj|BAB11080.1| contains similarity to RNA-binding protein~gene_... 83 3e-15
ref|NP_568660.2| RNA recognition motif (RRM)-containing protein ... 83 3e-15
ref|NP_851141.1| RNA recognition motif (RRM)-containing protein ... 83 3e-15
emb|CAD38733.1| hypothetical protein [Homo sapiens] 82 7e-15
>dbj|BAB90138.1| RNA-binding protein-like [Oryza sativa (japonica cultivar-group)]
Length = 389
Score = 92.4 bits (228), Expect = 4e-18
Identities = 48/103 (46%), Positives = 70/103 (67%)
Frame = +2
Query: 260 AAGSDAEVFLSASEDESVQQEITPELLSALVKQVEFYFSDANLPTDKKLLKQIRKDPDGF 439
A A V + SE + +T EL +VKQVE+YFSD NLPTD+ L+K ++K+ GF
Sbjct: 62 AEAGAAAVPMEPSEAGAGGVVLTDELCDRIVKQVEYYFSDENLPTDEFLIKFVKKNKQGF 121
Query: 440 VPVKLFANFRKVRALSKDVAIITEALRNAKLLQLSEDGKRVKR 568
VP+ + A+FR+++ LS+D++II ALR + L +S DGKRV+R
Sbjct: 122 VPIGVIASFRRMKKLSQDLSIIEAALRTSSKLVVSPDGKRVRR 164
>dbj|BAB11080.1| contains similarity to RNA-binding protein~gene_id:MPL12.3
[Arabidopsis thaliana]
Length = 411
Score = 82.8 bits (203), Expect = 3e-15
Identities = 44/109 (40%), Positives = 66/109 (60%)
Frame = +2
Query: 242 DHKATSAAGSDAEVFLSASEDESVQQEITPELLSALVKQVEFYFSDANLPTDKKLLKQIR 421
DH+ S D + + E + V I EL +++QVE+YFSD NLPTDK LL ++
Sbjct: 62 DHERNSGEDRDQDHGENPVETDGVVVPID-ELNQKIIRQVEYYFSDENLPTDKFLLNAMK 120
Query: 422 KDPDGFVPVKLFANFRKVRALSKDVAIITEALRNAKLLQLSEDGKRVKR 568
++ GFVP+ A F K++ L++D A+I AL+ + L +S D K+VKR
Sbjct: 121 RNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKR 169
>ref|NP_568660.2| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 420
Score = 82.8 bits (203), Expect = 3e-15
Identities = 44/109 (40%), Positives = 66/109 (60%)
Frame = +2
Query: 242 DHKATSAAGSDAEVFLSASEDESVQQEITPELLSALVKQVEFYFSDANLPTDKKLLKQIR 421
DH+ S D + + E + V I EL +++QVE+YFSD NLPTDK LL ++
Sbjct: 73 DHERNSGEDRDQDHGENPVETDGVVVPID-ELNQKIIRQVEYYFSDENLPTDKFLLNAMK 131
Query: 422 KDPDGFVPVKLFANFRKVRALSKDVAIITEALRNAKLLQLSEDGKRVKR 568
++ GFVP+ A F K++ L++D A+I AL+ + L +S D K+VKR
Sbjct: 132 RNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKR 180
>ref|NP_851141.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana] gi|15215748|gb|AAK91419.1| AT5g46250/MPL12_3
[Arabidopsis thaliana] gi|23308375|gb|AAN18157.1|
At5g46250/MPL12_3 [Arabidopsis thaliana]
Length = 422
Score = 82.8 bits (203), Expect = 3e-15
Identities = 44/109 (40%), Positives = 66/109 (60%)
Frame = +2
Query: 242 DHKATSAAGSDAEVFLSASEDESVQQEITPELLSALVKQVEFYFSDANLPTDKKLLKQIR 421
DH+ S D + + E + V I EL +++QVE+YFSD NLPTDK LL ++
Sbjct: 73 DHERNSGEDRDQDHGENPVETDGVVVPID-ELNQKIIRQVEYYFSDENLPTDKFLLNAMK 131
Query: 422 KDPDGFVPVKLFANFRKVRALSKDVAIITEALRNAKLLQLSEDGKRVKR 568
++ GFVP+ A F K++ L++D A+I AL+ + L +S D K+VKR
Sbjct: 132 RNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKKVKR 180
>emb|CAD38733.1| hypothetical protein [Homo sapiens]
Length = 501
Score = 81.6 bits (200), Expect = 7e-15
Identities = 45/111 (40%), Positives = 70/111 (62%), Gaps = 3/111 (2%)
Frame = +2
Query: 245 HKATSAAGSDAEVFLSASEDESVQQEITP---ELLSALVKQVEFYFSDANLPTDKKLLKQ 415
H T+A+G + +E E ++QE P EL+ LV Q+EFYFSD NL D LLK
Sbjct: 76 HSGTTASGGE-------NEREDLEQEWKPPDEELIKKLVDQIEFYFSDENLEKDAFLLKH 128
Query: 416 IRKDPDGFVPVKLFANFRKVRALSKDVAIITEALRNAKLLQLSEDGKRVKR 568
+R++ G+V VKL +F+KV+ L++D AL+ + +L+L+ED ++V+R
Sbjct: 129 VRRNKLGYVSVKLLTSFKKVKHLTRDWRTTAHALKYSVVLELNEDHRKVRR 179
