Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000712A_C01 KCC000712A_c01
(521 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T18535 high molecular mass nuclear antigen - chicken (fragm... 44 0.001
ref|NP_355591.1| AGR_C_4814p [Agrobacterium tumefaciens] gi|2552... 44 0.001
ref|XP_287554.1| hypothetical protein XP_287554 [Mus musculus] 44 0.002
ref|NP_497478.1| prion-like Q/N-rich domain protein PQN-41, Prio... 43 0.002
dbj|BAC92389.1| hypothetical protein [Oryza sativa (japonica cul... 36 0.004
>pir||T18535 high molecular mass nuclear antigen - chicken (fragment)
gi|2754696|dbj|BAA24137.1| high molecular mass nuclear
antigen [Gallus gallus]
Length = 1151
Score = 43.9 bits (102), Expect = 0.001
Identities = 33/98 (33%), Positives = 49/98 (49%), Gaps = 1/98 (1%)
Frame = +3
Query: 153 VTGVRPSPCLRPLRGAVTVRVASVAPPPRPFDASSLPEGRAGSTYR-RASPDATPPAAEA 329
VT V P+P + V +P D + L G +T +ASP AT EA
Sbjct: 968 VTAVSPAP----------IGVTEASPSA---DGARLSPGPTAATDGPKASPAATADVTEA 1014
Query: 330 VADVTAQHDATSSDAAATLERKASGRKATTSASSSASS 443
DVTA A ++AA T +++S +++S+SSS+SS
Sbjct: 1015 ATDVTAAATAVPAEAAPTKAKRSSSSSSSSSSSSSSSS 1052
Score = 35.4 bits (80), Expect = 0.45
Identities = 40/135 (29%), Positives = 52/135 (37%), Gaps = 35/135 (25%)
Frame = +3
Query: 159 GVRPSPCLRPLRGAVTVRVASV----------APPPRPFDASSLPEGRAGSTYRRASPDA 308
G P+P +P GA AS +PP P S E AG+ P
Sbjct: 63 GTEPTPPSKPTDGADAAPKASAELTSPPPASPSPPDGPKAPSGAGEAEAGTPPPSQGPAG 122
Query: 309 TPPAAEAVA-----DVTAQHDATSSDA--------------AATLERKASGR-----KAT 416
TPP ++ A D TAQ T S A AAT R AS KAT
Sbjct: 123 TPPPSQGAAGAPKGDGTAQPSGTKSGADGKPAAQDVPKATTAATEARPASAASPTVPKAT 182
Query: 417 TSASS-SASSRDRPQ 458
A++ +A+S+ P+
Sbjct: 183 AEATAVTAASQSAPK 197
>ref|NP_355591.1| AGR_C_4814p [Agrobacterium tumefaciens] gi|25521102|pir||G97677
hypothetical protein AGR_C_4814 [imported] -
Agrobacterium tumefaciens (strain C58, Cereon)
gi|15157863|gb|AAK88376.1| AGR_C_4814p [Agrobacterium
tumefaciens str. C58 (Cereon)]
Length = 456
Score = 43.9 bits (102), Expect = 0.001
Identities = 28/72 (38%), Positives = 38/72 (51%)
Frame = +3
Query: 264 EGRAGSTYRRASPDATPPAAEAVADVTAQHDATSSDAAATLERKASGRKATTSASSSASS 443
E A SP A PP A+A TA + A++S AAA + A G A+TSAS SA++
Sbjct: 71 ESPADKPKEPVSPAAVPPKADAKPATTA-YGASASSAAAAASKPAFGSTASTSASGSAAA 129
Query: 444 RDRPQRGFISAG 479
+P S+G
Sbjct: 130 AAKPSPATASSG 141
>ref|XP_287554.1| hypothetical protein XP_287554 [Mus musculus]
Length = 122
Score = 43.5 bits (101), Expect = 0.002
Identities = 32/85 (37%), Positives = 41/85 (47%), Gaps = 9/85 (10%)
Frame = +1
Query: 286 TAGRRPTPPRQRRRLLLT*R-------RSMTPPAVTPPRRWSARQAAVKPRPAPVPAPAA 444
T R P P+ RR L L R R++ PPA PP W + +A +PRPA PAPA
Sbjct: 25 TVPRHPRRPQPRRGLCLPLRPPTKLGARTVGPPAPAPPSPWPSTGSA-RPRPAHSPAPAP 83
Query: 445 VTARSAVSSVLA--TSGNRAATGRR 513
A + ++L T G R G R
Sbjct: 84 GWAHRRLPALLRVHTRGTRQKKGPR 108
>ref|NP_497478.1| prion-like Q/N-rich domain protein PQN-41, Prion-like Q/N-rich
domain protein (pqn-41) [Caenorhabditis elegans]
gi|14916299|gb|AAF02169.3|
Prion-like-(q/n-rich)-domain-bearing protein protein 41
[Caenorhabditis elegans]
Length = 545
Score = 43.1 bits (100), Expect = 0.002
Identities = 35/115 (30%), Positives = 51/115 (43%), Gaps = 8/115 (6%)
Frame = +1
Query: 148 PR*RASGHRRASDRSAALSQSA*PAS--HLRLDHLTHHRCQRAVLAA---LTAGRRPTPP 312
P RA A+ SAA S ++ P+S H + HH+ A A +T+ P PP
Sbjct: 38 PAPRAGAGAGATSSSAASSSTSTPSSSSHHKKSSPPHHQKSAAPSAPPRDVTSAHAPPPP 97
Query: 313 RQRRRLLLT*RRSMTP---PAVTPPRRWSARQAAVKPRPAPVPAPAAVTARSAVS 468
++ R+ TP PA TP +Q+ P+P V P+A T + VS
Sbjct: 98 ASSAPIVGAPRQGATPQAAPATTPATTSQHQQSIATPKPPVVRPPSAATQQQPVS 152
>dbj|BAC92389.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
gi|35215204|dbj|BAC92556.1| hypothetical protein [Oryza
sativa (japonica cultivar-group)]
Length = 312
Score = 35.8 bits (81), Expect(2) = 0.004
Identities = 21/51 (41%), Positives = 23/51 (44%)
Frame = +1
Query: 304 TPPRQRRRLLLT*RRSMTPPAVTPPRRWSARQAAVKPRPAPVPAPAAVTAR 456
TPP +RRR L RR + PP T SAR P P P TAR
Sbjct: 181 TPPNRRRRCLPEERRRLFPPPATSRSASSARTLGEPLLPLPFPFACIATAR 231
Score = 25.8 bits (55), Expect(2) = 0.004
Identities = 15/49 (30%), Positives = 19/49 (38%)
Frame = +3
Query: 171 SPCLRPLRGAVTVRVASVAPPPRPFDASSLPEGRAGSTYRRASPDATPP 317
SPCL ++V V+ P P SS P + P TPP
Sbjct: 135 SPCLPVSSVVISVGVSRRTATPYPLLTSSFPSLGPSDHWPPVPPHGTPP 183
