>KCC000746A_C01 KCC000746A_c01
cctgtagaaaTTAGTCTAAAACAGATCAACAATTTCACCGAGTCCAATACTCATGGACAC
ACGGTAGCTGCAGCCTCTTTCTCCGCAAACTCAACGCTTCTAGCTTCCAGCTTACAATCT
CTGGCCCTGAGGGGCCCAGTCAACGGGCTTGCTTGTGCCGATCGGGCGAGGTCGGCACCC
GAGGCTAGCGCCCCCTCTGGGGCTGTTCCTGCCTACCTAGGGACGAGGCCTACGGCAGGA
GGCCTAGGGCGCCATGGCCAGCTCTATCCGCTTCAAGTTCCGGGCTGAGCTGTCTTACAG
CAACCTGCCCTTCGATGGCCACTACATCACGGTCGGCGAGCTCAAGCGGCTCATCGCCGA
GAGGAAGGGCCTTGGCGTTGACGCAGCCAACGAGCTGCAGCTCACGGACGCAACCAGCAA
ACGGGACTATGACAACGACGCAGAGCAGGTCATGAAGAACTCGGCGGTAATCGTGCGGCG
CGTCGCCGGCGCAGACAAGCCGACAACCTTATTGAGCAGCTCAGC

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000746A_C01 KCC000746A_c01
         (525 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_611884.1| CG3231-PA [Drosophila melanogaster] gi|4972740|...    64  9e-10
ref|NP_778188.1| RIKEN cDNA C030034J04 [Mus musculus] gi|1948418...    59  3e-08
ref|XP_341922.1| similar to RIKEN cDNA C030034J04 [Rattus norveg...    59  3e-08
ref|NP_008841.2| retinoblastoma-binding protein 6 isoform 1; pro...    58  8e-08
ref|NP_061173.1| retinoblastoma-binding protein 6 isoform 2; pro...    58  8e-08

>ref|NP_611884.1| CG3231-PA [Drosophila melanogaster] gi|4972740|gb|AAD34765.1|
           unknown [Drosophila melanogaster]
           gi|7291741|gb|AAF47162.1| CG3231-PA [Drosophila
           melanogaster]
          Length = 1231

 Score = 64.3 bits (155), Expect = 9e-10
 Identities = 29/74 (39%), Positives = 51/74 (68%)
 Frame = +2

Query: 263 SIRFKFRAELSYSNLPFDGHYITVGELKRLIAERKGLGVDAANELQLTDATSKRDYDNDA 442
           S+ +KF++ L++  + FDG +I+VG+LKR I ++K LG     +LQ+T+A SK +Y +D 
Sbjct: 2   SVHYKFKSTLNFDTITFDGLHISVGDLKREIVQQKRLGKIIDFDLQITNAQSKEEYKDDG 61

Query: 443 EQVMKNSAVIVRRV 484
             + KN+ +I+ R+
Sbjct: 62  FLIPKNTTLIISRI 75

>ref|NP_778188.1| RIKEN cDNA C030034J04 [Mus musculus] gi|19484189|gb|AAH25874.1|
           RIKEN cDNA C030034J04 [Mus musculus]
           gi|26337511|dbj|BAC32441.1| unnamed protein product [Mus
           musculus] gi|26349079|dbj|BAC38179.1| unnamed protein
           product [Mus musculus]
          Length = 123

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 30/75 (40%), Positives = 52/75 (69%)
 Frame = +2

Query: 260 SSIRFKFRAELSYSNLPFDGHYITVGELKRLIAERKGLGVDAANELQLTDATSKRDYDND 439
           S + +KF ++L+Y  + FDG +I++ +LK+ I  R+ L   A ++LQ+T+A +K +Y +D
Sbjct: 2   SCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKA-ADSDLQITNAQTKEEYTDD 60

Query: 440 AEQVMKNSAVIVRRV 484
              + KNS+VIVRR+
Sbjct: 61  NALIPKNSSVIVRRI 75

>ref|XP_341922.1| similar to RIKEN cDNA C030034J04 [Rattus norvegicus]
          Length = 123

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 30/75 (40%), Positives = 52/75 (69%)
 Frame = +2

Query: 260 SSIRFKFRAELSYSNLPFDGHYITVGELKRLIAERKGLGVDAANELQLTDATSKRDYDND 439
           S + +KF ++L+Y  + FDG +I++ +LK+ I  R+ L   A ++LQ+T+A +K +Y +D
Sbjct: 2   SCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKA-ADSDLQITNAQTKEEYTDD 60

Query: 440 AEQVMKNSAVIVRRV 484
              + KNS+VIVRR+
Sbjct: 61  NALIPKNSSVIVRRI 75

>ref|NP_008841.2| retinoblastoma-binding protein 6 isoform 1; proliferation
           potential-related protein; RB-binding Q-protein 1 [Homo
           sapiens] gi|31711501|dbj|BAC77636.1| retinoblastoma
           binding protein 6 isoform 1 [Homo sapiens]
          Length = 1792

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 30/75 (40%), Positives = 51/75 (68%)
 Frame = +2

Query: 260 SSIRFKFRAELSYSNLPFDGHYITVGELKRLIAERKGLGVDAANELQLTDATSKRDYDND 439
           S + +KF ++L+Y  + FDG +I++ +LK+ I  R+ L   A  +LQ+T+A +K +Y +D
Sbjct: 2   SCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKA-ADCDLQITNAQTKEEYTDD 60

Query: 440 AEQVMKNSAVIVRRV 484
              + KNS+VIVRR+
Sbjct: 61  NALIPKNSSVIVRRI 75

>ref|NP_061173.1| retinoblastoma-binding protein 6 isoform 2; proliferation
           potential-related protein; RB-binding Q-protein 1 [Homo
           sapiens] gi|31711503|dbj|BAC77637.1| retinoblastoma
           binding protein 6 isoform 2 [Homo sapiens]
          Length = 1758

 Score = 57.8 bits (138), Expect = 8e-08
 Identities = 30/75 (40%), Positives = 51/75 (68%)
 Frame = +2

Query: 260 SSIRFKFRAELSYSNLPFDGHYITVGELKRLIAERKGLGVDAANELQLTDATSKRDYDND 439
           S + +KF ++L+Y  + FDG +I++ +LK+ I  R+ L   A  +LQ+T+A +K +Y +D
Sbjct: 2   SCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKA-ADCDLQITNAQTKEEYTDD 60

Query: 440 AEQVMKNSAVIVRRV 484
              + KNS+VIVRR+
Sbjct: 61  NALIPKNSSVIVRRI 75

EST assemble image

clone accession position 1 LCL094c05_r AV631451 1 279 2 CL60c11_r AV396368 11 525

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