Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000736A_C01 KCC000736A_c01
(645 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08158 hypothetical luminal protein precursor, chloroplast ... 209 2e-53
emb|CAD19511.1| UL36 protein [Pseudorabies virus] 44 0.003
sp|P12852|PSBQ_CHLRE Oxygen-evolving enhancer protein 3, chlorop... 42 0.006
pir||T01437 hypothetical protein R34001_1 - human gi|2887497|gb|... 41 0.013
gb|AAD41594.1|AF071081_1 proline-rich mucin homolog [Mycobacteri... 41 0.017
>pir||T08158 hypothetical luminal protein precursor, chloroplast - Chlamydomonas
reinhardtii gi|2462254|emb|CAA65630.1| unknown lumenal
polypeptide [Chlamydomonas reinhardtii]
Length = 117
Score = 209 bits (533), Expect = 2e-53
Identities = 113/117 (96%), Positives = 113/117 (96%)
Frame = +3
Query: 39 MAALRCSVATRAAVPARRSSVVVRASTEQTTKRAMLGLLAGAVAGALLVAPAEAIRIPSH 218
MAALRCSVATRAAVPAR SSVVVRASTEQTTKRAMLGLLAGAVAGALLVAPAEAIRIPSH
Sbjct: 1 MAALRCSVATRAAVPARGSSVVVRASTEQTTKRAMLGLLAGAVAGALLVAPAEAIRIPSH 60
Query: 219 EFTGGMVKGGGSSPKSPTAASMESYTLEGTKKQGVSLKTKKKLLAKVRENAQKSASS 389
EFTG MVKGGGSSPKS TAASMESYTLEGTKKQGVSLKTKKKLLAKVREN QKSASS
Sbjct: 61 EFTGRMVKGGGSSPKSATAASMESYTLEGTKKQGVSLKTKKKLLAKVRENGQKSASS 117
>emb|CAD19511.1| UL36 protein [Pseudorabies virus]
Length = 3084
Score = 43.5 bits (101), Expect = 0.003
Identities = 41/118 (34%), Positives = 50/118 (41%), Gaps = 12/118 (10%)
Frame = +1
Query: 85 LAAAPSWCAPALSRPPSALCWA--CWLVPSLVPCWWLPLRPSASPR----------TSSP 228
L A+P APA ++PP + A PS + RP+AS +SS
Sbjct: 2723 LPASPETPAPAQTQPPRSPLAAPTSLAAPSEIE------RPAASAAAAAAATTTTTSSSS 2776
Query: 229 AVW*RAAALPPSRPPLPRWRATPWRAPRSRVSP*RPRRSCWPRCARTPRSLPPRKQQQ 402
A A A PP PP R A P P SR +P R PR TP LPP+ QQ
Sbjct: 2777 ATTSSAPAAPPPAPPPSRPAAPPPAPPPSRPAPTPERHGEPPRLMFTPPPLPPQPSQQ 2834
Score = 33.1 bits (74), Expect = 3.6
Identities = 32/105 (30%), Positives = 41/105 (38%), Gaps = 2/105 (1%)
Frame = +1
Query: 97 PSWCAPALSRPPSALCWAC-WLVPSLVPCWWLPLRPSASPRTSSPAVW*RAAALPPSRPP 273
PS AP +PP+ A P P P R P+ AAA P +PP
Sbjct: 2308 PSAQAPPAQKPPAQPATAAATTAPKATPQTQPPTRAQTQTAPPPPSAA-TAAAQVPPQPP 2366
Query: 274 LPRWRATPWRAPRSRVSP*RP-RRSCWPRCARTPRSLPPRKQQQL 405
+ A P AP + +P P ++ PR A P PP Q L
Sbjct: 2367 SSQPAAKPRGAPPAPPAPPPPSAQTTLPRPAAPPAPPPPSAQTTL 2411
>sp|P12852|PSBQ_CHLRE Oxygen-evolving enhancer protein 3, chloroplast precursor (OEE3)
gi|81254|pir||S05509 photosystem II oxygen-evolving
complex protein 3 precursor - Chlamydomonas reinhardtii
gi|18164|emb|CAA32061.1| OEE3 precursor protein
[Chlamydomonas reinhardtii] gi|228626|prf||1807335B
photosystem II OEE3 protein
Length = 199
Score = 42.4 bits (98), Expect = 0.006
Identities = 31/56 (55%), Positives = 38/56 (67%), Gaps = 1/56 (1%)
Frame = +3
Query: 45 ALRCSVATRAAVPARRSSVVVRASTEQTTKRAML-GLLAGAVAGALLVAPAEAIRI 209
AL VATR AV +RR +VVVRAS E ++RA+L GLLA AVA VAP A+ +
Sbjct: 2 ALASKVATRPAVASRRGAVVVRASGE--SRRAVLGGLLASAVAA---VAPKAALAL 52
>pir||T01437 hypothetical protein R34001_1 - human gi|2887497|gb|AAC27979.1|
R34001_1 [Homo sapiens]
Length = 1007
Score = 41.2 bits (95), Expect = 0.013
Identities = 32/100 (32%), Positives = 36/100 (36%), Gaps = 11/100 (11%)
Frame = -1
Query: 354 WPAASSWSSG--RHPASWCPPGCSSPSRQRWATWGKSRRPSPYRR*TRARGCGWPQ-REP 184
W + W+ G RH SW PP C S + R W G WPQ R
Sbjct: 910 WSPVARWTPGSSRHGLSWSPPSCGSTASWRLNAWW---------------GLVWPQPRLC 954
Query: 183 PAGHQRRHQPAGPA*RAWWSAQ----CWRAPR----RSCG 88
PA R H+ P W AQ CW R R CG
Sbjct: 955 PAQDPRPHRRCTP-----WPAQTCRPCWNTTRSCWCRPCG 989
>gb|AAD41594.1|AF071081_1 proline-rich mucin homolog [Mycobacterium tuberculosis]
Length = 763
Score = 40.8 bits (94), Expect = 0.017
Identities = 38/117 (32%), Positives = 44/117 (37%), Gaps = 3/117 (2%)
Frame = +1
Query: 43 PLCAALLPLARPSRLAAAPSWCAPALSRPPSALCWACWLVPSLVPCWWLPLRPSASPRTS 222
P AL PL A P P PP+ CW LV + PC P P A P+
Sbjct: 5 PAPRALAPLPPAPPAPAEPKSKPPFPPAPPAPPCWM--LVSAAPPC---PPAPPAPPKPK 59
Query: 223 SPAVW*RAAALPPSR---PPLPRWRATPWRAPRSRVSP*RPRRSCWPRCARTPRSLP 384
S A + PP+R PPLP P APR R P C P +P
Sbjct: 60 SKAPFPPVPPAPPARELAPPLP---PAPPEAPRE-------SRPALPPCPPPPVVIP 106
