Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000743A_C01 KCC000743A_c01
(531 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_641886.1| conserved hypothetical protein [Xanthomonas axo... 43 0.003
emb|CAB88103.2| dJ310O13.5 (novel protein similar to H. roretzi ... 43 0.003
ref|NP_542192.2| chromosome 20 open reading frame 160 [Homo sapi... 43 0.003
sp|Q9NUG4|CTG0_HUMAN Protein C20orf160 43 0.003
ref|NP_542017.1| TRNA PSEUDOURIDINE SYNTHASE A [Brucella meliten... 42 0.005
>ref|NP_641886.1| conserved hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306] gi|21107734|gb|AAM36422.1| conserved
hypothetical protein [Xanthomonas axonopodis pv. citri
str. 306]
Length = 244
Score = 42.7 bits (99), Expect = 0.003
Identities = 37/98 (37%), Positives = 41/98 (41%), Gaps = 3/98 (3%)
Frame = +2
Query: 89 RPAAREDGQNDQQGQINPAAGGTRPEQAVGPQE---AVAVHSGNERSTAGSKAWQQLWRG 259
RPAAR G + PA GG RP QA GPQ A A ER A
Sbjct: 27 RPAARAHGNGGK-----PAPGGNRPGQARGPQRPHAAAATDGHGERKPA----------- 70
Query: 260 GRA*GQPRRRHGGGQRPGARWPHLQQAAGDPRYAHDAK 373
G+P RRH G +PGA P Q A D R A+
Sbjct: 71 ----GRPERRHDG--KPGAA-PRPQHPAADRRGPRPAR 101
>emb|CAB88103.2| dJ310O13.5 (novel protein similar to H. roretzi HRPET-3) [Homo
sapiens]
Length = 536
Score = 42.7 bits (99), Expect = 0.003
Identities = 40/140 (28%), Positives = 50/140 (35%), Gaps = 10/140 (7%)
Frame = +2
Query: 137 NPAAGGTRPEQAVGPQEAVAVHSGNERSTAGSKAWQQLWRGGRA*GQPRRRHGGG----- 301
+P G P G E V + R T S W+ W GG A + R GGG
Sbjct: 134 SPGGAGRDPGPPGGAPEKRRVGTAERRHTICSLDWRMGWGGGAA--EARAGGGGGGSLER 191
Query: 302 QRPGAR----WPHLQQAAGDPRYAHDAKGGGSSCSKWYQRHAAKATTRPTASLE*GVERG 469
QR GAR W Q +G H GGG G +
Sbjct: 192 QRAGARASGSWERRQTFSGSWERRHGGGGGGG-----------------------GAGKP 228
Query: 470 GGRVAWQHRR-NAGGAGGWE 526
GG +W+ R+ +GG G WE
Sbjct: 229 GG--SWERRQAGSGGGGSWE 246
Score = 33.9 bits (76), Expect = 1.3
Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Frame = +2
Query: 83 GGRPAAREDGQNDQQGQINPAAGGTRPEQAVGPQEAVAVHSGN---ERSTAGSKAWQQLW 253
GG P R G +++ I + R G EA A G ER AG++A
Sbjct: 146 GGAPEKRRVGTAERRHTI--CSLDWRMGWGGGAAEARAGGGGGGSLERQRAGARASGSWE 203
Query: 254 RGGRA*GQPRRRHGGGQ------RPGARWPHLQQAAGDPRYAHDAKGGGSSCSKWYQRH 412
R G RRHGGG +PG W Q +G GGGS W +RH
Sbjct: 204 RRQTFSGSWERRHGGGGGGGGAGKPGGSWERRQAGSG---------GGGS----WERRH 249
>ref|NP_542192.2| chromosome 20 open reading frame 160 [Homo sapiens]
gi|20987738|gb|AAH30254.1| Chromosome 20 open reading
frame 160 [Homo sapiens]
Length = 433
Score = 42.7 bits (99), Expect = 0.003
Identities = 40/140 (28%), Positives = 50/140 (35%), Gaps = 10/140 (7%)
Frame = +2
Query: 137 NPAAGGTRPEQAVGPQEAVAVHSGNERSTAGSKAWQQLWRGGRA*GQPRRRHGGG----- 301
+P G P G E V + R T S W+ W GG A + R GGG
Sbjct: 169 SPGGAGRDPGPPGGAPEKRRVGTAERRHTICSLDWRMGWGGGAA--EARAGGGGGGSLER 226
Query: 302 QRPGAR----WPHLQQAAGDPRYAHDAKGGGSSCSKWYQRHAAKATTRPTASLE*GVERG 469
QR GAR W Q +G H GGG G +
Sbjct: 227 QRAGARASGSWERRQTFSGSWERRHGGGGGGG-----------------------GAGKP 263
Query: 470 GGRVAWQHRR-NAGGAGGWE 526
GG +W+ R+ +GG G WE
Sbjct: 264 GG--SWERRQAGSGGGGSWE 281
Score = 33.9 bits (76), Expect = 1.3
Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Frame = +2
Query: 83 GGRPAAREDGQNDQQGQINPAAGGTRPEQAVGPQEAVAVHSGN---ERSTAGSKAWQQLW 253
GG P R G +++ I + R G EA A G ER AG++A
Sbjct: 181 GGAPEKRRVGTAERRHTI--CSLDWRMGWGGGAAEARAGGGGGGSLERQRAGARASGSWE 238
Query: 254 RGGRA*GQPRRRHGGGQ------RPGARWPHLQQAAGDPRYAHDAKGGGSSCSKWYQRH 412
R G RRHGGG +PG W Q +G GGGS W +RH
Sbjct: 239 RRQTFSGSWERRHGGGGGGGGAGKPGGSWERRQAGSG---------GGGS----WERRH 284
>sp|Q9NUG4|CTG0_HUMAN Protein C20orf160
Length = 571
Score = 42.7 bits (99), Expect = 0.003
Identities = 40/140 (28%), Positives = 50/140 (35%), Gaps = 10/140 (7%)
Frame = +2
Query: 137 NPAAGGTRPEQAVGPQEAVAVHSGNERSTAGSKAWQQLWRGGRA*GQPRRRHGGG----- 301
+P G P G E V + R T S W+ W GG A + R GGG
Sbjct: 169 SPGGAGRDPGPPGGAPEKRRVGTAERRHTICSLDWRMGWGGGAA--EARAGGGGGGSLER 226
Query: 302 QRPGAR----WPHLQQAAGDPRYAHDAKGGGSSCSKWYQRHAAKATTRPTASLE*GVERG 469
QR GAR W Q +G H GGG G +
Sbjct: 227 QRAGARASGSWERRQTFSGSWERRHGGGGGGG-----------------------GAGKP 263
Query: 470 GGRVAWQHRR-NAGGAGGWE 526
GG +W+ R+ +GG G WE
Sbjct: 264 GG--SWERRQAGSGGGGSWE 281
Score = 33.9 bits (76), Expect = 1.3
Identities = 37/119 (31%), Positives = 46/119 (38%), Gaps = 9/119 (7%)
Frame = +2
Query: 83 GGRPAAREDGQNDQQGQINPAAGGTRPEQAVGPQEAVAVHSGN---ERSTAGSKAWQQLW 253
GG P R G +++ I + R G EA A G ER AG++A
Sbjct: 181 GGAPEKRRVGTAERRHTI--CSLDWRMGWGGGAAEARAGGGGGGSLERQRAGARASGSWE 238
Query: 254 RGGRA*GQPRRRHGGGQ------RPGARWPHLQQAAGDPRYAHDAKGGGSSCSKWYQRH 412
R G RRHGGG +PG W Q +G GGGS W +RH
Sbjct: 239 RRQTFSGSWERRHGGGGGGGGAGKPGGSWERRQAGSG---------GGGS----WERRH 284
>ref|NP_542017.1| TRNA PSEUDOURIDINE SYNTHASE A [Brucella melitensis]
gi|25527732|pir||AF3639 pseudouridylate synthase (EC
4.2.1.70) [imported] - Brucella melitensis (strain 16M)
gi|17985257|gb|AAL54281.1| TRNA PSEUDOURIDINE SYNTHASE A
[Brucella melitensis 16M]
Length = 565
Score = 42.0 bits (97), Expect = 0.005
Identities = 43/143 (30%), Positives = 57/143 (39%), Gaps = 5/143 (3%)
Frame = +2
Query: 62 ESRREQMGGRPAAREDGQNDQQGQINPAAGGTRPEQAVGPQEAVAVHSGNERSTAGSKAW 241
E R E+ GGRP RE + + G E+ G +E + + ++T K
Sbjct: 431 EGRFEREGGRPDNREKYEKHE---------GAGKERRPGKRERAELRNAEGQTTERGKGG 481
Query: 242 QQLWRGGRA*GQPRR--RHGGGQRPGARWPHLQ--QAAGD-PRYAHDAKGGGSSCSKWYQ 406
+ + G+ G PR R GG R P + AGD PR HD K GG K
Sbjct: 482 SEGRKPGKP-GGPRSEGRFGGADRDTRSGPRGSGPRGAGDGPRRGHDGKPGGKPGGKPTG 540
Query: 407 RHAAKATTRPTASLE*GVERGGG 475
R K T+P G GGG
Sbjct: 541 RPGGKPGTKPGG----GGRSGGG 559
