Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000740A_C01 KCC000740A_c01
(593 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_176215.1| gamma-adaptin, putative [Arabidopsis thaliana] ... 235 3e-61
gb|AAK98709.1|AC069158_21 Putative gamma-adaptin 1 [Oryza sativa] 232 3e-60
emb|CAB39730.1| adaptor protein complex AP-1 large subunit; gamm... 228 4e-59
ref|NP_173802.1| gamma-adaptin, putative [Arabidopsis thaliana] ... 228 4e-59
pir||T51951 gamma-adaptin 1 [imported] - Arabidopsis thaliana gi... 228 4e-59
>ref|NP_176215.1| gamma-adaptin, putative [Arabidopsis thaliana]
gi|25404261|pir||B96625 hypothetical protein T2K10.12
[imported] - Arabidopsis thaliana
gi|4249386|gb|AAD14483.1|AAD14483 Strong similarity to
gb|AF061286 gamma-adaptin 1 from Arabidopsis thaliana.
EST gb|H37393 comes from this gene
Length = 867
Score = 235 bits (600), Expect = 3e-61
Identities = 119/161 (73%), Positives = 137/161 (84%)
Frame = +3
Query: 111 RLRDLIKQVRACKTAAEEREVIAKESAALREAFRDQDQSYRHRNVAKLMYIHMLGYPTHF 290
RL D+I+ +RA KTAAEER V+ KE AA+R + + DQ YRHR++AKLM+IHMLGYPTHF
Sbjct: 9 RLSDMIRAIRASKTAAEERAVVRKECAAIRASINENDQDYRHRDLAKLMFIHMLGYPTHF 68
Query: 291 GQMETLKLIAGSGFPEKRMGYLGLMILLDERQEVLMLVTNSLKMDLNNTKNPYIVGLALV 470
GQME LKLIA GFPEKR+GYLGLM+LLDERQEVLMLVTNSLK DLN+T N YIVGLAL
Sbjct: 69 GQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHT-NQYIVGLALC 127
Query: 471 ALGNICSAEMARDLAPDVEKLMDSSMDYIRKKAALCAIRVV 593
ALGNICSAEMARDLAP+VE+L+ IRKKAALCAIR++
Sbjct: 128 ALGNICSAEMARDLAPEVERLLQFRDPNIRKKAALCAIRII 168
>gb|AAK98709.1|AC069158_21 Putative gamma-adaptin 1 [Oryza sativa]
Length = 1354
Score = 232 bits (592), Expect = 3e-60
Identities = 117/161 (72%), Positives = 138/161 (85%)
Frame = +3
Query: 111 RLRDLIKQVRACKTAAEEREVIAKESAALREAFRDQDQSYRHRNVAKLMYIHMLGYPTHF 290
RLRD+I+ +RACKTAAEER V+ +E A +REA + Q RHRN+AKLM+IHMLGYPTHF
Sbjct: 25 RLRDMIRAIRACKTAAEERAVVRRECAEIREAIGENQQEIRHRNMAKLMFIHMLGYPTHF 84
Query: 291 GQMETLKLIAGSGFPEKRMGYLGLMILLDERQEVLMLVTNSLKMDLNNTKNPYIVGLALV 470
GQME LKLIA +G+PEKR+GYLGLM+LLDERQEVLMLVTNSLK DLN++ N +IVGLAL
Sbjct: 85 GQMECLKLIAAAGYPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHS-NQFIVGLALC 143
Query: 471 ALGNICSAEMARDLAPDVEKLMDSSMDYIRKKAALCAIRVV 593
ALGNICSAEMARDL+P+VE+LM S +KKAALCAIR+V
Sbjct: 144 ALGNICSAEMARDLSPEVERLMRSRDVNTKKKAALCAIRIV 184
>emb|CAB39730.1| adaptor protein complex AP-1 large subunit; gamma-adaptin 2
[Arabidopsis thaliana]
Length = 876
Score = 228 bits (582), Expect = 4e-59
Identities = 115/161 (71%), Positives = 134/161 (82%)
Frame = +3
Query: 111 RLRDLIKQVRACKTAAEEREVIAKESAALREAFRDQDQSYRHRNVAKLMYIHMLGYPTHF 290
RLRD+I+ +RACKTAAEER V+ KE A +R + D RHRN+AKLM+IHMLGYPTHF
Sbjct: 9 RLRDMIRAIRACKTAAEERAVVRKECADIRALINEDDPHDRHRNLAKLMFIHMLGYPTHF 68
Query: 291 GQMETLKLIAGSGFPEKRMGYLGLMILLDERQEVLMLVTNSLKMDLNNTKNPYIVGLALV 470
GQME LKLIA GFPEKR+GYLGLM+LLDERQEVLMLVTNSLK DLN++ N Y+VGLAL
Sbjct: 69 GQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHS-NQYVVGLALC 127
Query: 471 ALGNICSAEMARDLAPDVEKLMDSSMDYIRKKAALCAIRVV 593
ALGNICSAEMARDLAP+VE+L+ IRKKAALC+ R++
Sbjct: 128 ALGNICSAEMARDLAPEVERLIQFRDPNIRKKAALCSTRII 168
>ref|NP_173802.1| gamma-adaptin, putative [Arabidopsis thaliana]
gi|30688616|ref|NP_849701.1| gamma-adaptin, putative
[Arabidopsis thaliana] gi|28393791|gb|AAO42305.1|
putative gamma-adaptin [Arabidopsis thaliana]
gi|28973305|gb|AAO63977.1| putative gamma-adaptin
[Arabidopsis thaliana]
Length = 876
Score = 228 bits (582), Expect = 4e-59
Identities = 115/161 (71%), Positives = 134/161 (82%)
Frame = +3
Query: 111 RLRDLIKQVRACKTAAEEREVIAKESAALREAFRDQDQSYRHRNVAKLMYIHMLGYPTHF 290
RLRD+I+ +RACKTAAEER V+ KE A +R + D RHRN+AKLM+IHMLGYPTHF
Sbjct: 9 RLRDMIRAIRACKTAAEERAVVRKECADIRALINEDDPHDRHRNLAKLMFIHMLGYPTHF 68
Query: 291 GQMETLKLIAGSGFPEKRMGYLGLMILLDERQEVLMLVTNSLKMDLNNTKNPYIVGLALV 470
GQME LKLIA GFPEKR+GYLGLM+LLDERQEVLMLVTNSLK DLN++ N Y+VGLAL
Sbjct: 69 GQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHS-NQYVVGLALC 127
Query: 471 ALGNICSAEMARDLAPDVEKLMDSSMDYIRKKAALCAIRVV 593
ALGNICSAEMARDLAP+VE+L+ IRKKAALC+ R++
Sbjct: 128 ALGNICSAEMARDLAPEVERLIQFRDPNIRKKAALCSTRII 168
>pir||T51951 gamma-adaptin 1 [imported] - Arabidopsis thaliana
gi|3372671|gb|AAC28338.1| gamma-adaptin 1 [Arabidopsis
thaliana] gi|4704741|gb|AAD28247.1|AF124524_1
gamma-adaptin 1 [Arabidopsis thaliana]
Length = 876
Score = 228 bits (582), Expect = 4e-59
Identities = 115/161 (71%), Positives = 134/161 (82%)
Frame = +3
Query: 111 RLRDLIKQVRACKTAAEEREVIAKESAALREAFRDQDQSYRHRNVAKLMYIHMLGYPTHF 290
RLRD+I+ +RACKTAAEER V+ KE A +R + D RHRN+AKLM+IHMLGYPTHF
Sbjct: 9 RLRDMIRAIRACKTAAEERAVVRKECADIRALINEDDPHDRHRNLAKLMFIHMLGYPTHF 68
Query: 291 GQMETLKLIAGSGFPEKRMGYLGLMILLDERQEVLMLVTNSLKMDLNNTKNPYIVGLALV 470
GQME LKLIA GFPEKR+GYLGLM+LLDERQEVLMLVTNSLK DLN++ N Y+VGLAL
Sbjct: 69 GQMECLKLIASPGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHS-NQYVVGLALC 127
Query: 471 ALGNICSAEMARDLAPDVEKLMDSSMDYIRKKAALCAIRVV 593
ALGNICSAEMARDLAP+VE+L+ IRKKAALC+ R++
Sbjct: 128 ALGNICSAEMARDLAPEVERLIQFRDPNIRKKAALCSTRII 168
