KCC000747A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000747A_C01 KCC000747A_c01
gtgCAAACTCATCAGTTGCTGCACAACTCGTTACGTCTGATACCTATAGCACGACCTTCG
CAAGGCCACACGATCACCAGCGGCCGCGTTCTTGCGGTTCTGCATCATCAAATACAGGGG
CGCCCACGCAGCTGTGGACGGACTTCCTGATCGCCTTTGGTTTGTACGCGTCTGTGGAGC
GCTGAAGGGCGCTGCTTGCGAACAGCTGTGTTTGAGCCAGCCCGGGCGTTAGGGGCTGCG
GGTGACACTTGTTGCGAACTTTGCTCCACGCAGCGCAAGTACTGCGAGGAGCATAGTGCG
CATTGTCATGCTCAAGCTCAAAGCGGGGCCAGGCGTTGCTCAACAACGCGCTCCATCGGG
CTGCGCGCACGTTCCTTGCTTACGCCCACTATCAGCGCCCGCTGCGGGGGTTCAGGCACG
GTCGCTGAGCTGGGCAGGCGTGTCGGGGAGCCCATGCCGATGGCTTGCACCGCGCCATCA
TCGTTTGCAGCGACGCATCGCTGCTGCTAGTGGCGGCCAGCAGCAGCCATCCGATGTGCG
TGTGAATGACGGCGGGAGCGATGCAGTGTCGAACGGAGCTTCGCAGAATGGAACCGGAAG
CAGTGCGAATGGTTACCAGCTCAGCACAAATGGAGCTGCAGCGGCGCTGCCCTTGCCAGT
GGCATCGCCAGAGGTTGCAGAGGTCATGAACACGCGGCCACATCGCTGGAACGTGGTCGT
AATGATTGCGGTCGCCTTTGTGCTGTGCAACATGGACAAGGTAAACATGTCGGTGGCGGT
GATACCCATGGCGGCGGAGCTGGGGTGGTCCGCCACGGAGCGCGGCCTGGTGTCGTCGTC
CTTCTTCTGGGGCTACTCCGCCACGCAGCTGCCCGCCGGCTACATCAGCACCA


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000747A_C01 KCC000747A_c01
         (893 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

dbj|BAA99565.1| homolog of an Oryza sative unknown protein [Chlo...    94  4e-18
ref|NP_197538.1| hypothetical protein [Arabidopsis thaliana]           87  3e-16
ref|NP_850136.1| inorganic phosphate transporter, putative [Arab...    83  7e-15
gb|AAL32642.1| putative Na+-dependent inorganic phosphate cotran...    83  7e-15
ref|NP_180526.1| inorganic phosphate transporter, putative [Arab...    83  7e-15

>dbj|BAA99565.1| homolog of an Oryza sative unknown protein [Chlorella vulgaris]
          Length = 126

 Score = 93.6 bits (231), Expect = 4e-18
 Identities = 40/65 (61%), Positives = 52/65 (79%)
 Frame = +2

Query: 698 PHRWNVVVMIAVAFVLCNMDKVNMSVAVIPMAAELGWSATERGLVSSSFFWGYSATQLPA 877
           P RW VV   ++AFV+CNMDKVN+SVA+IPMA + GWS T  GLV SSFF+GY+ TQ+P 
Sbjct: 54  PARWKVVAATSLAFVICNMDKVNISVAIIPMAQDFGWSPTVSGLVQSSFFYGYALTQIPG 113

Query: 878 GYIST 892
           GY+++
Sbjct: 114 GYVTS 118

>ref|NP_197538.1| hypothetical protein [Arabidopsis thaliana]
          Length = 383

 Score = 87.4 bits (215), Expect = 3e-16
 Identities = 42/87 (48%), Positives = 60/87 (68%), Gaps = 6/87 (6%)
 Frame = +2

Query: 647 LPLP-VASPEVAEVMN-----TRPHRWNVVVMIAVAFVLCNMDKVNMSVAVIPMAAELGW 808
           LP+P V S E     N       P R+ ++   ++AFV+CNMDKVN+S+A+IPM+ + GW
Sbjct: 73  LPIPEVLSTETGFEQNWPPWKNIPQRYKLIGATSLAFVICNMDKVNLSIAIIPMSHQFGW 132

Query: 809 SATERGLVSSSFFWGYSATQLPAGYIS 889
           S++  GLV SSFFWGY+ +QLP G++S
Sbjct: 133 SSSVAGLVQSSFFWGYALSQLPGGWLS 159

>ref|NP_850136.1| inorganic phosphate transporter, putative [Arabidopsis thaliana]
           gi|25082713|gb|AAN71994.1| putative Na+-dependent
           inorganic phosphate cotransporter [Arabidopsis thaliana]
           gi|30725652|gb|AAP37848.1| At2g29650 [Arabidopsis
           thaliana]
          Length = 398

 Score = 82.8 bits (203), Expect = 7e-15
 Identities = 34/61 (55%), Positives = 46/61 (74%)
 Frame = +2

Query: 698 PHRWNVVVMIAVAFVLCNMDKVNMSVAVIPMAAELGWSATERGLVSSSFFWGYSATQLPA 877
           P RW +V++   AF+LCNMD+VNMS+A++PM+AE GW+    GL+ SSFFWGY  TQ+  
Sbjct: 100 PKRWVIVLLCFSAFLLCNMDRVNMSIAILPMSAEYGWNPATVGLIQSSFFWGYLLTQIAG 159

Query: 878 G 880
           G
Sbjct: 160 G 160

>gb|AAL32642.1| putative Na+-dependent inorganic phosphate cotransporter
           [Arabidopsis thaliana] gi|21387197|gb|AAM48002.1|
           putative Na+-dependent inorganic phosphate cotransporter
           [Arabidopsis thaliana]
          Length = 512

 Score = 82.8 bits (203), Expect = 7e-15
 Identities = 34/61 (55%), Positives = 46/61 (74%)
 Frame = +2

Query: 698 PHRWNVVVMIAVAFVLCNMDKVNMSVAVIPMAAELGWSATERGLVSSSFFWGYSATQLPA 877
           P RW +V++   AF+LCNMD+VNMS+A++PM+AE GW+    GL+ SSFFWGY  TQ+  
Sbjct: 100 PKRWVIVLLCFSAFLLCNMDRVNMSIAILPMSAEYGWNPATVGLIQSSFFWGYLLTQIAG 159

Query: 878 G 880
           G
Sbjct: 160 G 160

>ref|NP_180526.1| inorganic phosphate transporter, putative [Arabidopsis thaliana]
           gi|25296871|pir||H84698 hypothetical protein At2g29650
           [imported] - Arabidopsis thaliana
           gi|3582333|gb|AAC35230.1| putative Na+-dependent
           inorganic phosphate cotransporter [Arabidopsis thaliana]
          Length = 512

 Score = 82.8 bits (203), Expect = 7e-15
 Identities = 34/61 (55%), Positives = 46/61 (74%)
 Frame = +2

Query: 698 PHRWNVVVMIAVAFVLCNMDKVNMSVAVIPMAAELGWSATERGLVSSSFFWGYSATQLPA 877
           P RW +V++   AF+LCNMD+VNMS+A++PM+AE GW+    GL+ SSFFWGY  TQ+  
Sbjct: 100 PKRWVIVLLCFSAFLLCNMDRVNMSIAILPMSAEYGWNPATVGLIQSSFFWGYLLTQIAG 159

Query: 878 G 880
           G
Sbjct: 160 G 160



EST assemble image


clone accession position
1 MXL001e09_r BP092968 1 500
2 MXL019a05_r BP094168 1 472
3 LCL091c07_r BP094168 5 295
4 MXL072e05_r BP097249 10 389
5 LCL056h12_r BP097249 11 473
6 CL60c12_r AV396356 12 481
7 LCL003g03_r AV396356 12 216
8 LCL027f11_r AV396356 13 324
9 LCL073d01_r AV396356 18 434
10 LCL063f03_r AV396356 21 552
11 MXL096d11_r BP098623 24 417
12 MXL081b05_r BP097774 27 468
13 HCL066h04_r BP097774 34 500
14 LCL086e09_r BP097774 34 554
15 LCL067f01_r BP097774 44 578
16 MXL005a02_r BP093206 47 547
17 MXL050b09_r BP095964 125 520
18 LCL086a10_r BP095964 174 646
19 MXL092f11_r BP098394 175 653
20 MXL039b02_r BP095266 222 402
21 HCL042b11_r BP095266 403 891
22 MXL015f02_r BP093918 415 694




Chlamydomonas reinhardtii
Kazusa DNA Research Institute