Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000749A_C01 KCC000749A_c01
(526 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P49213|RL44_CHLRE 60S RIBOSOMAL PROTEIN L44 (L41) gi|7440768|... 213 2e-54
gb|AAP21779.1| ribosomal protein L36a [Branchiostoma belcheri ts... 166 1e-40
gb|AAK94425.1|AF398144_1 60S ribosomal protein L144 [Brassica ra... 163 1e-39
sp|P52809|RL44_PICJA 60S RIBOSOMAL PROTEIN L44 (L41) gi|1255906|... 162 2e-39
gb|AAM94276.1| ribosomal protein L44 [Chlamys farreri] 161 4e-39
>sp|P49213|RL44_CHLRE 60S RIBOSOMAL PROTEIN L44 (L41) gi|7440768|pir||T08060 ribosomal
protein L36a - Chlamydomonas reinhardtii
gi|974302|gb|AAB08435.1| ribosomal protein L41
gi|4545319|gb|AAD22491.1|AF130727_1 80S ribosomal
protein L41 [Chlamydomonas reinhardtii]
Length = 99
Score = 213 bits (541), Expect = 2e-54
Identities = 99/99 (100%), Positives = 99/99 (100%)
Frame = +3
Query: 27 MVNVPKTKRAFCKGCKKHMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKA 206
MVNVPKTKRAFCKGCKKHMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKA
Sbjct: 1 MVNVPKTKRAFCKGCKKHMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKA 60
Query: 207 KTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKKKGN 323
KTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKKKGN
Sbjct: 61 KTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKKKGN 99
>gb|AAP21779.1| ribosomal protein L36a [Branchiostoma belcheri tsingtaunese]
Length = 104
Score = 166 bits (421), Expect = 1e-40
Identities = 75/97 (77%), Positives = 84/97 (86%)
Frame = +3
Query: 27 MVNVPKTKRAFCKGCKKHMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHKKA 206
MVNVPKT+R FCK CKKH KVTQYKTGKASLY GKRRYDRKQSGYGGQTKP+FHKKA
Sbjct: 1 MVNVPKTRRTFCKKCKKHQNHKVTQYKTGKASLYKLGKRRYDRKQSGYGGQTKPIFHKKA 60
Query: 207 KTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKKK 317
KTTKKIVLR++C +C+ M +KRCKHFE+GGDKK+
Sbjct: 61 KTTKKIVLRLECTDCRSKRMVAIKRCKHFELGGDKKR 97
>gb|AAK94425.1|AF398144_1 60S ribosomal protein L144 [Brassica rapa subsp. pekinensis]
Length = 119
Score = 163 bits (412), Expect = 1e-39
Identities = 77/99 (77%), Positives = 83/99 (83%), Gaps = 2/99 (2%)
Frame = +3
Query: 24 KMVNVPKTKRAFCKG--CKKHMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFH 197
KMVN+PKTK+ +CK CKKH + KVTQYK GK SL AQGKRRYDRKQSGYGGQTKPVFH
Sbjct: 14 KMVNIPKTKKTYCKNKECKKHTLHKVTQYKKGKDSLAAQGKRRYDRKQSGYGGQTKPVFH 73
Query: 198 KKAKTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKK 314
KKAKTTKKIVLR+QCQ CK +KRCKHFEIGGDKK
Sbjct: 74 KKAKTTKKIVLRLQCQTCKHFSQHSIKRCKHFEIGGDKK 112
>sp|P52809|RL44_PICJA 60S RIBOSOMAL PROTEIN L44 (L41) gi|1255906|dbj|BAA11057.1|
ribosomal protein L41 [Pichia jadinii]
Length = 106
Score = 162 bits (410), Expect = 2e-39
Identities = 75/99 (75%), Positives = 84/99 (84%), Gaps = 2/99 (2%)
Frame = +3
Query: 27 MVNVPKTKRAFCKG--CKKHMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHK 200
MVNVPKT+R +CKG C+KH KVTQYK GKASL+AQGKRRYDRKQSGYGGQTKPVFHK
Sbjct: 1 MVNVPKTRRTYCKGKECRKHTQHKVTQYKAGKASLFAQGKRRYDRKQSGYGGQTKPVFHK 60
Query: 201 KAKTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKKK 317
KAKTTKK+VLR++C CK LKRCKHFE+GGDKK+
Sbjct: 61 KAKTTKKVVLRLECVVCKTKAQLALKRCKHFELGGDKKQ 99
>gb|AAM94276.1| ribosomal protein L44 [Chlamys farreri]
Length = 106
Score = 161 bits (408), Expect = 4e-39
Identities = 74/99 (74%), Positives = 84/99 (84%), Gaps = 2/99 (2%)
Frame = +3
Query: 27 MVNVPKTKRAFCKG--CKKHMMMKVTQYKTGKASLYAQGKRRYDRKQSGYGGQTKPVFHK 200
MVN+PK+++ FCKG CKKH + KVTQYKTG+ASLYAQGKRRYDRKQSGYGGQTKP+F K
Sbjct: 1 MVNIPKSRKTFCKGKKCKKHTLHKVTQYKTGRASLYAQGKRRYDRKQSGYGGQTKPIFRK 60
Query: 201 KAKTTKKIVLRMQCQECKQTCMKGLKRCKHFEIGGDKKK 317
KAKTTKKI LRM+C CK LKRCKHFE+GGDKK+
Sbjct: 61 KAKTTKKITLRMECTSCKYRKQLSLKRCKHFELGGDKKR 99
