KCC000706A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000706A_C01 KCC000706A_c01
gTCCTCCGCTTGCATACCCTGAAGCGACTGAACCGGCACGGCTTGTCATCGACATTTGCT
GACCGTTGATAGTGCTCCTGACGACGTGGTCAAAGCCTTTAAGCGTAGGTGCTGAATTCA
AGCAAAACCAAGTGTAGCGCTTTGCCGGATTACGCTGGAAGTCACCCCCCGGTAGAATGG
CACTTGCGTCGTCGCTGTTGCGCACGCGACCTACGCATGGGGCAATCCCGAACGCTGCGG
CCGCGGCGCTGTCGCTGCGGCCAGCAATCTGTAGCGGCTCGACATCATGCCTGCAAAACG
TCCTGCTGCGCCGCGCGCTGGCGGGGCAACGGCTCGGCGTGACTGCTGCAGCGGGTCCTT
CGGGGCCATCGCCGTCGAGCACCGTGGTCGTTGCGTCGGAGCTGGATGTCGGGTACAGCA
GCGCTCAGGGCGCCCGTGACACGATGGAGGACGAGGTGCAGGTGCACTACAACACCGTGG
GCCACTACCTGTACGCGGCGGTCTTTGACGGCCACGGCGGAGACATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000706A_C01 KCC000706A_c01
         (527 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_849459.1| Protein phosphatase 2C PPH1  (PPH1) (PP2C) [Ara...    48  7e-05
ref|NP_194509.1| Protein phosphatase 2C PPH1  (PPH1) (PP2C) [Ara...    48  7e-05
ref|NP_849460.1| Protein phosphatase 2C PPH1  (PPH1) (PP2C) [Ara...    48  7e-05
pir||T09019 phosphoprotein phosphatase homolog T27E11.40 - Arabi...    48  7e-05
dbj|BAC57377.1| hypothetical protein [Oryza sativa (japonica cul...    45  8e-04

>ref|NP_849459.1| Protein phosphatase 2C PPH1  (PPH1) (PP2C) [Arabidopsis thaliana]
          Length = 335

 Score = 48.1 bits (113), Expect = 7e-05
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = +3

Query: 369 SPSSTVVVASELDVGYSSAQGARDTMEDEVQVHYNTVGHYLYAAVFDGHGG 521
           +PSS   V + +  GY+S QG RD MED++ +  + V  + YAAVFDGH G
Sbjct: 48  APSSLTGV-TPIRWGYTSVQGFRDEMEDDIVIRSDAVDSFSYAAVFDGHAG 97

>ref|NP_194509.1| Protein phosphatase 2C PPH1  (PPH1) (PP2C) [Arabidopsis thaliana]
           gi|12643420|sp|P49599|P2C3_ARATH Protein phosphatase 2C
           PPH1 (PP2C) gi|25407601|pir||C85323 protein phosphatase
           homolog (PPH1) [imported] - Arabidopsis thaliana
           gi|7269633|emb|CAB81429.1| protein phosphatase homolog
           (PPH1) [Arabidopsis thaliana] gi|19423901|gb|AAL87346.1|
           putative protein phosphatase homolog PPH1 [Arabidopsis
           thaliana] gi|21281245|gb|AAM45108.1| putative protein
           phosphatase homolog PPH1 [Arabidopsis thaliana]
          Length = 388

 Score = 48.1 bits (113), Expect = 7e-05
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = +3

Query: 369 SPSSTVVVASELDVGYSSAQGARDTMEDEVQVHYNTVGHYLYAAVFDGHGG 521
           +PSS   V + +  GY+S QG RD MED++ +  + V  + YAAVFDGH G
Sbjct: 48  APSSLTGV-TPIRWGYTSVQGFRDEMEDDIVIRSDAVDSFSYAAVFDGHAG 97

>ref|NP_849460.1| Protein phosphatase 2C PPH1  (PPH1) (PP2C) [Arabidopsis thaliana]
          Length = 326

 Score = 48.1 bits (113), Expect = 7e-05
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = +3

Query: 369 SPSSTVVVASELDVGYSSAQGARDTMEDEVQVHYNTVGHYLYAAVFDGHGG 521
           +PSS   V + +  GY+S QG RD MED++ +  + V  + YAAVFDGH G
Sbjct: 48  APSSLTGV-TPIRWGYTSVQGFRDEMEDDIVIRSDAVDSFSYAAVFDGHAG 97

>pir||T09019 phosphoprotein phosphatase homolog T27E11.40 - Arabidopsis thaliana
           gi|4972111|emb|CAB43968.1| protein phosphatase homolog
           (PPH1) [Arabidopsis thaliana]
          Length = 386

 Score = 48.1 bits (113), Expect = 7e-05
 Identities = 24/51 (47%), Positives = 33/51 (64%)
 Frame = +3

Query: 369 SPSSTVVVASELDVGYSSAQGARDTMEDEVQVHYNTVGHYLYAAVFDGHGG 521
           +PSS   V + +  GY+S QG RD MED++ +  + V  + YAAVFDGH G
Sbjct: 48  APSSLTGV-TPIRWGYTSVQGFRDEMEDDIVIRSDAVDSFSYAAVFDGHAG 97

>dbj|BAC57377.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]
          Length = 298

 Score = 44.7 bits (104), Expect = 8e-04
 Identities = 41/113 (36%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
 Frame = -3

Query: 522 LRRGRQRPPRTGSGPRCCSAPAPRPPSCHGRPERCCTRHPAPTQRPRC-STAMAPKDPLQ 346
           LRR R RPPR G+  R   AP P P S        C   PA +   RC   +  P+ PL 
Sbjct: 183 LRRRRYRPPRAGTAGRPLRAPPPLPLSTSR-----CRHGPALSASLRCRRPSRPPRSPLV 237

Query: 345 QSRRAVAPPARGAAGRFAGMMSSRYRLLAAATAP------RPQRSGLPHA*VA 205
            + R  APP R        + SS  R L+AA  P      RP RS  P   +A
Sbjct: 238 DAGR--APPCRRPP---PPLRSSSKRTLSAAAVPSDELLHRPVRSPPPQEQIA 285



EST assemble image


clone accession position
1 HCL001g07_r AV639605 1 301
2 CL56d08_r AV396111 2 527




Chlamydomonas reinhardtii
Kazusa DNA Research Institute