Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000693A_C01 KCC000693A_c01
(753 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_347098.1| hypothetical protein XP_347097 [Rattus norvegicus] 40 0.030
ref|ZP_00136945.1| COG0697: Permeases of the drug/metabolite tra... 39 0.088
ref|NP_113671.3| itchy homolog E3 ubiquitin protein ligase; atro... 36 0.57
sp|Q96J02|ITCH_HUMAN Itchy homolog E3 ubiquitin protein ligase (... 36 0.57
emb|CAC09387.2| dJ468O1.1 (atrophin 1 interacting protein 4 (AIP... 36 0.57
>ref|XP_347098.1| hypothetical protein XP_347097 [Rattus norvegicus]
Length = 246
Score = 40.4 bits (93), Expect = 0.030
Identities = 30/91 (32%), Positives = 42/91 (45%), Gaps = 7/91 (7%)
Frame = -1
Query: 750 FANLDSACEAFCWSKFPTSDRTRPASCAGERQLFIRRFNRRRGVSCSALDSAVSSRSSPP 571
F +A E + +R RP SC+ + + + R GV CS DS +++ +SPP
Sbjct: 76 FKQYSAALETLITTMMIDEERERPMSCSSVKMVRLLRGFFCLGVGCSVSDSLLAN-ASPP 134
Query: 570 GCTAAAPLCTPRRAPA-------RALTGAEQ 499
G +AAA A A R LTGA Q
Sbjct: 135 GVSAAAAAAAAAAAAAASAATAWRVLTGACQ 165
>ref|ZP_00136945.1| COG0697: Permeases of the drug/metabolite transporter (DMT)
superfamily [Pseudomonas aeruginosa UCBPP-PA14]
Length = 166
Score = 38.9 bits (89), Expect = 0.088
Identities = 34/112 (30%), Positives = 45/112 (39%)
Frame = -1
Query: 570 GCTAAAPLCTPRRAPARALTGAEQFLPDVLVGPPLPVQGTGKRRLELLYNTVVVVLLWAA 391
GC AAA R PA A+ G + LP+ GP P G + LL A
Sbjct: 11 GCRAAADQQRQRPLPAGAVAGRRRTLPERQPGPGDPAAGA----------PMSAALLLAT 60
Query: 390 RLFIAQAQALWTMAEFAELSLAADGHTLCPQRYVSRIRRPFAWPAMLSRGPG 235
L Q + +AADG T +R+R P+ W A+L+ G G
Sbjct: 61 LLMTGLGQVAQKLTVEHWRLVAADGWT-------ARLRSPWPWLALLALGLG 105
>ref|NP_113671.3| itchy homolog E3 ubiquitin protein ligase; atrophin-1 interacting
protein 4; itchy (mouse homolog) E3 ubiquitin protein
ligase; NFE2-associated polypeptide 1; ubiquitin protein
ligase ITCH [Homo sapiens] gi|13366088|dbj|BAB39389.1|
ubiquitin protein ligase Itch [Homo sapiens]
gi|13785518|gb|AAK39399.1|AF095745_1 ubiquitin protein
ligase ITCH [Homo sapiens]
Length = 862
Score = 36.2 bits (82), Expect = 0.57
Identities = 31/101 (30%), Positives = 37/101 (35%)
Frame = +2
Query: 176 SQRLSQS*RSPYRPPAPYRCPGPLESIAGHANGRLMRLT*RCGHSVCPSAASESSANSAI 355
S LS P RPP P R P P NG PSA SES +S
Sbjct: 199 SPSLSNGGFKPSRPPRPSRPPPPTPRRPASVNG-------------SPSATSESDGSST- 244
Query: 356 VHSAWA*AMKSLAAHNNTTTTVLYRSSSLLLPVPCTGRGGP 478
SL N T T +S L++P+ +G GP
Sbjct: 245 ---------GSLPPTNTNTNTSEGATSGLIIPLTISGGSGP 276
>sp|Q96J02|ITCH_HUMAN Itchy homolog E3 ubiquitin protein ligase (Itch)
(Atrophin-1-interacting protein 4) (AIP4)
(NFE2-associated polypeptide 1) (NAPP1)
gi|15079474|gb|AAH11571.1| ITCH protein [Homo sapiens]
Length = 903
Score = 36.2 bits (82), Expect = 0.57
Identities = 31/101 (30%), Positives = 37/101 (35%)
Frame = +2
Query: 176 SQRLSQS*RSPYRPPAPYRCPGPLESIAGHANGRLMRLT*RCGHSVCPSAASESSANSAI 355
S LS P RPP P R P P NG PSA SES +S
Sbjct: 240 SPSLSNGGFKPSRPPRPSRPPPPTPRRPASVNG-------------SPSATSESDGSST- 285
Query: 356 VHSAWA*AMKSLAAHNNTTTTVLYRSSSLLLPVPCTGRGGP 478
SL N T T +S L++P+ +G GP
Sbjct: 286 ---------GSLPPTNTNTNTSEGATSGLIIPLTISGGSGP 317
>emb|CAC09387.2| dJ468O1.1 (atrophin 1 interacting protein 4 (AIP4)) [Homo sapiens]
Length = 703
Score = 36.2 bits (82), Expect = 0.57
Identities = 31/101 (30%), Positives = 37/101 (35%)
Frame = +2
Query: 176 SQRLSQS*RSPYRPPAPYRCPGPLESIAGHANGRLMRLT*RCGHSVCPSAASESSANSAI 355
S LS P RPP P R P P NG PSA SES +S
Sbjct: 40 SPSLSNGGFKPSRPPRPSRPPPPTPRRPASVNG-------------SPSATSESDGSST- 85
Query: 356 VHSAWA*AMKSLAAHNNTTTTVLYRSSSLLLPVPCTGRGGP 478
SL N T T +S L++P+ +G GP
Sbjct: 86 ---------GSLPPTNTNTNTSEGATSGLIIPLTISGGSGP 117
