KCC000707A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000707A_C01 KCC000707A_c01
CAAGTCTCAGTATTAGAACGTGATACTCAAGCACACTACTCGCGCACACCATCTTGCTTC
CTCGAACAGTCTTTCCAGGAAAACAACCTTGGCACAGAGTCGCCACGAGTTAAGGCGTAT
CAACCATGGGTTGCGGAGCGAGCGTCATGAACCGGCGATGGCGGCGATGGCAACACAGCC
AGCTGCGCCCCAGCCCAAGAAGGAGGCTGCTGAGGGAGAGTCCTTCGGCTCGGACCTGAA
GAGCTTCCTCATTAAGATTATCAAGGAGCCTGAGTACGCCAAGTCGCTGCCTGACCACCT
GGCGGCCACTGAGGACCCCACCAACCAGGTTGAGAAAATGCTCAAGATGCTTATGAGCAT
TGTGGACATGGTCAAGGATACCACCACTCCCAAGCACGATATTCCCGAGTTCCTGGTTGG
CTGCCTGGTCGCGTTCCTGTACCACCTGACCATGAAGCCGGCCGCACCTGAGAAGCAGGT
GGAGCTGCAGTCTCTGCAGGACACCGGCTACCACGTGGACGCCAAGTGGGCTGATGCCGT
GTACGACAAGGAGGAGGTGGAGGACCCCAAGGCCGCGCTGGTGGTGTCCATGGCTGCCGA
GCCCACGCCCAAGACCCTCAAGGTTGAGGACGTGGCCTACTTCCGCGCCGCCTCCAAGTT
GGGCCAGCCTGCCGTAGCCGTGGTGGCGGACCGTGAGCGCGAGCTCATCCTGGTCATTGT
GCGCGGCACTGCCAACATGAAGGACGTGCTGACGGACCTGGCCGGCGCGGCGCGCGAGTG
GGAGGGCGGCTACGCGCACGAGTCCGTGAGCTTGGGCGCCCGCAAGGTGTTTGACGAGAT
CAAGGAGTACGTGCTGAACCTCAAGGCCCAGAACCCCAGCTTCGCCGTCCGCTGCGTGGG
CCACTCGCTGGGCGGCGGCACCGCCGGCTGCCTGTCGATCCTGATGCACCACGACGAGGA
GTTTGCGGCGCGCATCTACGGCGGCGTGCCCATGCCGGGCAAGAAGAGCAAGGGCAGCTA
CATGATCACAGCTGTGGGCTTTGGCTCGGCCGCCTGCATCAACAAGGAGCTGGTGGAGGA
GGCGCACCCCTACTGCACCACCATTGGTCACGACGCCGACCTGGTGCCCCGnctgtgcac
gac


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000707A_C01 KCC000707A_c01
         (1143 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

gb|AAL32568.1| Unknown protein [Arabidopsis thaliana] gi|2025985...    87  5e-16
ref|NP_567482.2| lipase (class 3) family [Arabidopsis thaliana]        87  5e-16
dbj|BAB92817.1| P0551A11.9 [Oryza sativa (japonica cultivar-grou...    82  2e-14
ref|NP_181773.1| lipase (class 3) family [Arabidopsis thaliana] ...    79  2e-13
ref|NP_566475.1| lipase (class 3) family [Arabidopsis thaliana] ...    72  2e-11

>gb|AAL32568.1| Unknown protein [Arabidopsis thaliana] gi|20259858|gb|AAM13276.1|
            unknown protein [Arabidopsis thaliana]
          Length = 654

 Score = 87.0 bits (214), Expect = 5e-16
 Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
 Frame = +2

Query: 626  EDVAYFRAASKLGQPAVAVVADRERELILVIVRGTANMKDVLTDLAGAAREWEG------ 787
            EDV   +  + + QPA  ++ D   + IL+++RGT ++KD LT   GA   +        
Sbjct: 153  EDVLLQKPKAGIMQPAFTIIRDTNSKCILLLIRGTHSIKDTLTAATGAVVPFHHSVLHDG 212

Query: 788  -------GYAHESVSLGARKVFDEIKEYVLNLKAQNPSFAVRCVGHSLGGGTAGCLSILM 946
                   GYAH  +   AR +       +L    +NPSF V+ VGHSLGGGTA  L+ ++
Sbjct: 213  GLSNLVLGYAHCGMVAAARWIAKLSVPCLLKALDENPSFKVQIVGHSLGGGTASLLTYIL 272

Query: 947  HHDEEFAARIYGGVPMPGKKSKGSYMITAVGFGSAACINKELVEEAHPYCTTIGHDADLV 1126
               +EFA+                   T   F  AAC+  +L E    + TTI + +DLV
Sbjct: 273  REQKEFAS------------------ATCFTFAPAACMTWDLAESGKHFITTIINGSDLV 314

Query: 1127 P 1129
            P
Sbjct: 315  P 315

>ref|NP_567482.2| lipase (class 3) family [Arabidopsis thaliana]
          Length = 654

 Score = 87.0 bits (214), Expect = 5e-16
 Identities = 58/181 (32%), Positives = 85/181 (46%), Gaps = 13/181 (7%)
 Frame = +2

Query: 626  EDVAYFRAASKLGQPAVAVVADRERELILVIVRGTANMKDVLTDLAGAAREWEG------ 787
            EDV   +  + + QPA  ++ D   + IL+++RGT ++KD LT   GA   +        
Sbjct: 153  EDVLLQKPKAGIMQPAFTIIRDTNSKCILLLIRGTHSIKDTLTAATGAVVPFHHSVLHDG 212

Query: 788  -------GYAHESVSLGARKVFDEIKEYVLNLKAQNPSFAVRCVGHSLGGGTAGCLSILM 946
                   GYAH  +   AR +       +L    +NPSF V+ VGHSLGGGTA  L+ ++
Sbjct: 213  GLSNLVLGYAHCGMVAAARWIAKLSVPCLLKALDENPSFKVQIVGHSLGGGTASLLTYIL 272

Query: 947  HHDEEFAARIYGGVPMPGKKSKGSYMITAVGFGSAACINKELVEEAHPYCTTIGHDADLV 1126
               +EFA+                   T   F  AAC+  +L E    + TTI + +DLV
Sbjct: 273  REQKEFAS------------------ATCFTFAPAACMTWDLAESGKHFITTIINGSDLV 314

Query: 1127 P 1129
            P
Sbjct: 315  P 315

>dbj|BAB92817.1| P0551A11.9 [Oryza sativa (japonica cultivar-group)]
            gi|21328111|dbj|BAC00692.1| OJ1116_C07.9 [Oryza sativa
            (japonica cultivar-group)]
          Length = 635

 Score = 82.0 bits (201), Expect = 2e-14
 Identities = 58/185 (31%), Positives = 85/185 (45%), Gaps = 13/185 (7%)
 Frame = +2

Query: 626  EDVAYFRAASKLGQPAVAVVADRERELILVIVRGTANMKDVLTDLAGAAREW------EG 787
            EDV      + + +PA  ++ D   +  LV++RGT +MKD LT   GA   +      EG
Sbjct: 152  EDVLIEEPKAGILKPAHTILRDECTKSFLVLIRGTHSMKDTLTAATGAVVPFHHSLLDEG 211

Query: 788  G-------YAHESVSLGARKVFDEIKEYVLNLKAQNPSFAVRCVGHSLGGGTAGCLSILM 946
            G       YAH  +   AR +   I   +    +Q P + +R VGHSLGGGTA  L+ ++
Sbjct: 212  GVSKLVLGYAHCGMVAAARWIARSITPCLCQAVSQCPDYQIRVVGHSLGGGTAALLTYIL 271

Query: 947  HHDEEFAARIYGGVPMPGKKSKGSYMITAVGFGSAACINKELVEEAHPYCTTIGHDADLV 1126
               +E ++                   T V F  A+C+  EL E    +  TI + ADLV
Sbjct: 272  REHQELSS------------------TTCVAFAPASCMTWELAESGKHFVRTIVNGADLV 313

Query: 1127 PRLCT 1141
            P + T
Sbjct: 314  PTVST 318

>ref|NP_181773.1| lipase (class 3) family [Arabidopsis thaliana]
            gi|25408795|pir||A84854 hypothetical protein At2g42450
            [imported] - Arabidopsis thaliana
            gi|4567316|gb|AAD23727.1| hypothetical protein
            [Arabidopsis thaliana]
          Length = 508

 Score = 78.6 bits (192), Expect = 2e-13
 Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 4/247 (1%)
 Frame = +2

Query: 407  EFLVGCLVAFLYHLTMKPAAPEKQVELQSLQDTGYHVDAKWADAVYDKEEVEDPKAALVV 586
            +  +G  + +L   ++ P    K VE+ S + T Y       D +Y+ E  +      V 
Sbjct: 115  DLTIGLYLIYLRQASLSPFEDVKGVEVVS-ESTVY-------DLIYNAELAKGCYRDSVS 166

Query: 587  SMAAEPTPKTLKVEDVAYFRAASKLGQPAVAVVADRERELILVIVRGTANMKDVLTDLAG 766
             +A       L+  ++  F   S + +P   +  D  R+L++  +RGT  + D++TD+  
Sbjct: 167  GLAKNTM---LRENNILKFVKDSSVMRPGYYIGVDHRRKLVVFGIRGTHTIYDLITDIVS 223

Query: 767  AARE---WEGGYAHESVSLGARKVFDEIKEYVLNLKAQNPSFAVRCVGHSLGGGTAGCLS 937
            ++ E   +EG   H   +  AR   +   + +    A+   + +R VGHSLGG  A  ++
Sbjct: 224  SSDEEVTFEGYSTHFGTAEAARWFLNHELQTIRRCLAKYEGYKLRLVGHSLGGAIASLMA 283

Query: 938  ILMHHDEEFAARIYGGVPMPGKK-SKGSYMITAVGFGSAACINKELVEEAHPYCTTIGHD 1114
            I++               MP ++    + +I+AVG+ +  C++KEL E    + TTI   
Sbjct: 284  IMLKK-------------MPREELGFDAEIISAVGYATPPCVSKELAENCSEFVTTIVMQ 330

Query: 1115 ADLVPRL 1135
             D++PRL
Sbjct: 331  DDIIPRL 337

>ref|NP_566475.1| lipase (class 3) family [Arabidopsis thaliana]
            gi|15146181|gb|AAK83574.1| AT3g14070/MAG2_2 [Arabidopsis
            thaliana] gi|27764916|gb|AAO23579.1| At3g14070/MAG2_2
            [Arabidopsis thaliana]
          Length = 642

 Score = 72.0 bits (175), Expect = 2e-11
 Identities = 51/181 (28%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
 Frame = +2

Query: 626  EDVAYFRAASKLGQPAVAVVADRERELILVIVRGTANMKDVLTDLAGAAREWEG------ 787
            E+V      + + +PA  V+ D   +  L+++RGT ++KD LT   GA   +        
Sbjct: 155  ENVLIHEPKAGILKPAFTVLVDHNTKYFLLLIRGTHSIKDTLTAATGAIVPFHHTVVNER 214

Query: 788  -------GYAHESVSLGARKVFDEIKEYVLNLKAQNPSFAVRCVGHSLGGGTAGCLSILM 946
                   GYAH  +   AR +       +L    Q P + ++ VGHSLGGGTA  L+ +M
Sbjct: 215  GVSNLVLGYAHCGMVAAARCIAKLATPCLLKGLEQYPDYKIKIVGHSLGGGTAALLTYIM 274

Query: 947  HHDEEFAARIYGGVPMPGKKSKGSYMITAVGFGSAACINKELVEEAHPYCTTIGHDADLV 1126
                              ++ K     T V F  AAC+  EL +  + +  ++ + ADLV
Sbjct: 275  ------------------REQKMLSTATCVTFAPAACMTWELADSGNDFIVSVINGADLV 316

Query: 1127 P 1129
            P
Sbjct: 317  P 317



EST assemble image


clone accession position
1 MX222d03_r BP090333 1 309
2 MXL044e09_r BP095609 34 588
3 MX213e12_r BP089766 97 411
4 CL56f08_r AV396115 112 658
5 MX220d02_r BP090198 195 506
6 MXL054g07_r BP096217 202 597
7 LCL032e01_r AV627817 337 600
8 MX253e08_r BP092388 510 944
9 CM027e04_r AV387615 510 1129
10 MX242e10_r BP091679 510 1027
11 CM083e05_r AV392165 700 1258
12 CM096g04_r AV392783 762 1164
13 CM083e06_r AV392190 839 1196
14 CM083e08_r AV392203 844 1157




Chlamydomonas reinhardtii
Kazusa DNA Research Institute