Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000716A_C01 KCC000716A_c01
(971 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|ZP_00008198.1| COG0351: Hydroxymethylpyrimidine/phosphomethy... 44 0.004
ref|ZP_00009817.1| COG2885: Outer membrane protein and related p... 41 0.035
ref|XP_329273.1| hypothetical protein [Neurospora crassa] gi|289... 40 0.060
ref|NP_795971.1| RIKEN cDNA 9430007L23 gene [Mus musculus] gi|26... 40 0.078
ref|XP_290756.1| similar to hypothetical protein [Homo sapiens] 39 0.13
>ref|ZP_00008198.1| COG0351: Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase
[Rhodobacter sphaeroides]
Length = 477
Score = 43.9 bits (102), Expect = 0.004
Identities = 54/176 (30%), Positives = 61/176 (33%), Gaps = 7/176 (3%)
Frame = +3
Query: 210 RGPDR*CEASRPHRGGCGL*AGGRRAVPSRTGQAT*GRS--PDRRVRG*PRDLLHGHGVP 383
R P R RP RGG GL GG R+G+ GRS PD R R PR L G G
Sbjct: 62 RRPRRAAHRERPDRGGAGLGGGGASCGAGRSGR---GRSAAPD-RARPSPRPLRRGAGAS 117
Query: 384 GAAFCGPRRLETWQLHPACAPVCATSSREGHVVEASGHVRHLPRCGLLPRSSSRSVTGRR 563
G A RRL C + GH +EA H R GR
Sbjct: 118 GGAAPRDRRL------------CGGGAGAGHGLEARPCASHRLRGACAAGGGGTRPGGR- 164
Query: 564 CRGVPAPAD**HAPRHQQHAPAPDAAQGGIHGGHVG-----GDGGWRSQACGTGAR 716
H + P + G HG +G G GG R G GAR
Sbjct: 165 -----------HRRAGRGGCPRGEGRGRGRHGHRLGHRRGRGSGGRRP---GAGAR 206
>ref|ZP_00009817.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Rhodopseudomonas palustris]
Length = 689
Score = 40.8 bits (94), Expect = 0.035
Identities = 43/158 (27%), Positives = 48/158 (30%)
Frame = -2
Query: 727 HRDDRAPVPHA*LLHPPSPPT*PPCIPPWAASGAGACC**RGACHQSAGAGTPRQRRPVT 548
H P PHA PP PP P PP AA A P PV
Sbjct: 125 HSAPPPPPPHA---APPPPPAPKPSAPPTAAPA-------------ERPAAPPPAAAPVR 168
Query: 547 EREDDRGSSPHRGRCRTCPLASTT*PSLLLVAQTGAQAGCSCHVSSLRGPQNAAPGTP*P 368
G +P R + P RGP APGTP P
Sbjct: 169 PPAPPAGEAPQRRGPPPGAVPPNAVPPNAAAPDAAKPDAAKQPPGERRGPPPGAPGTP-P 227
Query: 367 CSRSRGHPRTRRSGERPHVACPVLEGTARRPPAHSPQP 254
+ + G T GE P P A PPA +P P
Sbjct: 228 NATAPG--MTPPPGEAPRRGPPPPPAAANPPPAAAPTP 263
>ref|XP_329273.1| hypothetical protein [Neurospora crassa] gi|28926398|gb|EAA35374.1|
hypothetical protein [Neurospora crassa]
Length = 2558
Score = 40.0 bits (92), Expect = 0.060
Identities = 34/110 (30%), Positives = 54/110 (48%)
Frame = +2
Query: 506 PASVWTAASIVLAFCHRAPLPRSSRTS*LMTRASSSTARPCPRCSPRRDTRGSCGWRRWM 685
P S+ T S+ +PR+ RTS T AS ++A + S RD+ S G R +
Sbjct: 229 PPSLGTLPSLKTGNSSAQTIPRTGRTS-QSTAASPTSAPFMGKASLERDS--SRGPARHL 285
Query: 686 EESSVWDGSAVVTVVTGVDGTSSAQLLIMPSYDSAYEVKIKKHM*RAVSL 835
+E S W GS+ ++ DG++S + + PS D+ + M AVS+
Sbjct: 286 DEPSSW-GSSRRSISRHGDGSTSPSIAVRPSVDTTTAALARSRMEDAVSI 334
>ref|NP_795971.1| RIKEN cDNA 9430007L23 gene [Mus musculus]
gi|26352820|dbj|BAC40040.1| unnamed protein product [Mus
musculus]
Length = 178
Score = 39.7 bits (91), Expect = 0.078
Identities = 31/95 (32%), Positives = 39/95 (40%), Gaps = 1/95 (1%)
Frame = -2
Query: 925 PAAVPEDVAAALATLSRKRGRGRPSAADSQQRNRALHMLLNFDFVGAVVAGHDEQLGAGG 746
P P V+ + A LSR RGRP+A ++ A A+ A ++ G
Sbjct: 77 PGPPPSLVSFSPALLSRPSERGRPAAPTGNAQHYA-----------AIPARRSNEVRLGS 125
Query: 745 AINSRYHRD-DRAPVPHA*LLHPPSPPT*PPCIPP 644
S H D RA P LL PP PPC PP
Sbjct: 126 QTRSGLHHDLRRAAFPRRRLLRPP-----PPCFPP 155
>ref|XP_290756.1| similar to hypothetical protein [Homo sapiens]
Length = 193
Score = 38.9 bits (89), Expect = 0.13
Identities = 28/75 (37%), Positives = 30/75 (39%)
Frame = -2
Query: 421 HVSSLRGPQNAAPGTP*PCSRSRGHPRTRRSGERPHVACPVLEGTARRPPAHSPQPPRCG 242
H RGP+NAA P P RSR H R C G RPP H QPP G
Sbjct: 48 HWGPQRGPRNAAAARPGP--RSRWHKR-----------CAAACGACARPPGHQLQPPGAG 94
Query: 241 REASH*RSGPRQGVA 197
P+ GVA
Sbjct: 95 --------APQPGVA 101
