Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000673A_C01 KCC000673A_c01
(725 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O65731|RS5_CICAR 40S RIBOSOMAL PROTEIN S5 gi|3043428|emb|CAA0... 325 3e-88
ref|NP_001000.2| ribosomal protein S5; 40S ribosomal protein S5 ... 325 6e-88
dbj|BAB62621.1| putative 40S ribosomal protein S5 [Oryza sativa ... 324 1e-87
ref|NP_181264.1| 40S ribosomal protein S5 (RPS5A) [Arabidopsis t... 323 1e-87
emb|CAA73041.1| 5S ribosomal protein [Mus musculus] gi|12832072|... 323 2e-87
>sp|O65731|RS5_CICAR 40S RIBOSOMAL PROTEIN S5 gi|3043428|emb|CAA06491.1| 40S ribosomal
protein S5 [Cicer arietinum]
Length = 197
Score = 325 bits (834), Expect = 3e-88
Identities = 161/190 (84%), Positives = 179/190 (93%), Gaps = 1/190 (0%)
Frame = +3
Query: 30 DVKLFGKWSFEDIEVTDISLEDYIAV-KTKYAVYVPHTAGRYQKRRFRKALCPIVERLCN 206
+VKLF +WSF+D++++D+SL DYI V +K+A YVPHTAGRY +RFRKA CPIVERL N
Sbjct: 8 EVKLFNRWSFDDVQLSDVSLIDYIGVVPSKHATYVPHTAGRYSVKRFRKAQCPIVERLTN 67
Query: 207 SLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVVVDAIINSGPREDATRIGSAGVV 386
SLMMHGRNNGKKLMAVRI+KHA +IIHLLTDQNPIQV+VDA++NSGPREDATRIGSAGVV
Sbjct: 68 SLMMHGRNNGKKLMAVRIIKHAMEIIHLLTDQNPIQVIVDAVVNSGPREDATRIGSAGVV 127
Query: 387 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKGSSNSYAIKKKD 566
RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIK+IAECLADEL+NAAKGSSNSYAIKKKD
Sbjct: 128 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKSIAECLADELINAAKGSSNSYAIKKKD 187
Query: 567 EIERVAKANR 596
EIERVAKANR
Sbjct: 188 EIERVAKANR 197
>ref|NP_001000.2| ribosomal protein S5; 40S ribosomal protein S5 [Homo sapiens]
gi|22002064|sp|P46782|RS5_HUMAN 40S ribosomal protein S5
gi|15929961|gb|AAH15405.1| Ribosomal protein S5 [Homo
sapiens] gi|17390334|gb|AAH18151.1| Ribosomal protein S5
[Homo sapiens] gi|17933051|dbj|BAB79493.1| ribosomal
protein S5 [Homo sapiens]
Length = 204
Score = 325 bits (832), Expect = 6e-88
Identities = 159/201 (79%), Positives = 181/201 (89%), Gaps = 5/201 (2%)
Frame = +3
Query: 9 WSTVA-----SPDVKLFGKWSFEDIEVTDISLEDYIAVKTKYAVYVPHTAGRYQKRRFRK 173
W T A +PD+KLFGKWS +D+++ DISL+DYIAVK KYA Y+PH+AGRY +RFRK
Sbjct: 4 WETAAPAVAETPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRK 63
Query: 174 ALCPIVERLCNSLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVVVDAIINSGPRE 353
A CPIVERL NS+MMHGRNNGKKLM VRIVKHAF+IIHLLT +NP+QV+V+AIINSGPRE
Sbjct: 64 AQCPIVERLTNSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPRE 123
Query: 354 DATRIGSAGVVRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKG 533
D+TRIG AG VRRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADEL+NAAKG
Sbjct: 124 DSTRIGRAGTVRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKG 183
Query: 534 SSNSYAIKKKDEIERVAKANR 596
SSNSYAIKKKDE+ERVAK+NR
Sbjct: 184 SSNSYAIKKKDELERVAKSNR 204
>dbj|BAB62621.1| putative 40S ribosomal protein S5 [Oryza sativa (japonica
cultivar-group)] gi|15408845|dbj|BAB64234.1| putative
40S ribosomal protein S5 [Oryza sativa (japonica
cultivar-group)]
Length = 200
Score = 324 bits (830), Expect = 1e-87
Identities = 163/189 (86%), Positives = 175/189 (92%), Gaps = 1/189 (0%)
Frame = +3
Query: 33 VKLFGKWSFEDIEVTDISLEDYIAVK-TKYAVYVPHTAGRYQKRRFRKALCPIVERLCNS 209
VKLF WSFED++V DISL DY+AV TK+A Y+PHTAGRY +RFRKA CP+VERL NS
Sbjct: 12 VKLFNCWSFEDVQVNDISLADYLAVSSTKHATYLPHTAGRYSAKRFRKAQCPLVERLTNS 71
Query: 210 LMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVVVDAIINSGPREDATRIGSAGVVR 389
LMMHGRNNGKK+MAVRIVKHA +IIHLLTD NPIQV+VDAIINSGPREDATRIGSAG VR
Sbjct: 72 LMMHGRNNGKKIMAVRIVKHAMEIIHLLTDANPIQVIVDAIINSGPREDATRIGSAGAVR 131
Query: 390 RQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKGSSNSYAIKKKDE 569
RQAVDISPLRRVNQAIYLLTTGARE+AFRNIKTIAECLADEL+NAAKGSSNSYAIKKKDE
Sbjct: 132 RQAVDISPLRRVNQAIYLLTTGARESAFRNIKTIAECLADELINAAKGSSNSYAIKKKDE 191
Query: 570 IERVAKANR 596
IERVAKANR
Sbjct: 192 IERVAKANR 200
>ref|NP_181264.1| 40S ribosomal protein S5 (RPS5A) [Arabidopsis thaliana]
gi|27734544|sp|Q9ZUT9|RS5A_ARATH 40S ribosomal protein
S5-1 gi|25294563|pir||F84790 40S ribosomal protein S5
[imported] - Arabidopsis thaliana
gi|4056502|gb|AAC98068.1| 40S ribosomal protein S5
[Arabidopsis thaliana] gi|16648959|gb|AAL24331.1| 40S
ribosomal protein S5 [Arabidopsis thaliana]
gi|20148681|gb|AAM10231.1| 40S ribosomal protein S5
[Arabidopsis thaliana]
Length = 207
Score = 323 bits (829), Expect = 1e-87
Identities = 162/190 (85%), Positives = 178/190 (93%), Gaps = 1/190 (0%)
Frame = +3
Query: 30 DVKLFGKWSFEDIEVTDISLEDYIAVK-TKYAVYVPHTAGRYQKRRFRKALCPIVERLCN 206
+VKLF +WSF+D+ VTDISL DYI V+ +K+A +VPHTAGRY +RFRKA CPIVERL N
Sbjct: 18 EVKLFNRWSFDDVSVTDISLVDYIGVQPSKHATFVPHTAGRYSVKRFRKAQCPIVERLTN 77
Query: 207 SLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVVVDAIINSGPREDATRIGSAGVV 386
SLMMHGRNNGKKLMAVRIVKHA +IIHLL+D NPIQV++DAI+NSGPREDATRIGSAGVV
Sbjct: 78 SLMMHGRNNGKKLMAVRIVKHAMEIIHLLSDLNPIQVIIDAIVNSGPREDATRIGSAGVV 137
Query: 387 RRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKGSSNSYAIKKKD 566
RRQAVDISPLRRVNQAI+LLTTGAREAAFRNIKTIAECLADEL+NAAKGSSNSYAIKKKD
Sbjct: 138 RRQAVDISPLRRVNQAIFLLTTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKKD 197
Query: 567 EIERVAKANR 596
EIERVAKANR
Sbjct: 198 EIERVAKANR 207
>emb|CAA73041.1| 5S ribosomal protein [Mus musculus] gi|12832072|dbj|BAB21953.1|
unnamed protein product [Mus musculus]
gi|12844596|dbj|BAB26424.1| unnamed protein product [Mus
musculus] gi|12846300|dbj|BAB27113.1| unnamed protein
product [Mus musculus] gi|12849157|dbj|BAB28229.1|
unnamed protein product [Mus musculus]
gi|12849255|dbj|BAB28270.1| unnamed protein product [Mus
musculus] gi|12861075|dbj|BAB32115.1| unnamed protein
product [Mus musculus] gi|12861440|dbj|BAB32203.1|
unnamed protein product [Mus musculus]
gi|26341360|dbj|BAC34342.1| unnamed protein product [Mus
musculus] gi|26341370|dbj|BAC34347.1| unnamed protein
product [Mus musculus] gi|35192941|gb|AAH58690.1|
Ribosomal protein S5 [Mus musculus]
Length = 204
Score = 323 bits (828), Expect = 2e-87
Identities = 156/191 (81%), Positives = 178/191 (92%)
Frame = +3
Query: 24 SPDVKLFGKWSFEDIEVTDISLEDYIAVKTKYAVYVPHTAGRYQKRRFRKALCPIVERLC 203
+PD+KLFGKWS +D+++ DISL+DYIAVK KYA Y+PH+AGRY +RFRKA CPIVERL
Sbjct: 14 TPDIKLFGKWSTDDVQINDISLQDYIAVKEKYAKYLPHSAGRYAAKRFRKAQCPIVERLT 73
Query: 204 NSLMMHGRNNGKKLMAVRIVKHAFDIIHLLTDQNPIQVVVDAIINSGPREDATRIGSAGV 383
NS+MMHGRNNGKKLM VRIVKHAF+IIHLLT +NP+QV+V+AIINSGPRED+TRIG AG
Sbjct: 74 NSMMMHGRNNGKKLMTVRIVKHAFEIIHLLTGENPLQVLVNAIINSGPREDSTRIGRAGT 133
Query: 384 VRRQAVDISPLRRVNQAIYLLTTGAREAAFRNIKTIAECLADELVNAAKGSSNSYAIKKK 563
VRRQAVD+SPLRRVNQAI+LL TGAREAAFRNIKTIAECLADEL+NAAKGSSNSYAIKKK
Sbjct: 134 VRRQAVDVSPLRRVNQAIWLLCTGAREAAFRNIKTIAECLADELINAAKGSSNSYAIKKK 193
Query: 564 DEIERVAKANR 596
DE+ERVAK+NR
Sbjct: 194 DELERVAKSNR 204
