KCC000674A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000674A_C01 KCC000674A_c01
agagcagcgaacacagagcggatttggcgaagttcgcctcgtttggtctggggtgtcgcg
cccccatcgcttcaggcccgGAAGGCAATGGCAGTCAACGGAAGCTTGCGCATTGCGGCT
AGCTAATTGTAGCCGCACGCTTCTTAGATTTTGTACTGGCCAAATATACGTATCCGAGCT
CAGACATACAGCTGAACATCCGAGTCGAGTTCTGCATGCTTCTCCTGCCTCAACTTTCCT
CGCGATCCAAATACTTATTCTTATTGTGTCCGACCGCTCAGACAGCGAGCAAAGGGTGGT
GGCACTCCAACGTCTTTGCAACACCCTTTCCCTTCAGCCCCGCGGCCCCGCGACCTCGCG
CCCTCGCAGCCGACCGCATCCGCCAGCCCCTAACGTGGCACGCGGTCTCGAGCTGCCAGC
TCAGCCGCGCAGACCCTGCCTTGTACGGCCCCCCGGGCATGGGCGCGCGGCACTCCAAAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000674A_C01 KCC000674A_c01
         (480 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|NP_629426.1| putative 2-oxoglutarate dehydrogenase [Streptom...    40  0.019
sp|Q8TDC3|KI11_HUMAN Probable serine/threonine-protein kinase KI...    39  0.032
ref|NP_115806.1| KIAA1811 protein [Homo sapiens] gi|19401874|gb|...    39  0.032
emb|CAD38950.1| hypothetical protein [Homo sapiens]                    39  0.032
gb|AAH16681.1| KIAA1811 protein [Homo sapiens]                         39  0.032

>ref|NP_629426.1| putative 2-oxoglutarate dehydrogenase [Streptomyces coelicolor
           A3(2)] gi|9909917|emb|CAC04496.1| putative
           2-oxoglutarate dehydrogenase [Streptomyces coelicolor
           A3(2)]
          Length = 1272

 Score = 39.7 bits (91), Expect = 0.019
 Identities = 22/54 (40%), Positives = 27/54 (49%)
 Frame = +1

Query: 298 GGTPTSLQHPFPSAPRPRDLAPSQPTASASP*RGTRSRAASSAAQTLPCTAPRA 459
           G  PT      P+AP PR  AP+QP A+A      +  AA+ AA   P T P A
Sbjct: 73  GTVPTDAGSTPPAAPAPRAQAPAQPQAAAPAPAPAKPAAAAPAAPAAPATKPAA 126

>sp|Q8TDC3|KI11_HUMAN Probable serine/threonine-protein kinase KIAA1811
           gi|19401871|gb|AAL87697.1|AF479826_1 putative
           serine/threonine protein kinase [Homo sapiens]
          Length = 794

 Score = 38.9 bits (89), Expect = 0.032
 Identities = 34/97 (35%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
 Frame = +1

Query: 205 SSSACFSCLNFPRDPNTYSYCVRP-LRQRAKGGGTPTSLQHPFPS-APRPRDLA--PSQP 372
           S+    S L+ PR P  +S+   P     A+GGG+PTS     PS  PR       P  P
Sbjct: 453 STGLSSSPLSSPRSP-VFSFSPEPGAGDEARGGGSPTSKTQTLPSRGPRGGGAGEQPPPP 511

Query: 373 TASASP*RGTRSRAASSAAQTL--PCTAPRAWARGTP 477
           +A ++P  G      SS    L  P   PRA   GTP
Sbjct: 512 SARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTP 548

>ref|NP_115806.1| KIAA1811 protein [Homo sapiens]
           gi|19401874|gb|AAL87698.1|AF479827_1 protein kinase-like
           protein [Homo sapiens]
          Length = 778

 Score = 38.9 bits (89), Expect = 0.032
 Identities = 34/97 (35%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
 Frame = +1

Query: 205 SSSACFSCLNFPRDPNTYSYCVRP-LRQRAKGGGTPTSLQHPFPS-APRPRDLA--PSQP 372
           S+    S L+ PR P  +S+   P     A+GGG+PTS     PS  PR       P  P
Sbjct: 437 STGLSSSPLSSPRSP-VFSFSPEPGAGDEARGGGSPTSKTQTLPSRGPRGGGAGEQPPPP 495

Query: 373 TASASP*RGTRSRAASSAAQTL--PCTAPRAWARGTP 477
           +A ++P  G      SS    L  P   PRA   GTP
Sbjct: 496 SARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTP 532

>emb|CAD38950.1| hypothetical protein [Homo sapiens]
          Length = 768

 Score = 38.9 bits (89), Expect = 0.032
 Identities = 34/97 (35%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
 Frame = +1

Query: 205 SSSACFSCLNFPRDPNTYSYCVRP-LRQRAKGGGTPTSLQHPFPS-APRPRDLA--PSQP 372
           S+    S L+ PR P  +S+   P     A+GGG+PTS     PS  PR       P  P
Sbjct: 403 STGLSSSPLSSPRSP-VFSFSPEPGAGDEARGGGSPTSKTQTLPSRGPRGGGAGEQPPPP 461

Query: 373 TASASP*RGTRSRAASSAAQTL--PCTAPRAWARGTP 477
           +A ++P  G      SS    L  P   PRA   GTP
Sbjct: 462 SARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTP 498

>gb|AAH16681.1| KIAA1811 protein [Homo sapiens]
          Length = 473

 Score = 38.9 bits (89), Expect = 0.032
 Identities = 34/97 (35%), Positives = 43/97 (44%), Gaps = 6/97 (6%)
 Frame = +1

Query: 205 SSSACFSCLNFPRDPNTYSYCVRP-LRQRAKGGGTPTSLQHPFPS-APRPRDLA--PSQP 372
           S+    S L+ PR P  +S+   P     A+GGG+PTS     PS  PR       P  P
Sbjct: 132 STGLSSSPLSSPRSP-VFSFSPEPGAGDEARGGGSPTSKTQTLPSRGPRGGGAGEQPPPP 190

Query: 373 TASASP*RGTRSRAASSAAQTL--PCTAPRAWARGTP 477
           +A ++P  G      SS    L  P   PRA   GTP
Sbjct: 191 SARSTPLPGPPGSPRSSGGTPLHSPLHTPRASPTGTP 227



EST assemble image


clone accession position
1 CL53h07_r AV395986 1 480
2 LCL008a01_r AV626369 140 438




Chlamydomonas reinhardtii
Kazusa DNA Research Institute