Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000687A_C01 KCC000687A_c01
(1356 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAL35384.1|AF442558_1 serine hydroxymethyltransferase [Chlamy... 891 0.0
sp|P34899|GLYM_PEA SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIA... 640 0.0
gb|AAP44712.1| putative glycine hydroxymethyltransferase [Oryza ... 639 0.0
ref|NP_195506.1| glycine hydroxymethyltransferase like protein [... 636 0.0
sp|P50433|GLYM_SOLTU SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDR... 635 0.0
>gb|AAL35384.1|AF442558_1 serine hydroxymethyltransferase [Chlamydomonas reinhardtii]
Length = 520
Score = 891 bits (2303), Expect = 0.0
Identities = 447/447 (100%), Positives = 447/447 (100%)
Frame = +3
Query: 3 VQGISQLARALSSAHAVAGQRCFAAQPALSNEEEYSRFSQDASRAHVTWPKVLNAGLAEV 182
VQGISQLARALSSAHAVAGQRCFAAQPALSNEEEYSRFSQDASRAHVTWPKVLNAGLAEV
Sbjct: 5 VQGISQLARALSSAHAVAGQRCFAAQPALSNEEEYSRFSQDASRAHVTWPKVLNAGLAEV 64
Query: 183 DPDLFDIIEKEKNRQFKGLELIPSENFVSASVMEAVGSVMTNKYSEGYPGARYYGGNEFI 362
DPDLFDIIEKEKNRQFKGLELIPSENFVSASVMEAVGSVMTNKYSEGYPGARYYGGNEFI
Sbjct: 65 DPDLFDIIEKEKNRQFKGLELIPSENFVSASVMEAVGSVMTNKYSEGYPGARYYGGNEFI 124
Query: 363 DQAERLCQERALKAFHLDPAQWGVNVQSLSGSPSNFQVYTALLQPHDRIMALDLPHGGHL 542
DQAERLCQERALKAFHLDPAQWGVNVQSLSGSPSNFQVYTALLQPHDRIMALDLPHGGHL
Sbjct: 125 DQAERLCQERALKAFHLDPAQWGVNVQSLSGSPSNFQVYTALLQPHDRIMALDLPHGGHL 184
Query: 543 SHGYQTDTKKISATSIYFEQMPYRLNEETGLIDYDMLEKTAVLFRPKLIVAGASAYTRHY 722
SHGYQTDTKKISATSIYFEQMPYRLNEETGLIDYDMLEKTAVLFRPKLIVAGASAYTRHY
Sbjct: 185 SHGYQTDTKKISATSIYFEQMPYRLNEETGLIDYDMLEKTAVLFRPKLIVAGASAYTRHY 244
Query: 723 DYARMRAIADKVGAWLLADMAHISGLVAADLVPSPFGFADVVTTTTHKSLRGPRGAMIFY 902
DYARMRAIADKVGAWLLADMAHISGLVAADLVPSPFGFADVVTTTTHKSLRGPRGAMIFY
Sbjct: 245 DYARMRAIADKVGAWLLADMAHISGLVAADLVPSPFGFADVVTTTTHKSLRGPRGAMIFY 304
Query: 903 RKGVRRTDAKTGKPINYDIEDKINFAVFPGLQGGPHNHTIAGLACALKQAATPEFKSYQQ 1082
RKGVRRTDAKTGKPINYDIEDKINFAVFPGLQGGPHNHTIAGLACALKQAATPEFKSYQQ
Sbjct: 305 RKGVRRTDAKTGKPINYDIEDKINFAVFPGLQGGPHNHTIAGLACALKQAATPEFKSYQQ 364
Query: 1083 QVLSNSQALAGALAKRGFKLVSGGTDNHIVLVDLRPKGVDGSRVERVLELAHIAANKNTV 1262
QVLSNSQALAGALAKRGFKLVSGGTDNHIVLVDLRPKGVDGSRVERVLELAHIAANKNTV
Sbjct: 365 QVLSNSQALAGALAKRGFKLVSGGTDNHIVLVDLRPKGVDGSRVERVLELAHIAANKNTV 424
Query: 1263 PGDVSALVPGGLRMGSPALTSRGFVEK 1343
PGDVSALVPGGLRMGSPALTSRGFVEK
Sbjct: 425 PGDVSALVPGGLRMGSPALTSRGFVEK 451
>sp|P34899|GLYM_PEA SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL PRECURSOR (SERINE
METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT)
gi|282928|pir||A42906 glycine hydroxymethyltransferase
(EC 2.1.2.1) - garden pea gi|169158|gb|AAA33687.1| serine
hydroxymethyltransferase
Length = 518
Score = 640 bits (1651), Expect = 0.0
Identities = 320/439 (72%), Positives = 366/439 (82%)
Frame = +3
Query: 27 RALSSAHAVAGQRCFAAQPALSNEEEYSRFSQDASRAHVTWPKVLNAGLAEVDPDLFDII 206
R LSS+ + + F+A D VTWPK LN+ L +DP++ DII
Sbjct: 8 RKLSSSVNKSSRPLFSASSLYYKSSLPDEAVYDKENPRVTWPKQLNSPLEVIDPEIADII 67
Query: 207 EKEKNRQFKGLELIPSENFVSASVMEAVGSVMTNKYSEGYPGARYYGGNEFIDQAERLCQ 386
E EK RQ+KGLELIPSENF S SVM+AVGSVMTNKYSEGYPGARYYGGNE+ID AE LCQ
Sbjct: 68 ELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQ 127
Query: 387 ERALKAFHLDPAQWGVNVQSLSGSPSNFQVYTALLQPHDRIMALDLPHGGHLSHGYQTDT 566
+RAL+AF LDPA+WGVNVQ LSGSPSNFQVYTALL+PHDRIMALDLPHGGHLSHGYQTDT
Sbjct: 128 KRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLSHGYQTDT 187
Query: 567 KKISATSIYFEQMPYRLNEETGLIDYDMLEKTAVLFRPKLIVAGASAYTRHYDYARMRAI 746
KKISA SI+FE MPYRL+E TG IDYD LEK+A LFRPKLIVAGASAY R YDYAR+R +
Sbjct: 188 KKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYARIRKV 247
Query: 747 ADKVGAWLLADMAHISGLVAADLVPSPFGFADVVTTTTHKSLRGPRGAMIFYRKGVRRTD 926
DK A LLADMAHISGLVAA ++PSPF +ADVVTTTTHKSLRGPRGAMIF+RKG++ +
Sbjct: 248 CDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFRKGLKEVN 307
Query: 927 AKTGKPINYDIEDKINFAVFPGLQGGPHNHTIAGLACALKQAATPEFKSYQQQVLSNSQA 1106
K GK + YD EDKIN AVFPGLQGGPHNHTI GLA ALKQA TPE+++YQ+QVLSNS
Sbjct: 308 -KQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSSK 366
Query: 1107 LAGALAKRGFKLVSGGTDNHIVLVDLRPKGVDGSRVERVLELAHIAANKNTVPGDVSALV 1286
A AL+++G+ LVSGGT+NH+VLV+L+ KG+DGSRVE+VLEL HIAANKNTVPGDVSA+V
Sbjct: 367 FAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPGDVSAMV 426
Query: 1287 PGGLRMGSPALTSRGFVEK 1343
PGG+RMG+PALTSRGFVE+
Sbjct: 427 PGGIRMGTPALTSRGFVEE 445
>gb|AAP44712.1| putative glycine hydroxymethyltransferase [Oryza sativa (japonica
cultivar-group)]
Length = 557
Score = 639 bits (1648), Expect = 0.0
Identities = 315/404 (77%), Positives = 355/404 (86%)
Frame = +3
Query: 132 RAHVTWPKVLNAGLAEVDPDLFDIIEKEKNRQFKGLELIPSENFVSASVMEAVGSVMTNK 311
R+ VTWPK LNA L EVDP++ DIIE EK RQ+KGLELIPSENF S SVM+AVGSVMTNK
Sbjct: 82 RSGVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVMTNK 141
Query: 312 YSEGYPGARYYGGNEFIDQAERLCQERALKAFHLDPAQWGVNVQSLSGSPSNFQVYTALL 491
YSEGYPGARYYGGNE+ID AE LCQ+RAL+AF LDPA+WGVNVQ LSGSP+NF VYTALL
Sbjct: 142 YSEGYPGARYYGGNEYIDMAESLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALL 201
Query: 492 QPHDRIMALDLPHGGHLSHGYQTDTKKISATSIYFEQMPYRLNEETGLIDYDMLEKTAVL 671
+PH+RIMALDLPHGGHLSHGYQTDTKKISA SI+FE MPYRL+E TGLIDYD +EK+AVL
Sbjct: 202 KPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGLIDYDQMEKSAVL 261
Query: 672 FRPKLIVAGASAYTRHYDYARMRAIADKVGAWLLADMAHISGLVAADLVPSPFGFADVVT 851
FRPKLIVAGASAY R YDY RMR + DK A LLADMAHISGLVAA +VPSPF +ADVVT
Sbjct: 262 FRPKLIVAGASAYARLYDYDRMRKVCDKQKAILLADMAHISGLVAAGVVPSPFDYADVVT 321
Query: 852 TTTHKSLRGPRGAMIFYRKGVRRTDAKTGKPINYDIEDKINFAVFPGLQGGPHNHTIAGL 1031
TTTHKSLRGPRGAMIFYRKGV+ + K GK + YD EDKIN AVFPGLQGGPHNHTI GL
Sbjct: 322 TTTHKSLRGPRGAMIFYRKGVKGVN-KQGKEVMYDFEDKINAAVFPGLQGGPHNHTITGL 380
Query: 1032 ACALKQAATPEFKSYQQQVLSNSQALAGALAKRGFKLVSGGTDNHIVLVDLRPKGVDGSR 1211
A ALKQA TPE+++YQ+QV+SN A +L +G++LVSGGTDNH+VLV+L+ KG+DGSR
Sbjct: 381 AVALKQATTPEYRAYQEQVMSNCAKFAQSLTAKGYELVSGGTDNHLVLVNLKSKGIDGSR 440
Query: 1212 VERVLELAHIAANKNTVPGDVSALVPGGLRMGSPALTSRGFVEK 1343
VE+VLE HIAANKNTVPGDVSA+VPGG+RMG+PALTSRGFVE+
Sbjct: 441 VEKVLENVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFVEE 484
>ref|NP_195506.1| glycine hydroxymethyltransferase like protein [Arabidopsis thaliana]
gi|7433551|pir||T05620 glycine hydroxymethyltransferase
(EC 2.1.2.1) F20D10.50 - Arabidopsis thaliana
gi|4467099|emb|CAB37533.1| glycine
hydroxymethyltransferase like protein [Arabidopsis
thaliana] gi|6899945|emb|CAB71289.1| serine hydroxymethyl
transferase [Arabidopsis thaliana]
gi|7270776|emb|CAB80458.1| glycine
hydroxymethyltransferase like protein [Arabidopsis
thaliana] gi|16226393|gb|AAL16156.1|AF428388_1
AT4g37930/F20D10_50 [Arabidopsis thaliana]
gi|16323083|gb|AAL15276.1| AT4g37930/F20D10_50
[Arabidopsis thaliana] gi|17979462|gb|AAL50068.1|
AT4g37930/F20D10_50 [Arabidopsis thaliana]
gi|30102486|gb|AAP21161.1| At4g37930/F20D10_50
[Arabidopsis thaliana]
Length = 517
Score = 636 bits (1640), Expect = 0.0
Identities = 311/407 (76%), Positives = 356/407 (87%)
Frame = +3
Query: 123 DASRAHVTWPKVLNAGLAEVDPDLFDIIEKEKNRQFKGLELIPSENFVSASVMEAVGSVM 302
+ R+ VTWPK LNA L EVDP++ DIIE EK RQ+KGLELIPSENF S SVM+AVGSVM
Sbjct: 39 EKERSRVTWPKQLNAPLEEVDPEIADIIEHEKARQWKGLELIPSENFTSVSVMQAVGSVM 98
Query: 303 TNKYSEGYPGARYYGGNEFIDQAERLCQERALKAFHLDPAQWGVNVQSLSGSPSNFQVYT 482
TNKYSEGYPGARYYGGNE+ID AE LCQ+RAL+AF LDP +WGVNVQ LSGSP+NF VYT
Sbjct: 99 TNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFHVYT 158
Query: 483 ALLQPHDRIMALDLPHGGHLSHGYQTDTKKISATSIYFEQMPYRLNEETGLIDYDMLEKT 662
ALL+PH+RIMALDLPHGGHLSHGYQTDTKKISA SI+FE MPYRL+E TG IDYD +EK+
Sbjct: 159 ALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQMEKS 218
Query: 663 AVLFRPKLIVAGASAYTRHYDYARMRAIADKVGAWLLADMAHISGLVAADLVPSPFGFAD 842
A LFRPKLIVAGASAY R YDYAR+R + +K A +LADMAHISGLVAA+++PSPF +AD
Sbjct: 219 ATLFRPKLIVAGASAYARLYDYARIRKVCNKQKAVMLADMAHISGLVAANVIPSPFDYAD 278
Query: 843 VVTTTTHKSLRGPRGAMIFYRKGVRRTDAKTGKPINYDIEDKINFAVFPGLQGGPHNHTI 1022
VVTTTTHKSLRGPRGAMIF+RKGV+ + K GK + YD EDKIN AVFPGLQGGPHNHTI
Sbjct: 279 VVTTTTHKSLRGPRGAMIFFRKGVKEIN-KQGKEVLYDFEDKINQAVFPGLQGGPHNHTI 337
Query: 1023 AGLACALKQAATPEFKSYQQQVLSNSQALAGALAKRGFKLVSGGTDNHIVLVDLRPKGVD 1202
GLA ALKQA T E+K+YQ+QVLSNS A L +RG++LVSGGTDNH+VLV+L+PKG+D
Sbjct: 338 TGLAVALKQATTSEYKAYQEQVLSNSAKFAQTLMERGYELVSGGTDNHLVLVNLKPKGID 397
Query: 1203 GSRVERVLELAHIAANKNTVPGDVSALVPGGLRMGSPALTSRGFVEK 1343
GSRVE+VLE HIA+NKNTVPGDVSA+VPGG+RMG+PALTSRGFVE+
Sbjct: 398 GSRVEKVLEAVHIASNKNTVPGDVSAMVPGGIRMGTPALTSRGFVEE 444
>sp|P50433|GLYM_SOLTU SERINE HYDROXYMETHYLTRANSFERASE, MITOCHONDRIAL PRECURSOR (SERINE
METHYLASE) (GLYCINE HYDROXYMETHYLTRANSFERASE) (SHMT)
gi|481944|pir||S40218 glycine hydroxymethyltransferase
(EC 2.1.2.1) - potato gi|438247|emb|CAA81082.1| glycine
hydroxymethyltransferase [Solanum tuberosum]
Length = 518
Score = 635 bits (1637), Expect = 0.0
Identities = 315/420 (75%), Positives = 360/420 (85%)
Frame = +3
Query: 84 ALSNEEEYSRFSQDASRAHVTWPKVLNAGLAEVDPDLFDIIEKEKNRQFKGLELIPSENF 263
+L NE Y D ++ V WPK LNA L VDP++ DIIE EK RQ+KGLELIPSENF
Sbjct: 32 SLPNEAVY-----DKEKSGVAWPKQLNAPLEVVDPEIADIIEHEKARQWKGLELIPSENF 86
Query: 264 VSASVMEAVGSVMTNKYSEGYPGARYYGGNEFIDQAERLCQERALKAFHLDPAQWGVNVQ 443
S SVM+AVGSVMTNKYSEGYPGARYYGGNE+ID AE LCQ+RAL+AF LDPA+WGVNVQ
Sbjct: 87 TSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYIDMAETLCQKRALEAFRLDPAKWGVNVQ 146
Query: 444 SLSGSPSNFQVYTALLQPHDRIMALDLPHGGHLSHGYQTDTKKISATSIYFEQMPYRLNE 623
LSGSP+NFQVYTALL+PH+RIMALDLPHGGHLSHGYQTDTKKISA SI+FE MPYRL+E
Sbjct: 147 PLSGSPANFQVYTALLKPHERIMALDLPHGGHLSHGYQTDTKKISAVSIFFETMPYRLDE 206
Query: 624 ETGLIDYDMLEKTAVLFRPKLIVAGASAYTRHYDYARMRAIADKVGAWLLADMAHISGLV 803
TG IDYD LEK+A LFRPKLIVAGASAY R YDY R+R + +K A LLADMAHISGLV
Sbjct: 207 STGYIDYDQLEKSATLFRPKLIVAGASAYARLYDYDRIRKVCNKQKAILLADMAHISGLV 266
Query: 804 AADLVPSPFGFADVVTTTTHKSLRGPRGAMIFYRKGVRRTDAKTGKPINYDIEDKINFAV 983
AA ++PSPF +ADVVTTTTHKSLRGPRGAMIFYRKGV+ + K GK + YD EDKIN AV
Sbjct: 267 AAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYRKGVKEVN-KQGKEVFYDYEDKINQAV 325
Query: 984 FPGLQGGPHNHTIAGLACALKQAATPEFKSYQQQVLSNSQALAGALAKRGFKLVSGGTDN 1163
FPGLQGGPHNHTI GLA ALKQA TPE+++YQ+QVLSNS A AL ++G++LVSGGTDN
Sbjct: 326 FPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQVLSNSSKFAQALGEKGYELVSGGTDN 385
Query: 1164 HIVLVDLRPKGVDGSRVERVLELAHIAANKNTVPGDVSALVPGGLRMGSPALTSRGFVEK 1343
H+VLV+++ KG+DGSRVE+VLE HIAANKNTVPGDVSA+VPGG+RMG+PALTSRGF+E+
Sbjct: 386 HLVLVNMKNKGIDGSRVEKVLEAVHIAANKNTVPGDVSAMVPGGIRMGTPALTSRGFLEE 445
