KCC000675A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000675A_C01 KCC000675A_c01
tcaatgCGTAGATATAATTGCAATGAGCTAGTATAGGGCCTCTCTCGTGACTCGGGCACG
TCGTTTGATATTGCAGCGATGGCTGCGAAACCCCAACAAGCGGGCACCGGCAGAAAACCT
CTAAATGAAAGCGAGGCAAAGAGCCAGAAGCGAACCCTAGAGCTATTAGCGGAGGACTGC
AAGCGCATTTGCACAACCAACGTCGGGAAGCCCTTCACCACGCTCCAGGATGCCATTGAG
CACCTCTTGCCATTCCATGTGCTGAGCAGCCTTTCTGGTGATGACGTGGACGAGGAGGAG
GCTGCGGCGGCCGCGGAAGAGGGTGCGCGGCTGCTGTGCACGCGGCGGGACCTGGCGCAG
GAGCTGGCTACGCGGCGTGCGGTGGAGCTGCACGTGAAGGTGGACGAGATGCGGCAACGC
CTGGTGAAGCTGGAGGACCGCTACCGCACGCGGCACTCCCGGCCGCTGCCGGAGGAGGAG
CTGTTCATCGCGCAGGTGTTGAAAGAGGTGTCGGAGCGGGCGCTCGAAGCGGAGCGCGCG
AAGCCCCCCGTCATGAACT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000675A_C01 KCC000675A_c01
         (559 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|...    61  9e-09
emb|CAC14218.1| TapA protein [Acidithiobacillus ferrooxidans]          59  3e-08
ref|NP_179095.1| arabinogalactan-protein (AGP9) [Arabidopsis tha...    59  4e-08
gb|AAG40020.2|AF324669_1 At2g14890 [Arabidopsis thaliana]              59  4e-08
pir||T08148 proline-rich myrosinase-binding protein homolog - ra...    56  3e-07

>ref|NP_767161.1| blr0521 [Bradyrhizobium japonicum] gi|27348769|dbj|BAC45786.1|
           blr0521 [Bradyrhizobium japonicum USDA 110]
          Length = 745

 Score = 61.2 bits (147), Expect = 9e-09
 Identities = 44/100 (44%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
 Frame = -1

Query: 550 RGASRAPLRAP-----APTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAA 386
           R A+  P  AP     AP P + P R  APPP     AA  + PP  P  AA + PS   
Sbjct: 66  RPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPKQPS--- 122

Query: 385 PPHAA*P---APAPGPAACTAAAHPLPRPPQPPP--RPRH 281
           PP AA P   AP P P A   AA P P PP PPP   P+H
Sbjct: 123 PPPAAAPQQHAPTPPPPA-PPAARPAPTPPAPPPAAAPQH 161

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 33/80 (41%), Positives = 36/80 (44%)
 Frame = -1

Query: 535 APLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPA 356
           AP R  AP P + P    A PP AA      + PP  P  AA   P    PP AA   P+
Sbjct: 63  APARPAAPPPAAAPPHPPAAPPPAAAPPRPAAPPPPPPPPAARPAPPPPPPPPAAPKQPS 122

Query: 355 PGPAACTAAAHPLPRPPQPP 296
           P PAA      P P PP PP
Sbjct: 123 PPPAAAPQQHAPTPPPPAPP 142

 Score = 58.5 bits (140), Expect = 6e-08
 Identities = 36/80 (45%), Positives = 37/80 (46%)
 Frame = -1

Query: 532 PLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPAP 353
           P   P   P + PAR  APPPAAA        PP  P      PP  AAPP  A P P P
Sbjct: 52  PKGPPGAAPPAAPARPAAPPPAAA--------PPHPPAA----PPPAAAPPRPAAPPPPP 99

Query: 352 GPAACTAAAHPLPRPPQPPP 293
            P A    A P P PP PPP
Sbjct: 100 PPPA----ARPAPPPPPPPP 115

 Score = 56.6 bits (135), Expect = 2e-07
 Identities = 36/81 (44%), Positives = 43/81 (52%), Gaps = 1/81 (1%)
 Frame = -1

Query: 532 PLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRP-PSRAAPPHAA*PAPA 356
           P   P P P + P +  +PPPAAA      + PP +P   A+RP P+  APP AA P  A
Sbjct: 106 PAPPPPPPPPAAPKQ-PSPPPAAAPQQHAPTPPPPAP--PAARPAPTPPAPPPAAAPQHA 162

Query: 355 PGPAACTAAAHPLPRPPQPPP 293
           P P     AA P P PP PPP
Sbjct: 163 PPPPP-PPAARPTPTPPPPPP 182

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 30/79 (37%), Positives = 32/79 (39%)
 Frame = -1

Query: 523 APAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPAPGPA 344
           AP P P + PA   AP P A   AA     P  P   A+RP     PP  A PA  P PA
Sbjct: 133 APTPPPPAPPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPA 192

Query: 343 ACTAAAHPLPRPPQPPPRP 287
                    P P  P  RP
Sbjct: 193 PTATPTPVAPPPAAPTARP 211

 Score = 50.1 bits (118), Expect = 2e-05
 Identities = 37/96 (38%), Positives = 41/96 (42%), Gaps = 8/96 (8%)
 Frame = -1

Query: 550 RGASRAPLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPAS------PGVAASRPPSRA 389
           R  S AP   PAPTP   P    AP    A  +  G+ PPA       PGV    PP+  
Sbjct: 210 RPGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGA-PPAGRPGAPPPGVRPGSPPAAG 268

Query: 388 APP-HAA*PAPAPGPAACTAAAHPLPRP-PQPPPRP 287
           +PP   A PAP   PA    A  P  RP P   P P
Sbjct: 269 SPPAPGATPAPTTTPAPGGTATPPSGRPGPASTPAP 304

 Score = 48.5 bits (114), Expect = 6e-05
 Identities = 33/86 (38%), Positives = 39/86 (44%), Gaps = 8/86 (9%)
 Frame = -1

Query: 526 RAPAPTPLSTPAR*T-APPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPAP- 353
           + P+P P + P +    PPP A  +A     PPA P  AA +      PP AA P P P 
Sbjct: 119 KQPSPPPAAAPQQHAPTPPPPAPPAARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPP 178

Query: 352 -----GPAA-CTAAAHPLPRPPQPPP 293
                GPAA  T A    P P  PPP
Sbjct: 179 PPPPAGPAARPTPAPTATPTPVAPPP 204

 Score = 48.1 bits (113), Expect = 8e-05
 Identities = 36/98 (36%), Positives = 40/98 (40%)
 Frame = -1

Query: 532 PLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPAP 353
           P   P P P +TP    APPPAA  +A  GS  PA+       P   A P   A PAP  
Sbjct: 185 PAARPTPAPTATPTP-VAPPPAAP-TARPGSPAPAATPAPTPTPAPTATPAPTATPAPGS 242

Query: 352 GPAACTAAAHPLPRPPQPPPRPRHHQKGCSAHGMARGA 239
            P      A P  RP  PPP  R      +    A GA
Sbjct: 243 TP-----GAPPAGRPGAPPPGVRPGSPPAAGSPPAPGA 275

 Score = 48.1 bits (113), Expect = 8e-05
 Identities = 34/88 (38%), Positives = 41/88 (45%)
 Frame = -1

Query: 550 RGASRAPLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA 371
           +GAS   +    P       +   PP    G+A     PPA+P   A+ PP+ AAPPH  
Sbjct: 27  QGASPLVVAQAQPQETGPDGKPKQPPKGPPGAA-----PPAAPARPAAPPPA-AAPPH-- 78

Query: 370 *PAPAPGPAACTAAAHPLPRPPQPPPRP 287
            P  AP PAA    A P P  P PPP P
Sbjct: 79  -PPAAPPPAA----APPRPAAPPPPPPP 101

 Score = 47.8 bits (112), Expect = 1e-04
 Identities = 35/111 (31%), Positives = 40/111 (35%), Gaps = 34/111 (30%)
 Frame = -1

Query: 520 PAPTPLSTPAR*TAPPPAAAG-------------SAACGSGPPASPGVAASRPPSRAAPP 380
           PAPT    P     PPP   G             + A  +G PA+P  A   P   AAP 
Sbjct: 309 PAPTATPAPGGALTPPPGRPGAGPTPGPQGGTPPAGAPAAGTPAAPPQAGGLPARPAAPA 368

Query: 379 HAA*PAPAPGPAACT---------------------AAAHPLPRPPQPPPR 290
            AA P+  PG AA T                         PLP PP+PP R
Sbjct: 369 GAAAPSTVPGSAAATPPPNRAQFAPPTVTPAFQAAPTVVAPLPPPPRPPQR 419

 Score = 46.2 bits (108), Expect = 3e-04
 Identities = 37/109 (33%), Positives = 45/109 (40%), Gaps = 10/109 (9%)
 Frame = -1

Query: 535 APLRAPAPTP----LSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSR-----AAP 383
           AP  AP P P      TP   T PPP  AG AA  +  P +     + PP+       +P
Sbjct: 158 APQHAPPPPPPPAARPTP---TPPPPPPAGPAARPTPAPTATPTPVAPPPAAPTARPGSP 214

Query: 382 PHAA*PAPAPGPA-ACTAAAHPLPRPPQPPPRPRHHQKGCSAHGMARGA 239
             AA PAP P PA   T A    P P   P  P   + G    G+  G+
Sbjct: 215 APAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGS 263

 Score = 45.8 bits (107), Expect = 4e-04
 Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 7/93 (7%)
 Frame = -1

Query: 544 ASRAPLRAPAPTPLSTPAR*TAPPPAAAGSAA------CGSGPPASPGVAASRPPSRAAP 383
           A+R     PAP P + P     PPP  A            +GP A P  A +  P+  AP
Sbjct: 143 AARPAPTPPAPPPAAAPQHAPPPPPPPAARPTPTPPPPPPAGPAARPTPAPTATPTPVAP 202

Query: 382 PHAA*PAPAPGPAACTAAAHPLPRP-PQPPPRP 287
           P AA P   PG  A  A   P P P P   P P
Sbjct: 203 PPAA-PTARPGSPAPAATPAPTPTPAPTATPAP 234

 Score = 43.1 bits (100), Expect = 0.003
 Identities = 39/101 (38%), Positives = 44/101 (42%), Gaps = 17/101 (16%)
 Frame = -1

Query: 547 GASRAPLRAPAPTPLSTPAR*TAPP---PAAAGSAACGSGPPA-----SPGVAASRPPSR 392
           G+  AP   PAPT    P     PP   P  A + A G+  PA     +PG A + PP R
Sbjct: 268 GSPPAPGATPAPTTTPAPGGTATPPSGRPGPASTPAPGAATPAPTATPAPGGALTPPPGR 327

Query: 391 --AAP---PHAA*PAPAPGPAACTAAAHP----LPRPPQPP 296
             A P   P    P PA  PAA T AA P    LP  P  P
Sbjct: 328 PGAGPTPGPQGGTP-PAGAPAAGTPAAPPQAGGLPARPAAP 367

 Score = 42.7 bits (99), Expect = 0.003
 Identities = 38/101 (37%), Positives = 43/101 (41%), Gaps = 15/101 (14%)
 Frame = -1

Query: 544 ASRAPLRAPAP--TPLSTPA-R*TAPPPAAA-GSAACGSGPPA-----------SPGVAA 410
           A+ AP   PAP  TP + PA R  APPP    GS      PPA           +PG  A
Sbjct: 230 ATPAPTATPAPGSTPGAPPAGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTA 289

Query: 409 SRPPSRAAPPHAA*PAPAPGPAACTAAAHPLPRPPQPPPRP 287
           + P  R  P  A+ PAP     A TA   P      PP RP
Sbjct: 290 TPPSGRPGP--ASTPAPGAATPAPTATPAPGGALTPPPGRP 328

 Score = 38.1 bits (87), Expect = 0.081
 Identities = 32/101 (31%), Positives = 38/101 (36%), Gaps = 4/101 (3%)
 Frame = -1

Query: 544 ASRAPLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRP-PSRAAPPHAA* 368
           A R     P   P S PA  + P P A  +      P  +    + RP P+    P AA 
Sbjct: 249 AGRPGAPPPGVRPGSPPAAGSPPAPGATPAPTTTPAPGGTATPPSGRPGPASTPAPGAAT 308

Query: 367 PAPAPGPAACTAAAHPLPRP---PQPPPRPRHHQKGCSAHG 254
           PAP   PA   A   P  RP   P P P+      G  A G
Sbjct: 309 PAPTATPAPGGALTPPPGRPGAGPTPGPQGGTPPAGAPAAG 349

 Score = 38.1 bits (87), Expect = 0.081
 Identities = 29/88 (32%), Positives = 36/88 (39%), Gaps = 5/88 (5%)
 Frame = -1

Query: 535 APLRAP---APTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPP--SRAAPPHAA 371
           AP   P   AP P +  AR  +P PAA  +      P A+P   A+  P  +  APP   
Sbjct: 192 APTATPTPVAPPPAAPTARPGSPAPAATPAPTPTPAPTATPAPTATPAPGSTPGAPPAGR 251

Query: 370 *PAPAPGPAACTAAAHPLPRPPQPPPRP 287
             AP PG    +  A   P  P   P P
Sbjct: 252 PGAPPPGVRPGSPPAAGSPPAPGATPAP 279

>emb|CAC14218.1| TapA protein [Acidithiobacillus ferrooxidans]
          Length = 875

 Score = 59.3 bits (142), Expect = 3e-08
 Identities = 38/84 (45%), Positives = 42/84 (49%), Gaps = 1/84 (1%)
 Frame = -1

Query: 535 APLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPA 356
           AP  APAP P   PA   AP PA A + A    P  +P  A +  P+ A  P  A PAPA
Sbjct: 586 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPA-PAPA 644

Query: 355 PGPAACTAAAHPLPRP-PQPPPRP 287
           P PA   A A P P P P P P P
Sbjct: 645 PAPAPAPAPA-PAPAPAPAPAPAP 667

 Score = 58.2 bits (139), Expect = 8e-08
 Identities = 38/84 (45%), Positives = 42/84 (49%), Gaps = 2/84 (2%)
 Frame = -1

Query: 532 PLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRA-APPHAA*PAPA 356
           P  APAP P   PA   AP PA A + A    P  +P  A +  P+ A AP  A  PAPA
Sbjct: 583 PTPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPA 642

Query: 355 PGPAACTAAAHPLPRP-PQPPPRP 287
           P PA   A A P P P P P P P
Sbjct: 643 PAPAPAPAPA-PAPAPAPAPAPAP 665

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 36/81 (44%), Positives = 40/81 (48%), Gaps = 2/81 (2%)
 Frame = -1

Query: 523 APAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRA-APPHAA*PAPAPGP 347
           A  PTP   PA   AP PA A + A    P  +P  A +  P+ A AP  A  PAPAP P
Sbjct: 580 AGTPTPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 639

Query: 346 AACTAAAHPLPRP-PQPPPRP 287
           A   A A P P P P P P P
Sbjct: 640 APAPAPA-PAPAPAPAPAPAP 659

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 33/78 (42%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
 Frame = -1

Query: 535 APLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRA-APPHAA*PAP 359
           AP  APAP P   PA   AP PA A + A    P  +P  A +  P+ A AP  A  PAP
Sbjct: 598 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 657

Query: 358 APGPAACTAAAHPLPRPP 305
           AP PA   A    L   P
Sbjct: 658 APAPAPAPAPGVTLSNAP 675

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 31/71 (43%), Positives = 35/71 (48%), Gaps = 1/71 (1%)
 Frame = -1

Query: 535 APLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRA-APPHAA*PAP 359
           AP  APAP P   PA   AP PA A + A    P  +P  A +  P+ A AP  A  PAP
Sbjct: 606 APAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAP 665

Query: 358 APGPAACTAAA 326
           APG     A A
Sbjct: 666 APGVTLSNAPA 676

 Score = 39.7 bits (91), Expect = 0.028
 Identities = 25/57 (43%), Positives = 26/57 (44%), Gaps = 1/57 (1%)
 Frame = -1

Query: 454 AACGSGPPASPGVAASRPPSRAAPPHAA*PAPAPGPAACTAAAHPLPRP-PQPPPRP 287
           A  G+  PA     A  P    AP  A  PAPAP PA   A A P P P P P P P
Sbjct: 578 AVAGTPTPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPAPA-PAPAPAPAPAPAP 633

 Score = 35.8 bits (81), Expect = 0.40
 Identities = 25/63 (39%), Positives = 27/63 (42%), Gaps = 1/63 (1%)
 Frame = -1

Query: 472 PAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPAPGPAACTAAAHPLPRP-PQPP 296
           P  + SA   +   A  G     P    AP  A  PAPAP PA   A A P P P P P 
Sbjct: 564 PQMSYSATDATLKMAVAGTPTPAPAPAPAPAPAPAPAPAPAPAPAPAPA-PAPAPAPAPA 622

Query: 295 PRP 287
           P P
Sbjct: 623 PAP 625

 Score = 32.3 bits (72), Expect = 4.4
 Identities = 20/45 (44%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = -1

Query: 535 APLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPG--VAAS 407
           AP  APAP P   PA   AP PA A      + P    G  VAAS
Sbjct: 642 APAPAPAPAPAPAPAPAPAPAPAPAPGVTLSNAPAFHSGRAVAAS 686

>ref|NP_179095.1| arabinogalactan-protein (AGP9) [Arabidopsis thaliana]
           gi|25296190|pir||F84522 probable proline-rich protein
           [imported] - Arabidopsis thaliana
           gi|3650031|gb|AAC61286.1| putative proline-rich protein
           [Arabidopsis thaliana]
           gi|10880495|gb|AAG24277.1|AF195890_1 arabinogalactan
           protein [Arabidopsis thaliana]
           gi|11908042|gb|AAG41450.1|AF326868_1 putative
           proline-rich protein [Arabidopsis thaliana]
           gi|12642860|gb|AAK00372.1|AF339690_1 putative
           proline-rich protein [Arabidopsis thaliana]
           gi|19310460|gb|AAL84965.1| At2g14890/T26I20.5
           [Arabidopsis thaliana] gi|21928071|gb|AAM78064.1|
           At2g14890/T26I20.5 [Arabidopsis thaliana]
          Length = 191

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 38/93 (40%), Positives = 42/93 (44%), Gaps = 7/93 (7%)
 Frame = -1

Query: 544 ASRAPLRAPAPTPLSTPAR*TAPPPA----AAGSAACGSGPPASPGVAASRPPSRAAPPH 377
           A+  P+ AP P   S P   TAPPPA       S    S PPA+P   AS PP  A+PP 
Sbjct: 43  ATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPP 102

Query: 376 AA*P---APAPGPAACTAAAHPLPRPPQPPPRP 287
           A  P    P P P A   A  P P P   P  P
Sbjct: 103 ATPPPVATPPPAPLASPPAQVPAPAPTTKPDSP 135

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 36/100 (36%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
 Frame = -1

Query: 535 APLRAPAPTPLSTPAR*T----APPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA* 368
           AP  A  P P+S+P   +     PPP A+      S PPA+P   A+ PP+  A P A  
Sbjct: 64  APPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQV 123

Query: 367 PAPAPGPAACTAAAHPLPRPPQPPPRPRHHQKGCSAHGMA 248
           PAPAP     T    P P P   PP P     G S   ++
Sbjct: 124 PAPAP----TTKPDSPSPSPSSSPPLPSSDAPGPSTDSIS 159

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 28/80 (35%), Positives = 35/80 (43%)
 Frame = -1

Query: 532 PLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPAP 353
           P   PAP   +TP     PPP +A      S PP    V  + PP+   PP ++ P  +P
Sbjct: 27  PTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPP----VTTAPPPANPPPPVSSPPPASP 82

Query: 352 GPAACTAAAHPLPRPPQPPP 293
            PA     A P P    PPP
Sbjct: 83  PPATPPPVASPPPPVASPPP 102

 Score = 40.0 bits (92), Expect = 0.021
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
 Frame = -1

Query: 433 PASPGVAASRPPSRAAPPHAA*PAPAPGPAACTAAAHPL---PRPPQPPP 293
           P SP  A   PP+   PP AA P P   P   T +  P+   P P  PPP
Sbjct: 23  PTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72

 Score = 35.4 bits (80), Expect = 0.52
 Identities = 29/92 (31%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
 Frame = -1

Query: 526 RAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPA--- 356
           +AP   P +TPA     PP            P +P  AA+ PP  A PP    P P    
Sbjct: 21  QAPTSPPTATPA-----PPT-----------PTTPPPAATPPPVSAPPPVTTSPPPVTTA 64

Query: 355 ------PGPAACTAAAHPLPRPPQP---PPRP 287
                 P P +    A P P  P P   PP P
Sbjct: 65  PPPANPPPPVSSPPPASPPPATPPPVASPPPP 96

 Score = 32.7 bits (73), Expect = 3.4
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
 Frame = -1

Query: 544 ASRAPLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSR------AAP 383
           A+  P+ +P P P+++P   T PP A    A   S P   P  A +  P        ++P
Sbjct: 85  ATPPPVASPPP-PVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSP 143

Query: 382 PHAA*PAPAPGPAACTAAAHPLPRPPQPPPRPRHHQKGCS 263
           P  +  AP P   + +         P P P   + Q G S
Sbjct: 144 PLPSSDAPGPSTDSIS---------PAPSPTDVNDQNGAS 174

>gb|AAG40020.2|AF324669_1 At2g14890 [Arabidopsis thaliana]
          Length = 191

 Score = 58.9 bits (141), Expect = 4e-08
 Identities = 38/93 (40%), Positives = 42/93 (44%), Gaps = 7/93 (7%)
 Frame = -1

Query: 544 ASRAPLRAPAPTPLSTPAR*TAPPPA----AAGSAACGSGPPASPGVAASRPPSRAAPPH 377
           A+  P+ AP P   S P   TAPPPA       S    S PPA+P   AS PP  A+PP 
Sbjct: 43  ATPPPVSAPPPVTTSPPPVTTAPPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPP 102

Query: 376 AA*P---APAPGPAACTAAAHPLPRPPQPPPRP 287
           A  P    P P P A   A  P P P   P  P
Sbjct: 103 ATPPPVATPPPAPLASPPAQVPAPAPTTKPDSP 135

 Score = 54.3 bits (129), Expect = 1e-06
 Identities = 36/100 (36%), Positives = 45/100 (45%), Gaps = 4/100 (4%)
 Frame = -1

Query: 535 APLRAPAPTPLSTPAR*T----APPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA* 368
           AP  A  P P+S+P   +     PPP A+      S PPA+P   A+ PP+  A P A  
Sbjct: 64  APPPANPPPPVSSPPPASPPPATPPPVASPPPPVASPPPATPPPVATPPPAPLASPPAQV 123

Query: 367 PAPAPGPAACTAAAHPLPRPPQPPPRPRHHQKGCSAHGMA 248
           PAPAP     T    P P P   PP P     G S   ++
Sbjct: 124 PAPAP----TTKPDSPSPSPSSSPPLPSSDAPGPSTDSIS 159

 Score = 49.3 bits (116), Expect = 3e-05
 Identities = 28/80 (35%), Positives = 35/80 (43%)
 Frame = -1

Query: 532 PLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPAP 353
           P   PAP   +TP     PPP +A      S PP    V  + PP+   PP ++ P  +P
Sbjct: 27  PTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPP----VTTAPPPANPPPPVSSPPPASP 82

Query: 352 GPAACTAAAHPLPRPPQPPP 293
            PA     A P P    PPP
Sbjct: 83  PPATPPPVASPPPPVASPPP 102

 Score = 41.6 bits (96), Expect = 0.007
 Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
 Frame = -1

Query: 451 ACGSGP-PASPGVAASRPPSRAAPPHAA*PAPAPGPAACTAAAHPL---PRPPQPPP 293
           AC +G  P SP  A   PP+   PP AA P P   P   T +  P+   P P  PPP
Sbjct: 16  ACVTGQAPTSPPTATPAPPTPTTPPPAATPPPVSAPPPVTTSPPPVTTAPPPANPPP 72

 Score = 35.4 bits (80), Expect = 0.52
 Identities = 29/92 (31%), Positives = 34/92 (36%), Gaps = 12/92 (13%)
 Frame = -1

Query: 526 RAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA*PAPA--- 356
           +AP   P +TPA     PP            P +P  AA+ PP  A PP    P P    
Sbjct: 21  QAPTSPPTATPA-----PPT-----------PTTPPPAATPPPVSAPPPVTTSPPPVTTA 64

Query: 355 ------PGPAACTAAAHPLPRPPQP---PPRP 287
                 P P +    A P P  P P   PP P
Sbjct: 65  PPPANPPPPVSSPPPASPPPATPPPVASPPPP 96

 Score = 32.7 bits (73), Expect = 3.4
 Identities = 27/100 (27%), Positives = 40/100 (40%), Gaps = 6/100 (6%)
 Frame = -1

Query: 544 ASRAPLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSR------AAP 383
           A+  P+ +P P P+++P   T PP A    A   S P   P  A +  P        ++P
Sbjct: 85  ATPPPVASPPP-PVASPPPATPPPVATPPPAPLASPPAQVPAPAPTTKPDSPSPSPSSSP 143

Query: 382 PHAA*PAPAPGPAACTAAAHPLPRPPQPPPRPRHHQKGCS 263
           P  +  AP P   + +         P P P   + Q G S
Sbjct: 144 PLPSSDAPGPSTDSIS---------PAPSPTDVNDQNGAS 174

>pir||T08148 proline-rich myrosinase-binding protein homolog - rape  (fragment)
           gi|1655830|gb|AAC08051.1| myrosinase-binding protein
           related protein [Brassica napus]
          Length = 552

 Score = 56.2 bits (134), Expect = 3e-07
 Identities = 39/107 (36%), Positives = 45/107 (41%)
 Frame = -1

Query: 547 GASRAPLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRAAPPHAA* 368
           GA   PLR PAP P  +PA   AP PA     A    P  +PG      P+  A P  + 
Sbjct: 289 GAHFGPLRTPAPAP--SPAPGPAPAPAPGSHPAPAPAPAPAPGQGPRPAPAPGAGPRPS- 345

Query: 367 PAPAPGPAACTAAAHPLPRPPQPPPRPRHHQKGCSAHGMARGAQWHP 227
           PAP PGP    A A    + P+P P P   Q    A   A G    P
Sbjct: 346 PAPGPGPRPAPAPAPAPGQGPRPAPGPAPGQGPHPAPAAAPGTSATP 392

 Score = 47.4 bits (111), Expect = 1e-04
 Identities = 34/98 (34%), Positives = 38/98 (38%), Gaps = 17/98 (17%)
 Frame = -1

Query: 535 APLRAPAPTPLSTPAR*TAPPPAAAGSAACGSGPPASPGVAASRPPSRA----------- 389
           AP  +PAP P   PA  + P PA A + A G GP  +P   A   PS A           
Sbjct: 299 APAPSPAPGPAPAPAPGSHPAPAPAPAPAPGQGPRPAPAPGAGPRPSPAPGPGPRPAPAP 358

Query: 388 ------APPHAA*PAPAPGPAACTAAAHPLPRPPQPPP 293
                  P  A  PAP  GP    AAA      P P P
Sbjct: 359 APAPGQGPRPAPGPAPGQGPHPAPAAAPGTSATPAPAP 396

 Score = 35.8 bits (81), Expect = 0.40
 Identities = 26/76 (34%), Positives = 30/76 (39%), Gaps = 1/76 (1%)
 Frame = -1

Query: 448 CGSGPPASPGVAASRPPSRAAPPHAA*PAPAPGPAACTA-AAHPLPRPPQPPPRPRHHQK 272
           CG    A   + A   P R   P    P+PAPGPA   A  +HP P  P P P P    +
Sbjct: 278 CGRSADAIDALGAHFGPLRTPAPA---PSPAPGPAPAPAPGSHPAP-APAPAPAPGQGPR 333

Query: 271 GCSAHGMARGAQWHPG 224
              A G        PG
Sbjct: 334 PAPAPGAGPRPSPAPG 349



EST assemble image


clone accession position
1 CL54a03_r AV396142 1 559
2 HC032f09_r AV634382 7 538




Chlamydomonas reinhardtii
Kazusa DNA Research Institute