Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000704A_C01 KCC000704A_c01
(522 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAC43533.1| putative transcriptional regulatory protein [Ara... 115 3e-25
ref|NP_186781.2| expressed protein [Arabidopsis thaliana] 107 7e-23
gb|AAF03494.1|AC010676_4 unknown protein [Arabidopsis thaliana] 104 6e-22
ref|NP_173829.1| expressed protein [Arabidopsis thaliana] gi|748... 97 1e-19
pir||I61713 co-repressor protein - mouse gi|642619|gb|AAA69773.1... 81 7e-15
>dbj|BAC43533.1| putative transcriptional regulatory protein [Arabidopsis thaliana]
Length = 543
Score = 115 bits (289), Expect = 3e-25
Identities = 63/176 (35%), Positives = 99/176 (55%), Gaps = 21/176 (11%)
Frame = +1
Query: 58 YFERAKQRLRNKDAYNDMLKCLSMYTQEIISRQELLQLLNDIIGRFPDLMSGFHEFMAKC 237
+ E+ K+RL ++D Y LKCL+M++ II R++L L++D++G+FPDLM F++F +C
Sbjct: 337 FCEKVKERLCSQDDYQAFLKCLNMFSNGIIQRKDLQNLVSDVLGKFPDLMDEFNQFFERC 396
Query: 238 DLME---------------IDENKVRGLAAQNLQRQRQR------EEELQRQKYLTKPLS 354
+ ++ +EN R + + R+ +R E+E + KY+ K +
Sbjct: 397 ESIDGFQHLAGVMSKKSLGSEENLSRSVKGEEKDREHKRDVEAAKEKERSKDKYMGKSIQ 456
Query: 355 EIVSGDTERVTPSYVKMPPGYPHLVSTGRTPLADSVLNSEFVNVITGSEDYSFKLM 522
E+ D ER TPSY +PP YP R +VLN +V+V +GSEDYSFK M
Sbjct: 457 ELDLSDCERCTPSYRLLPPDYPIPSVRHRQKSGAAVLNDHWVSVTSGSEDYSFKHM 512
>ref|NP_186781.2| expressed protein [Arabidopsis thaliana]
Length = 1039
Score = 107 bits (268), Expect = 7e-23
Identities = 57/177 (32%), Positives = 102/177 (57%), Gaps = 22/177 (12%)
Frame = +1
Query: 58 YFERAKQRLRNKDAYNDMLKCLSMYTQEIISRQELLQLLNDIIGRFPDLMSGFHEFMAKC 237
+ E+ K RL ++D Y LKCL++++ II R++L L++D++G+FPDLM F++F +C
Sbjct: 8 FCEKVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQFFERC 67
Query: 238 DLMEIDENKVRGLAAQNL--------------QRQRQREEELQ--------RQKYLTKPL 351
+ + ++ G+ ++ L +++ + + EL+ +++Y+ K +
Sbjct: 68 ESITDGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPELEAVKETEQCKKEYMGKSI 127
Query: 352 SEIVSGDTERVTPSYVKMPPGYPHLVSTGRTPLADSVLNSEFVNVITGSEDYSFKLM 522
E+ D E TPSY +P YP +++ R+ L VLN +V+V +GSEDYSFK M
Sbjct: 128 QELDLSDCECCTPSYRLLPADYPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKHM 184
>gb|AAF03494.1|AC010676_4 unknown protein [Arabidopsis thaliana]
Length = 1324
Score = 104 bits (260), Expect = 6e-22
Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 26/181 (14%)
Frame = +1
Query: 58 YFERAKQRLRNKDAYNDMLKCLSMYTQEIISRQELLQLLNDIIGRFPDLMSGFHEFMAKC 237
+ E+ K RL ++D Y LKCL++++ II R++L L++D++G+FPDLM F++F +C
Sbjct: 341 FCEKVKDRLCSQDDYQTFLKCLNIFSNGIIQRKDLQNLVSDLLGKFPDLMDEFNQFFERC 400
Query: 238 D--------------------LMEIDENKVRGLAAQNLQRQRQ------REEELQRQKYL 339
+ L +E R + + + + + +E E +++Y+
Sbjct: 401 ESITGTEIHGFQRLAGVMSKKLFSSEEQLSRPMKVEEKESEHKPELEAVKETEQCKKEYM 460
Query: 340 TKPLSEIVSGDTERVTPSYVKMPPGYPHLVSTGRTPLADSVLNSEFVNVITGSEDYSFKL 519
K + E+ D E TPSY +P YP +++ R+ L VLN +V+V +GSEDYSFK
Sbjct: 461 GKSIQELDLSDCECCTPSYRLLPADYPIPIASQRSELGAEVLNDHWVSVTSGSEDYSFKH 520
Query: 520 M 522
M
Sbjct: 521 M 521
>ref|NP_173829.1| expressed protein [Arabidopsis thaliana] gi|7486361|pir||T00649
hypothetical protein F3I6.12 - Arabidopsis thaliana
gi|2829870|gb|AAC00578.1| Hypothetical protein
[Arabidopsis thaliana]
Length = 1263
Score = 97.1 bits (240), Expect = 1e-19
Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 39/199 (19%)
Frame = +1
Query: 43 AKELSYFERAKQRLRNKDAYNDMLKCLSMYTQEIISRQELLQLLNDIIGRFPDLMSGFHE 222
+++L+ +R K++L N Y + L+CL+++++EIISR EL L+ ++IG +PDLM F E
Sbjct: 288 SQDLAIVDRVKEKL-NASEYQEFLRCLNLFSKEIISRPELQSLVGNLIGVYPDLMDSFIE 346
Query: 223 FMAKCDLME---------------------------------------IDENKVRGLAAQ 285
F+ +C+ E D+ R +
Sbjct: 347 FLVQCEKNEKRQICNLLNLLAEGLLSGILTKKSLWSEGKYPQPSLDNDRDQEHKRDDGLR 406
Query: 286 NLQRQRQREEELQRQKYLTKPLSEIVSGDTERVTPSYVKMPPGYPHLVSTGRTPLADSVL 465
+ +++R E+ KP+SE+ + E+ TPSY +P YP +++ +T + VL
Sbjct: 407 DRDHEKERLEKAAANLKWAKPISELDLSNCEQCTPSYRLLPKNYPISIASQKTEIGKLVL 466
Query: 466 NSEFVNVITGSEDYSFKLM 522
N +V+V +GSEDYSF M
Sbjct: 467 NDHWVSVTSGSEDYSFSHM 485
>pir||I61713 co-repressor protein - mouse gi|642619|gb|AAA69773.1| mSin3A gene
product
Length = 1219
Score = 81.3 bits (199), Expect = 7e-15
Identities = 46/155 (29%), Positives = 79/155 (50%)
Frame = +1
Query: 49 ELSYFERAKQRLRNKDAYNDMLKCLSMYTQEIISRQELLQLLNDIIGRFPDLMSGFHEFM 228
E +F++ ++ LR+ +AY + L+CL ++ QE+ISR EL+QL++ +G+FP+L + F F+
Sbjct: 464 ESLFFDKVRKALRSAEAYENFLRCLVIFNQEVISRAELVQLVSPFLGKFPELFNWFKNFL 523
Query: 229 AKCDLMEIDENKVRGLAAQNLQRQRQREEELQRQKYLTKPLSEIVSGDTERVTPSYVKMP 408
+ + + E +++ EI +R+ SY +P
Sbjct: 524 GYKESVHL--------------------ESFPKERATEGIAMEIDYASCKRLGSSYRALP 563
Query: 409 PGYPHLVSTGRTPLADSVLNSEFVNVITGSEDYSF 513
Y TGRTPL VLN +V+ + SED +F
Sbjct: 564 KSYQQPKCTGRTPLCKEVLNDTWVSFPSWSEDSTF 598
Score = 33.5 bits (75), Expect = 1.7
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 31 RPQLAKELSYFERAKQRLRNK-DAYNDMLKCLSMYTQEIISRQELLQLLNDIIGRFPDLM 207
R ++ LSY ++ K + ++ YND L + + + I ++ ++ + PDL+
Sbjct: 120 RLKVEDALSYLDQVKLQFGSQPQVYNDFLDIMKEFKSQSIDTPGVISRVSQLFKGHPDLI 179
Query: 208 SGFHEFMAKCDLMEIDEN 261
GF+ F+ +E+ N
Sbjct: 180 MGFNTFLPPGYKIEVQTN 197
