>KCC000736A_C01 KCC000736A_c01
CTGCACTAGTCCATAAGCCGTTACGCACATTTTGCAAAATGGCCGCTCTGCGCTGCTCTG
TTGCCACTCGCGCGGCCGTCCCGGCTCGCCGCAGCTCCGTCGTGGTGCGCGCCAGCACTG
AGCAGACCACCAAGCGCGCTATGCTGGGCCTGCTGGCTGGTGCCGTCGCTGGTGCCCTGC
TGGTGGCTCCCGCTGAGGCCATCCGCATCCCCTCGCACGAGTTCACCGGCGGTATGGTGA
AGGGCGGCGGCTCTTCCCCCAAGTCGCCCACCGCTGCCTCGATGGAGAGCTACACCCTGG
AGGGCACCAAGAAGCAGGGTGTCTCCCTGAAGACCAAGAAGAAGCTGCTGGCCAAGGTGC
GCGAGAACGCCCAGAAGTCTGCCTCCTCGTAAGCAGCAACAGCTGAGCGCTGCCATGCTG
TGTGGCGGGCATGGGCACGAGTTCCACGTTTGCTGCGCGCACAAAGCTCGCAGATGCGCA
TGATCCGGCGACGGCTGCGTCGTGGCTGGTGCCTAGTCGGAGCCAGCAGCAAAGCGGAGT
ATGCAGGGACGGCAGTCCGCCGAGGTTATTGGTGGATGCTTGAATTGGATGGATTTAGGC
GGTCCGGTTTCTTGGGGCTGCCTCATGCGAACAACGGTCTTTGTG

BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000736A_C01 KCC000736A_c01
         (645 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T08158 hypothetical luminal protein precursor, chloroplast ...   209  2e-53
emb|CAD19511.1| UL36 protein [Pseudorabies virus]                      44  0.003
sp|P12852|PSBQ_CHLRE Oxygen-evolving enhancer protein 3, chlorop...    42  0.006
pir||T01437 hypothetical protein R34001_1 - human gi|2887497|gb|...    41  0.013
gb|AAD41594.1|AF071081_1 proline-rich mucin homolog [Mycobacteri...    41  0.017

>pir||T08158 hypothetical luminal protein precursor, chloroplast - Chlamydomonas
           reinhardtii gi|2462254|emb|CAA65630.1| unknown lumenal
           polypeptide [Chlamydomonas reinhardtii]
          Length = 117

 Score =  209 bits (533), Expect = 2e-53
 Identities = 113/117 (96%), Positives = 113/117 (96%)
 Frame = +3

Query: 39  MAALRCSVATRAAVPARRSSVVVRASTEQTTKRAMLGLLAGAVAGALLVAPAEAIRIPSH 218
           MAALRCSVATRAAVPAR SSVVVRASTEQTTKRAMLGLLAGAVAGALLVAPAEAIRIPSH
Sbjct: 1   MAALRCSVATRAAVPARGSSVVVRASTEQTTKRAMLGLLAGAVAGALLVAPAEAIRIPSH 60

Query: 219 EFTGGMVKGGGSSPKSPTAASMESYTLEGTKKQGVSLKTKKKLLAKVRENAQKSASS 389
           EFTG MVKGGGSSPKS TAASMESYTLEGTKKQGVSLKTKKKLLAKVREN QKSASS
Sbjct: 61  EFTGRMVKGGGSSPKSATAASMESYTLEGTKKQGVSLKTKKKLLAKVRENGQKSASS 117

>emb|CAD19511.1| UL36 protein [Pseudorabies virus]
          Length = 3084

 Score = 43.5 bits (101), Expect = 0.003
 Identities = 41/118 (34%), Positives = 50/118 (41%), Gaps = 12/118 (10%)
 Frame = +1

Query: 85   LAAAPSWCAPALSRPPSALCWA--CWLVPSLVPCWWLPLRPSASPR----------TSSP 228
            L A+P   APA ++PP +   A      PS +       RP+AS            +SS 
Sbjct: 2723 LPASPETPAPAQTQPPRSPLAAPTSLAAPSEIE------RPAASAAAAAAATTTTTSSSS 2776

Query: 229  AVW*RAAALPPSRPPLPRWRATPWRAPRSRVSP*RPRRSCWPRCARTPRSLPPRKQQQ 402
            A    A A PP  PP  R  A P   P SR +P   R    PR   TP  LPP+  QQ
Sbjct: 2777 ATTSSAPAAPPPAPPPSRPAAPPPAPPPSRPAPTPERHGEPPRLMFTPPPLPPQPSQQ 2834

 Score = 33.1 bits (74), Expect = 3.6
 Identities = 32/105 (30%), Positives = 41/105 (38%), Gaps = 2/105 (1%)
 Frame = +1

Query: 97   PSWCAPALSRPPSALCWAC-WLVPSLVPCWWLPLRPSASPRTSSPAVW*RAAALPPSRPP 273
            PS  AP   +PP+    A     P   P    P R         P+    AAA  P +PP
Sbjct: 2308 PSAQAPPAQKPPAQPATAAATTAPKATPQTQPPTRAQTQTAPPPPSAA-TAAAQVPPQPP 2366

Query: 274  LPRWRATPWRAPRSRVSP*RP-RRSCWPRCARTPRSLPPRKQQQL 405
              +  A P  AP +  +P  P  ++  PR A  P   PP  Q  L
Sbjct: 2367 SSQPAAKPRGAPPAPPAPPPPSAQTTLPRPAAPPAPPPPSAQTTL 2411

>sp|P12852|PSBQ_CHLRE Oxygen-evolving enhancer protein 3, chloroplast precursor (OEE3)
           gi|81254|pir||S05509 photosystem II oxygen-evolving
           complex protein 3 precursor - Chlamydomonas reinhardtii
           gi|18164|emb|CAA32061.1| OEE3 precursor protein
           [Chlamydomonas reinhardtii] gi|228626|prf||1807335B
           photosystem II OEE3 protein
          Length = 199

 Score = 42.4 bits (98), Expect = 0.006
 Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
 Frame = +3

Query: 45  ALRCSVATRAAVPARRSSVVVRASTEQTTKRAML-GLLAGAVAGALLVAPAEAIRI 209
           AL   VATR AV +RR +VVVRAS E  ++RA+L GLLA AVA    VAP  A+ +
Sbjct: 2   ALASKVATRPAVASRRGAVVVRASGE--SRRAVLGGLLASAVAA---VAPKAALAL 52

>pir||T01437 hypothetical protein R34001_1 - human gi|2887497|gb|AAC27979.1|
            R34001_1 [Homo sapiens]
          Length = 1007

 Score = 41.2 bits (95), Expect = 0.013
 Identities = 32/100 (32%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
 Frame = -1

Query: 354  WPAASSWSSG--RHPASWCPPGCSSPSRQRWATWGKSRRPSPYRR*TRARGCGWPQ-REP 184
            W   + W+ G  RH  SW PP C S +  R   W                G  WPQ R  
Sbjct: 910  WSPVARWTPGSSRHGLSWSPPSCGSTASWRLNAWW---------------GLVWPQPRLC 954

Query: 183  PAGHQRRHQPAGPA*RAWWSAQ----CWRAPR----RSCG 88
            PA   R H+   P     W AQ    CW   R    R CG
Sbjct: 955  PAQDPRPHRRCTP-----WPAQTCRPCWNTTRSCWCRPCG 989

>gb|AAD41594.1|AF071081_1 proline-rich mucin homolog [Mycobacterium tuberculosis]
          Length = 763

 Score = 40.8 bits (94), Expect = 0.017
 Identities = 38/117 (32%), Positives = 44/117 (37%), Gaps = 3/117 (2%)
 Frame = +1

Query: 43  PLCAALLPLARPSRLAAAPSWCAPALSRPPSALCWACWLVPSLVPCWWLPLRPSASPRTS 222
           P   AL PL       A P    P    PP+  CW   LV +  PC   P  P A P+  
Sbjct: 5   PAPRALAPLPPAPPAPAEPKSKPPFPPAPPAPPCWM--LVSAAPPC---PPAPPAPPKPK 59

Query: 223 SPAVW*RAAALPPSR---PPLPRWRATPWRAPRSRVSP*RPRRSCWPRCARTPRSLP 384
           S A +      PP+R   PPLP     P  APR         R   P C   P  +P
Sbjct: 60  SKAPFPPVPPAPPARELAPPLP---PAPPEAPRE-------SRPALPPCPPPPVVIP 106

EST assemble image

clone accession position 1 CM047e10_r AV388590 1 357 2 LC057b02_r AV622962 5 483 3 LC076f03_r AV624356 5 518 4 CM059g08_r AV390677 5 619 5 HC087d05_r AV638519 8 405 6 CM066f07_r AV390832 8 542 7 CM007c11_r AV386845 10 416 8 MX032a03_r BP087330 10 384 9 LCL072c11_r AV630061 10 414 10 HC044b05_r AV635266 13 470 11 HC001e07_r AV631903 14 514 12 LC074f08_r AV624223 18 503 13 LC070e11_r AV623926 22 476 14 HC066d04_r AV636940 22 542 15 MXL016h12_r BP094012 22 548 16 HC057b03_r AV636255 23 533 17 CM071f10_r AV391369 26 626 18 CL58h02_r AV396216 27 476 19 LCL099d09_r AV631763 28 453 20 LC026h03_r AV620788 28 534 21 CM039g08_r AV388994 37 605 22 LC077c05_r AV624399 38 546 23 HCL006a09_r AV639845 38 447 24 MXL065h04_r BP096849 152 649

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