KCC000732A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000732A_C01 KCC000732A_c01
cgccggcaaggccatcggcatcatggcggacttcctcaaacacgccatgaccgacccccc
ggctgaggccagcaagaactGCGGCGGCGGCGCGGCGGCGGCGGTGGTTGAACACGGCCA
CGGCCACCACGGCACCCGCAACGCCAACCACCCCGGCCATGGCCATCACGGCATCGGTCA
TGGCGTTGGCCACAAGCGGAACATCTAGTGCTAGCGCTGATGACCTGGTGACAACTGACA
ACAGGGTTCAGGTGCTCGGCGAAGCGCATATGGTGCGTGTGCATTAAGACGACCAGGACC
GCAGCGTGCGCTCTTCGTGATAGATCTGCAGCATGCACATGTCGGAAAGCGTTGGCATCA
GGTGGTGCATTCTTGTGTGGAAAACGTGTGGGAGCTGCGTGGGAGATTCTTGTGTGTAGC
GCGTTGGCGTGTGCGTCATGGCGCAGAGGGCGGTGTGCGTATCTTGGCCATGGTGGGCGC
CCAACGGTAGCCACCTGCGCGATCATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000732A_C01 KCC000732A_c01
         (507 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|O08677|KNG_MOUSE Kininogen precursor [Contains: Bradykinin] g...    42  0.004
ref|NP_191869.1| glycine-rich protein [Arabidopsis thaliana] gi|...    40  0.013
ref|NP_741698.1| putative protein (80.3 kD) (5T676) [Caenorhabdi...    40  0.017
pir||S39079 puff C-8 protein - fungus gnat (Rhynchosciara americ...    39  0.028
ref|XP_346720.1| hypothetical protein XP_346719 [Rattus norvegicus]    39  0.037

>sp|O08677|KNG_MOUSE Kininogen precursor [Contains: Bradykinin]
           gi|1945621|dbj|BAA19743.1| HMW prekininogen [Mus sp.]
          Length = 661

 Score = 42.0 bits (97), Expect = 0.004
 Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
 Frame = +2

Query: 29  DFLKHAMTDPPAEASKNCGGGAAAAVVEHGHGH-HGTRNANHPGHGH-HGIGHGVGHKRN 202
           D+L+H   D          G      V HGHGH HG  + +  GHGH HG GHG GH ++
Sbjct: 477 DYLRHQRED----------GDDHTHTVGHGHGHGHGHGHGHGHGHGHGHGHGHGHGHGKH 526

>ref|NP_191869.1| glycine-rich protein [Arabidopsis thaliana] gi|11358165|pir||T48099
           hypothetical protein T20O10.200 - Arabidopsis thaliana
           gi|7573439|emb|CAB87755.1| putative protein [Arabidopsis
           thaliana]
          Length = 199

 Score = 40.4 bits (93), Expect = 0.013
 Identities = 24/53 (45%), Positives = 27/53 (50%), Gaps = 12/53 (22%)
 Frame = +2

Query: 80  CGG-----GAAAAVVEHGHGH---HGTRNANHP-GHGH---HGIGHGVGHKRN 202
           CGG     G      +H HGH   HG R   H  GHGH   HG GHG GH+R+
Sbjct: 57  CGGRRHDYGRDCCHCDHCHGHGYGHGHREHGHDRGHGHGRGHGHGHGHGHRRH 109

 Score = 36.2 bits (82), Expect(2) = 0.035
 Identities = 19/44 (43%), Positives = 20/44 (45%), Gaps = 15/44 (34%)
 Frame = +2

Query: 113 HGHGH--------HGTRNANHPGHGHH-------GIGHGVGHKR 199
           HGHGH        HG    +H GHGHH       G G G GH R
Sbjct: 102 HGHGHRRHGRDHRHGRDRGHHRGHGHHHHRGHRRGRGRGHGHGR 145

 Score = 21.9 bits (45), Expect(2) = 0.035
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = +1

Query: 10  GHRHHGGLPQTRHDRPPG*GQQELRRRRG 96
           GHR HG      H R  G G     RR G
Sbjct: 82  GHREHGHDRGHGHGRGHGHGHGHGHRRHG 110

>ref|NP_741698.1| putative protein (80.3 kD) (5T676) [Caenorhabditis elegans]
           gi|11359776|pir||T45059 hypothetical protein Y39B6B.gg
           [imported] - Caenorhabditis elegans
           gi|15209353|emb|CAC51077.1| Hypothetical protein
           Y39B6A.1 [Caenorhabditis elegans]
          Length = 735

 Score = 40.0 bits (92), Expect = 0.017
 Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 5/32 (15%)
 Frame = +2

Query: 113 HGHGHHGTRNANHPG-----HGHHGIGHGVGH 193
           HGHGHH   +  H G     HGHHG G+G  H
Sbjct: 593 HGHGHHAPAHHGHHGEHGVHHGHHGAGYGAHH 624

 Score = 36.2 bits (82), Expect = 0.24
 Identities = 17/31 (54%), Positives = 19/31 (60%), Gaps = 4/31 (12%)
 Frame = +2

Query: 113 HG--HGHHGTRN--ANHPGHGHHGIGHGVGH 193
           HG  HGHHGT +  A+H  HG HG  HG  H
Sbjct: 651 HGVHHGHHGTHHSLAHHGHHGGHGTHHGAHH 681

 Score = 35.0 bits (79), Expect = 0.54
 Identities = 16/28 (57%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
 Frame = +2

Query: 119 HGHHGTRN---ANHPGHGHHGIGHGVGH 193
           HGHHG  +   A+H  HGHHG  HGV H
Sbjct: 561 HGHHGEHHHAPAHHGHHGHHG-SHGVHH 587

 Score = 33.9 bits (76), Expect = 1.2
 Identities = 16/30 (53%), Positives = 18/30 (59%), Gaps = 5/30 (16%)
 Frame = +2

Query: 110 EHG--HGHHGTRN---ANHPGHGHHGIGHG 184
           EHG  HGHHG  +   A+H  HG HG  HG
Sbjct: 521 EHGTHHGHHGEHHHAPAHHGHHGEHGTHHG 550

 Score = 33.9 bits (76), Expect = 1.2
 Identities = 14/28 (50%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = +2

Query: 101 AVVEHGH-GHHGTRNANHPGHGHHGIGH 181
           A   HGH GHHG+   +H  H  HG GH
Sbjct: 570 APAHHGHHGHHGSHGVHHGHHESHGHGH 597

 Score = 33.5 bits (75), Expect = 1.6
 Identities = 15/34 (44%), Positives = 18/34 (52%), Gaps = 6/34 (17%)
 Frame = +2

Query: 110 EHGHGHHGTRNANH------PGHGHHGIGHGVGH 193
           +H HG HG  + +H        HGHHG GHG  H
Sbjct: 645 DHHHGSHGVHHGHHGTHHSLAHHGHHG-GHGTHH 677

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 8/31 (25%)
 Frame = +2

Query: 113 HGHGHHGTRNANHPG--------HGHHGIGH 181
           HGHGHH   +  H G        HGHHG  H
Sbjct: 445 HGHGHHSPAHHGHHGEHHHAPAHHGHHGEHH 475

 Score = 32.3 bits (72), Expect = 3.5
 Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
 Frame = +2

Query: 110 EHG--HGHHGTRNANHPGHGHHGIGH 181
           EHG  HGHHG     H  HGHHG  H
Sbjct: 608 EHGVHHGHHGAGYGAH--HGHHGAHH 631

 Score = 32.0 bits (71), Expect = 4.5
 Identities = 12/27 (44%), Positives = 15/27 (55%)
 Frame = +2

Query: 113 HGHGHHGTRNANHPGHGHHGIGHGVGH 193
           HG  HHG+   +H   GHHG  H + H
Sbjct: 643 HGDHHHGSHGVHH---GHHGTHHSLAH 666

 Score = 31.6 bits (70), Expect = 5.9
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +2

Query: 119 HGHHGTRN---ANHPGHGHHGIGHG 184
           HGHHG  +   A+H  HG HG  HG
Sbjct: 503 HGHHGEHHHAPAHHGHHGEHGTHHG 527

 Score = 31.6 bits (70), Expect = 5.9
 Identities = 13/25 (52%), Positives = 15/25 (60%), Gaps = 3/25 (12%)
 Frame = +2

Query: 119 HGHHGTRN---ANHPGHGHHGIGHG 184
           HGHHG  +   A+H  HG HG  HG
Sbjct: 468 HGHHGEHHHAPAHHGHHGEHGTHHG 492

 Score = 31.6 bits (70), Expect = 5.9
 Identities = 13/34 (38%), Positives = 14/34 (40%)
 Frame = +2

Query: 83  GGGAAAAVVEHGHGHHGTRNANHPGHGHHGIGHG 184
           GG        H   HHG   A+H    HHG  HG
Sbjct: 671 GGHGTHHGAHHSPAHHGHHGAHHEHGAHHGAHHG 704

>pir||S39079 puff C-8 protein - fungus gnat (Rhynchosciara americana)
           gi|414686|emb|CAA45878.1| C-8 protein [Rhynchosciara
           americana]
          Length = 457

 Score = 39.3 bits (90), Expect = 0.028
 Identities = 20/41 (48%), Positives = 24/41 (57%), Gaps = 4/41 (9%)
 Frame = +2

Query: 83  GGGAAAAVVEHGHGH---HGTRNANHPGHGH-HGIGHGVGH 193
           G G  +++  H HGH   HG  N N  GHG  HG GHG+GH
Sbjct: 366 GSGIFSSLGGHRHGHSGGHGHVNVNVHGHGSGHGHGHGLGH 406

>ref|XP_346720.1| hypothetical protein XP_346719 [Rattus norvegicus]
          Length = 350

 Score = 38.9 bits (89), Expect = 0.037
 Identities = 26/73 (35%), Positives = 31/73 (41%), Gaps = 6/73 (8%)
 Frame = +1

Query: 4   RQGHRHHGGLPQTRHDRPPG*GQQELRRRRGGGGG*TRPRPPRHP------QRQPPRPWP 165
           R  H  HG   Q R  RP    Q + R      G  T+PRPP HP      Q +PP+P  
Sbjct: 82  RPPHPDHGNQTQPRPPRPGQGNQTQPRPPHPDHGNQTQPRPP-HPDQGNQTQPRPPQPGQ 140

Query: 166 SRHRSWRWPQAEH 204
             H   R P  +H
Sbjct: 141 GNHTHPRPPHPDH 153

 Score = 38.1 bits (87), Expect = 0.063
 Identities = 25/70 (35%), Positives = 29/70 (40%), Gaps = 6/70 (8%)
 Frame = +1

Query: 13  HRHHGGLPQTRHDRPPG*GQQELRRRRGGGGG*TRPRPPRHP------QRQPPRPWPSRH 174
           H  HG   Q R   P    Q + R  + G G  T PRPP HP      Q +PPRP     
Sbjct: 46  HPDHGNQTQPRPPHPDQGNQTQPRPPQPGQGNHTHPRPP-HPDHGNQTQPRPPRPGQGNQ 104

Query: 175 RSWRWPQAEH 204
              R P  +H
Sbjct: 105 TQPRPPHPDH 114

 Score = 35.8 bits (81), Expect = 0.31
 Identities = 25/73 (34%), Positives = 28/73 (38%), Gaps = 6/73 (8%)
 Frame = +1

Query: 4   RQGHRHHGGLPQTRHDRPPG*GQQELRRRRGGGGG*TRPRPPRHP------QRQPPRPWP 165
           R  H  HG   Q R   P    Q + R  + G G  T PRPP HP      Q  PP P  
Sbjct: 108 RPPHPDHGNQTQPRPPHPDQGNQTQPRPPQPGQGNHTHPRPP-HPDHGNQTQPHPPHPDQ 166

Query: 166 SRHRSWRWPQAEH 204
                 R P  +H
Sbjct: 167 GNQTQPRPPHPDH 179

 Score = 35.8 bits (81), Expect = 0.31
 Identities = 23/73 (31%), Positives = 29/73 (39%), Gaps = 6/73 (8%)
 Frame = +1

Query: 4   RQGHRHHGGLPQTRHDRPPG*GQQELRRRRGGGGG*TRPRPPRHP------QRQPPRPWP 165
           +  H  HG   Q R   P    Q +        G  T+PRPP HP      Q +PP+P  
Sbjct: 17  QSSHEDHGNQTQPRPPHPDQGNQTQPHPPHPDHGNQTQPRPP-HPDQGNQTQPRPPQPGQ 75

Query: 166 SRHRSWRWPQAEH 204
             H   R P  +H
Sbjct: 76  GNHTHPRPPHPDH 88

 Score = 32.7 bits (73), Expect = 2.7
 Identities = 20/54 (37%), Positives = 23/54 (42%)
 Frame = +1

Query: 4   RQGHRHHGGLPQTRHDRPPG*GQQELRRRRGGGGG*TRPRPPRHPQRQPPRPWP 165
           R  H   G   Q R   P    Q + R  R G G  T+PRPPR  Q    +P P
Sbjct: 251 RPPHPDQGNQTQPRPPHPDLGNQTQPRPPRPGQGNQTQPRPPRPGQGNQTQPRP 304

 Score = 31.6 bits (70), Expect = 5.9
 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
 Frame = +1

Query: 4   RQGHRHHGGLPQTRHDRPPG*GQQELRRRRGGGGG*TRPRPPRHP----QRQPPRPWPSR 171
           R  H  HG   Q R   P    Q + R      G  T+PRPP HP    Q QP  P P +
Sbjct: 199 RPPHPDHGNQTQPRPPHPDQGNQTQPRPPHPDQGNQTQPRPP-HPDQGNQTQPRPPHPDQ 257

 Score = 31.6 bits (70), Expect = 5.9
 Identities = 22/60 (36%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
 Frame = +1

Query: 4   RQGHRHHGGLPQTRHDRPPG*GQQELRRRRGGGGG*TRPRPPRHP----QRQPPRPWPSR 171
           R  H  HG   Q R   P    Q + R      G  T+PRPP HP    Q QP  P P +
Sbjct: 173 RPPHPDHGNQTQPRPPHPDQGNQTQPRPPHPDHGNQTQPRPP-HPDQGNQTQPRPPHPDQ 231



EST assemble image


clone accession position
1 CL58e05_r AV396213 1 507
2 CM054c07_r AV390023 268 537




Chlamydomonas reinhardtii
Kazusa DNA Research Institute