Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000727A_C01 KCC000727A_c01
(480 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00057775.1| COG1205: Distinct helicase family with a uniq... 47 1e-04
sp|P33485|VNUA_PRVKA PROBABLE NUCLEAR ANTIGEN gi|418708|pir||B45... 43 0.002
dbj|BAB84838.1| putative flower development regulator LEUNI prot... 42 0.003
dbj|BAC84075.1| hypothetical protein [Oryza sativa (japonica cul... 42 0.004
sp|Q60560|SMB2_MESAU DNA-BINDING PROTEIN SMUBP-2 (IMMUNOGLOBULIN... 42 0.005
>ref|ZP_00057775.1| COG1205: Distinct helicase family with a unique C-terminal domain
including a metal-binding cysteine cluster [Thermobifida
fusca]
Length = 1958
Score = 47.0 bits (110), Expect = 1e-04
Identities = 57/166 (34%), Positives = 64/166 (38%), Gaps = 13/166 (7%)
Frame = -3
Query: 472 LPSPC-GHRKCLAAGHGR--------RGPGAPAA----PPRCRRRTWHLPAR*PCERLAA 332
LP P G R+ AA H R RGPG PA PR RRR P R P R A
Sbjct: 73 LPGPRRGGRRRPAARHRRDRRPAVAGRGPGRPARLRRRGPRRRRRLCPRPRRTPRHRAAR 132
Query: 331 QRQFGGQLLRLRLHGTSQPHQQLRE*KRVDVHSGRTGRRPMPAPPRSRARRPKRASAGAA 152
R R R H PH+Q R GRR PA P R R +A A
Sbjct: 133 PRLRRTGPRRQRPH----PHRQ------------RPGRRT-PARPGHRGRGGPAVAAAAR 175
Query: 151 GRHVEVSRTVAPPEAAPSPPAARYLLPRLGCHAGARGKARSSSVRR 14
R AP P P AAR G A R + R+++ RR
Sbjct: 176 RGRPGHQRPAAPHPHRPRPAAARARRTAGGAGAQLRARRRATAGRR 221
>sp|P33485|VNUA_PRVKA PROBABLE NUCLEAR ANTIGEN gi|418708|pir||B45344 probable nuclear
antigen - suid herpesvirus 1 (strain Kaplan)
gi|334072|gb|AAA47471.1| ORF-3 protein
Length = 1733
Score = 43.1 bits (100), Expect = 0.002
Identities = 50/150 (33%), Positives = 54/150 (35%), Gaps = 21/150 (14%)
Frame = +3
Query: 93 GGLGAASGGATVLLTSTCRPAAPAEARFGRRARERGGAGIGRLPVLPECTSTRFHSRSCW 272
GGL V++T+ A GRR R GG G G P P C R CW
Sbjct: 1566 GGLVEQGLAVLVMVTTAVPSGGGGAAAAGRRDRPGGGGGWGSGP--PPC---RRCGHRCW 1620
Query: 273 -CGWLVPCKRRRR------------SCPPNCRWAARRSQGQRAGKCHVRRRHRGGAAGAP 413
C W + RRR P CR A R G R G C R GAAG P
Sbjct: 1621 LCWWRRGPRPRRRPGLTDRVPPRGGPSPRGCRGAGRAGGGGRGG-CGGGR--APGAAGGP 1677
Query: 414 G--------PRRP*PAAKHFL*PQGLGSGP 479
G RRP P A G G GP
Sbjct: 1678 GLCRCECCRGRRPGPGA-------GPGPGP 1700
>dbj|BAB84838.1| putative flower development regulator LEUNI protein [Oryza sativa
(japonica cultivar-group)] gi|20804798|dbj|BAB92482.1|
putative flower development regulator, LEUNI protein
[Oryza sativa (japonica cultivar-group)]
Length = 883
Score = 42.4 bits (98), Expect = 0.003
Identities = 33/114 (28%), Positives = 48/114 (41%), Gaps = 11/114 (9%)
Frame = +1
Query: 163 QKPASGAGPGNGAAPALVVFPSSLSARQRAFIHEVAGAAGLYHASEGEGAARQIVV-GLQ 339
+KP S +G N + A PS SA H A + + G+A+ +V+ G
Sbjct: 480 KKPGSSSGRANSSGTANTAGPSPSSAPSTPSTHTPGDAMSMPQLQQNGGSAKPLVMFGSD 539
Query: 340 GARKVSVPANATSDAD----------IVAALLEHLGLDARDRLPSTSYDRKGSG 471
GA ++ PANA +D D V + L +D RD L + KG G
Sbjct: 540 GAGSLTSPANALADVDRLLEDGSLDENVESFLSQDDMDPRDSLGRSMDASKGFG 593
>dbj|BAC84075.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
Length = 216
Score = 42.0 bits (97), Expect = 0.004
Identities = 47/155 (30%), Positives = 56/155 (35%), Gaps = 22/155 (14%)
Frame = -3
Query: 475 PLPSPCG-------HRKCLAAGHGRRGPGAPAAPPRCRRRTWHLPAR*PCERLAAQRQFG 317
P PSPC HR+ A R P P RCR + A P R A
Sbjct: 66 PSPSPCAPRRAARRHRRIAVAVALRPVPPLPRRCHRCRVTVAVVVALRPAPRRAPSPSLR 125
Query: 316 GQLLRLRLHGTSQPHQQLRE*KRVDVHSGRTGRRPMPAPPR-----------SRARRPKR 170
R + + +R V S R R P+ +PPR S R P R
Sbjct: 126 AARRHCRAARAAAASSPVPSPRRAPVPSPR--RAPVASPPRTPRPARRSPVASPPRAPHR 183
Query: 169 ASAGAAGR----HVEVSRTVAPPEAAPSPPAARYL 77
A ++ R H E R AP AAP PP AR L
Sbjct: 184 CRAASSSRRRRRHTEPRR--APRRAAPRPPLARAL 216
>sp|Q60560|SMB2_MESAU DNA-BINDING PROTEIN SMUBP-2 (IMMUNOGLOBULIN MU BINDING PROTEIN 2)
(SMUBP-2) (INSULIN II GENE ENHANCER-BINDING PROTEIN)
(RIPE3B-BINDING COMPLEX 3B2 P110 SUBUNIT) (RIP-1)
gi|11360343|pir||T48845 insulin II gene enhancer-binding
protein rip1 [validated] - golden hamster
gi|290919|gb|AAB00104.1| insulin II gene
enhancer-binding protein
Length = 989
Score = 41.6 bits (96), Expect = 0.005
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 220 FPSSLSARQRAFIHEVAGAAGLYHASEGEGAARQIVV 330
FP+SLS+ R +H++A GL H S GEG AR I V
Sbjct: 744 FPASLSSHDRLLVHQIAEEHGLRHDSTGEGKARHITV 780
