KCC000750A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000750A_C01 KCC000750A_c01
gtagacgaCACTATTAACAAAAAGCTGGGCTGGTGCGCGTCTCCATTTCCTTGACCCACC
ACTCGTCAAGCGCGTAGTCGTATAAGGCTTTCATTATGAAGCTTGGACTTAGGATATACG
AATGCCGTTGCCGGCAGCTGGTGGCTAGGGCTGCTGGGCGAGTTGGAGGAGCGGCAACCC
GGCGGAGAGTTTGGAGCACAGTCGCTGCCCTATCTGGGCAGGCCTCAGCTGCTCGGCCAG
GGCCCGAGAAGCCGACTTCGGCATGGCCAAACATCACTCCTGTTATAAAAGAGAAGATTG
CGATGTTCGAGGGACTGCAGGGCGACGATTTCAGGCATCCGCTGGACCAGCAAAACACCA
GCATGCTGCGGGCGGTGCCGGGGCTGGAGATGGTGGCCAAGAACTTCATGGGCCCGGTGG
CCGAGCAAGTGCTGCTGCTTGAGAACATCAGCACCAGCATCAAGATCGGGCCGGAGCAGC
TGCCCTCCATACACAAGCTGCTGGTGGACGCGGCCCGTATTCTGCAGATGGAGCCGCCGG
AGCTGTACGTGCGCCAGCACCCCGTGCCCAACGCCTACACACTGGCCATCGCCGGGGCAC
AGCCCTTCATCGTCAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000750A_C01 KCC000750A_c01
         (616 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_484217.1| hypothetical protein [Nostoc sp. PCC 7120] gi|2...   136  2e-31
ref|ZP_00106742.1| COG0501: Zn-dependent protease with chaperone...   135  5e-31
dbj|BAB63667.1| P0518C01.3 [Oryza sativa (japonica cultivar-group)]   130  1e-29
gb|AAM62770.1| unknown [Arabidopsis thaliana]                         130  1e-29
ref|NP_566808.1| expressed protein [Arabidopsis thaliana] gi|306...   130  1e-29

>ref|NP_484217.1| hypothetical protein [Nostoc sp. PCC 7120] gi|25532036|pir||AE1828
           hypothetical protein all0173 [imported] - Nostoc sp.
           (strain PCC 7120) gi|17135151|dbj|BAB77697.1|
           ORF_ID:all0173~hypothetical protein [Nostoc sp. PCC
           7120]
          Length = 291

 Score =  136 bits (343), Expect = 2e-31
 Identities = 58/101 (57%), Positives = 82/101 (80%)
 Frame = +3

Query: 312 GLQGDDFRHPLDQQNTSMLRAVPGLEMVAKNFMGPVAEQVLLLENISTSIKIGPEQLPSI 491
           GL+ D FRHPLD + T+ L+ +PGL+M+ +N +GP+AEQV  +ENI++S+ +G +QLP +
Sbjct: 10  GLKADSFRHPLDLEATTSLKQIPGLDMLVRNLLGPMAEQVFYVENIASSVLVGEKQLPDL 69

Query: 492 HKLLVDAARILQMEPPELYVRQHPVPNAYTLAIAGAQPFIV 614
           HKLL++A +IL +EPP+LYVRQHP PNAYT A+ G QPF+V
Sbjct: 70  HKLLLEACKILDIEPPQLYVRQHPAPNAYTFAMRGKQPFVV 110

>ref|ZP_00106742.1| COG0501: Zn-dependent protease with chaperone function [Nostoc
           punctiforme]
          Length = 193

 Score =  135 bits (340), Expect = 5e-31
 Identities = 58/101 (57%), Positives = 81/101 (79%)
 Frame = +3

Query: 312 GLQGDDFRHPLDQQNTSMLRAVPGLEMVAKNFMGPVAEQVLLLENISTSIKIGPEQLPSI 491
           GL+ D FRHPLD + T  L+ +PG++M+ +N++GP+AEQV  +ENI++SI +G +QLP +
Sbjct: 31  GLKADSFRHPLDLEATKTLKQIPGIDMLVRNWLGPMAEQVFYVENIASSILVGEKQLPDL 90

Query: 492 HKLLVDAARILQMEPPELYVRQHPVPNAYTLAIAGAQPFIV 614
           +KLL+DA  IL +EPP+LYVRQHP PNAYT A+ G QPF+V
Sbjct: 91  YKLLLDACEILDIEPPQLYVRQHPAPNAYTFAVRGKQPFVV 131

>dbj|BAB63667.1| P0518C01.3 [Oryza sativa (japonica cultivar-group)]
          Length = 327

 Score =  130 bits (328), Expect = 1e-29
 Identities = 58/101 (57%), Positives = 81/101 (79%)
 Frame = +3

Query: 312 GLQGDDFRHPLDQQNTSMLRAVPGLEMVAKNFMGPVAEQVLLLENISTSIKIGPEQLPSI 491
           GL  DDFRHPLD+QNT +LRAVPGL  + K  +GPV+EQV++L+NI +S+ +   QL  +
Sbjct: 53  GLDADDFRHPLDKQNTLLLRAVPGLNDMGKALLGPVSEQVMVLQNIGSSVLVSENQLSDL 112

Query: 492 HKLLVDAARILQMEPPELYVRQHPVPNAYTLAIAGAQPFIV 614
           H++L +AA++L  + P+LY+RQ+PVPNAYTLAI+G +PFIV
Sbjct: 113 HQILTEAAKLLNTDAPDLYIRQNPVPNAYTLAISGKKPFIV 153

>gb|AAM62770.1| unknown [Arabidopsis thaliana]
          Length = 344

 Score =  130 bits (328), Expect = 1e-29
 Identities = 61/104 (58%), Positives = 78/104 (74%)
 Frame = +3

Query: 303 MFEGLQGDDFRHPLDQQNTSMLRAVPGLEMVAKNFMGPVAEQVLLLENISTSIKIGPEQL 482
           +F+ L  DDFRHP D+QNT +LRA+PGL    K  +G + EQ++LLENI TS+ +   QL
Sbjct: 68  LFKDLDADDFRHPFDKQNTLLLRAIPGLNEFGKALLGSMTEQIMLLENIGTSVLVSKNQL 127

Query: 483 PSIHKLLVDAARILQMEPPELYVRQHPVPNAYTLAIAGAQPFIV 614
             +H LLV+AA IL +E P+LYVRQ PVPNAYTLAI+G +PFIV
Sbjct: 128 SDLHGLLVEAAEILNIEAPDLYVRQSPVPNAYTLAISGKKPFIV 171

>ref|NP_566808.1| expressed protein [Arabidopsis thaliana]
           gi|30688648|ref|NP_850640.1| expressed protein
           [Arabidopsis thaliana] gi|9279635|dbj|BAB01093.1|
           dbj|BAA17569.1~gene_id:MOJ10.19~similar to unknown
           protein [Arabidopsis thaliana]
           gi|15010606|gb|AAK73962.1| AT3g27110/MOJ10_21
           [Arabidopsis thaliana] gi|27363402|gb|AAO11620.1|
           At3g27110/MOJ10_21 [Arabidopsis thaliana]
          Length = 344

 Score =  130 bits (328), Expect = 1e-29
 Identities = 61/104 (58%), Positives = 78/104 (74%)
 Frame = +3

Query: 303 MFEGLQGDDFRHPLDQQNTSMLRAVPGLEMVAKNFMGPVAEQVLLLENISTSIKIGPEQL 482
           +F+ L  DDFRHP D+QNT +LRA+PGL    K  +G + EQ++LLENI TS+ +   QL
Sbjct: 68  LFKDLDADDFRHPFDKQNTLLLRAIPGLNEFGKALLGSMTEQIMLLENIGTSVLVSKNQL 127

Query: 483 PSIHKLLVDAARILQMEPPELYVRQHPVPNAYTLAIAGAQPFIV 614
             +H LLV+AA IL +E P+LYVRQ PVPNAYTLAI+G +PFIV
Sbjct: 128 SDLHGLLVEAAEILNIEAPDLYVRQSPVPNAYTLAISGKKPFIV 171



EST assemble image


clone accession position
1 LCL083g01_r AV630748 1 387
2 HCL036h09_r AV641589 9 499
3 LCL020e08_r AV627064 64 608
4 CL60d09_r AV396383 90 617




Chlamydomonas reinhardtii
Kazusa DNA Research Institute