Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000733A_C01 KCC000733A_c01
(499 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_196789.1| zinc finger transcription factor -related prote... 175 2e-43
gb|AAM20612.1| zinc finger transcription factor-like protein [Ar... 175 2e-43
ref|NP_565962.1| CCCH-type zinc finger protein -related [Arabido... 171 3e-42
pir||E84847 probable CCCH-type zinc finger protein [imported] - ... 171 3e-42
ref|NP_180161.1| CCCH-type zinc finger protein -related [Arabido... 166 1e-40
>ref|NP_196789.1| zinc finger transcription factor -related protein [Arabidopsis
thaliana] gi|11358930|pir||T49899 zinc finger
transcription factor-like protein - Arabidopsis thaliana
gi|7630041|emb|CAB88249.1| zinc finger transcription
factor-like protein [Arabidopsis thaliana]
Length = 706
Score = 175 bits (444), Expect = 2e-43
Identities = 75/110 (68%), Positives = 87/110 (78%), Gaps = 2/110 (1%)
Frame = +2
Query: 110 SPLYKTDEFRMFCFKVLPCSKRYVHDWTVCPFAHPGEKAKRRDPRVFTYTGVACPDMKK- 286
S +Y TDEFRMF FK+ PCS+ Y HDWT CPFAHPGE A+RRDPR F YT V CPD KK
Sbjct: 250 SGIYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYTCVPCPDFKKG 309
Query: 287 -CQRGDACPYAHNVFEYWMHPSRYRTQLCNDGIGCKRKVCFFAHTLEELR 433
C++GD C YAH VFE W+HP++YRT+LC DG+GC R+VCFFAH EELR
Sbjct: 310 SCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHANEELR 359
>gb|AAM20612.1| zinc finger transcription factor-like protein [Arabidopsis
thaliana] gi|22136426|gb|AAM91291.1| zinc finger
transcription factor-like protein [Arabidopsis thaliana]
Length = 706
Score = 175 bits (444), Expect = 2e-43
Identities = 75/110 (68%), Positives = 87/110 (78%), Gaps = 2/110 (1%)
Frame = +2
Query: 110 SPLYKTDEFRMFCFKVLPCSKRYVHDWTVCPFAHPGEKAKRRDPRVFTYTGVACPDMKK- 286
S +Y TDEFRMF FK+ PCS+ Y HDWT CPFAHPGE A+RRDPR F YT V CPD KK
Sbjct: 250 SGIYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYTCVPCPDFKKG 309
Query: 287 -CQRGDACPYAHNVFEYWMHPSRYRTQLCNDGIGCKRKVCFFAHTLEELR 433
C++GD C YAH VFE W+HP++YRT+LC DG+GC R+VCFFAH EELR
Sbjct: 310 SCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHANEELR 359
>ref|NP_565962.1| CCCH-type zinc finger protein -related [Arabidopsis thaliana]
gi|14335106|gb|AAK59832.1| At2g41900/T6D20.20
[Arabidopsis thaliana] gi|20198317|gb|AAB63552.2|
putative CCCH-type zinc finger protein [Arabidopsis
thaliana] gi|20334714|gb|AAM16218.1| At2g41900/T6D20.20
[Arabidopsis thaliana]
Length = 716
Score = 171 bits (434), Expect = 3e-42
Identities = 73/108 (67%), Positives = 85/108 (78%), Gaps = 2/108 (1%)
Frame = +2
Query: 116 LYKTDEFRMFCFKVLPCSKRYVHDWTVCPFAHPGEKAKRRDPRVFTYTGVACPDMKK--C 289
+Y TDEFRM+ FKV PCS+ Y HDWT CPF HPGE A+RRDPR F Y+ V CPD +K C
Sbjct: 256 IYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGAC 315
Query: 290 QRGDACPYAHNVFEYWMHPSRYRTQLCNDGIGCKRKVCFFAHTLEELR 433
+RGD C YAH VFE W+HP++YRT+LC DG GC R+VCFFAHT EELR
Sbjct: 316 RRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELR 363
>pir||E84847 probable CCCH-type zinc finger protein [imported] - Arabidopsis
thaliana
Length = 727
Score = 171 bits (434), Expect = 3e-42
Identities = 73/108 (67%), Positives = 85/108 (78%), Gaps = 2/108 (1%)
Frame = +2
Query: 116 LYKTDEFRMFCFKVLPCSKRYVHDWTVCPFAHPGEKAKRRDPRVFTYTGVACPDMKK--C 289
+Y TDEFRM+ FKV PCS+ Y HDWT CPF HPGE A+RRDPR F Y+ V CPD +K C
Sbjct: 267 IYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVPCPDFRKGAC 326
Query: 290 QRGDACPYAHNVFEYWMHPSRYRTQLCNDGIGCKRKVCFFAHTLEELR 433
+RGD C YAH VFE W+HP++YRT+LC DG GC R+VCFFAHT EELR
Sbjct: 327 RRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELR 374
>ref|NP_180161.1| CCCH-type zinc finger protein -related [Arabidopsis thaliana]
gi|25370533|pir||B84654 probable CCCH-type zinc finger
protein [imported] - Arabidopsis thaliana
gi|3643609|gb|AAC42256.1| putative CCCH-type zinc finger
protein [Arabidopsis thaliana]
gi|13877663|gb|AAK43909.1|AF370590_1 putative CCCH-type
zinc finger protein [Arabidopsis thaliana]
gi|14030625|gb|AAK52987.1|AF375403_1 At2g25900/F17H15.7
[Arabidopsis thaliana] gi|22136536|gb|AAM91054.1|
At2g25900/F17H15.7 [Arabidopsis thaliana]
gi|26449641|dbj|BAC41945.1| putative Cys3His zinc finger
protein ATCTH [Arabidopsis thaliana]
Length = 315
Score = 166 bits (421), Expect = 1e-40
Identities = 74/138 (53%), Positives = 97/138 (69%), Gaps = 5/138 (3%)
Frame = +2
Query: 59 PSSDPKGAGQEAQQAEDSPL---YKTDEFRMFCFKVLPCSKRYVHDWTVCPFAHPGEKAK 229
PS++ + E SPL + +DEFR++ FK+ C++ HDWT CPFAHPGEKA+
Sbjct: 63 PSNELTNDSDSSSGDESSPLTDSFSSDEFRIYEFKIRRCARGRSHDWTECPFAHPGEKAR 122
Query: 230 RRDPRVFTYTGVACPDMKK--CQRGDACPYAHNVFEYWMHPSRYRTQLCNDGIGCKRKVC 403
RRDPR F Y+G ACP+ +K C+RGD+C ++H VFE W+HPSRYRTQ C DG C+R++C
Sbjct: 123 RRDPRKFHYSGTACPEFRKGSCRRGDSCEFSHGVFECWLHPSRYRTQPCKDGTSCRRRIC 182
Query: 404 FFAHTLEELRVSNVKLLP 457
FFAHT E+LRV L P
Sbjct: 183 FFAHTTEQLRVLPCSLDP 200
