KCC000662A_c03
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000662A_C03 KCC000662A_c03
GTGCATCGTTTCTCGCCTTTACAGTCGAGTACCAAGGTCCTCTGTGATCTCCAAGGCAAG
GAGCTCTTCCGTCGACTACAGCCATAAAAATGTCGGGCTTGAACAAGTTCATCTATGTGG
GCCTCGTTATCTCGGCAGCTGCTGACTCTGGCGGCCTACGTGGTCGTCACGGCCGGCGCT
GCCCGTTCTGCAGAAGAAGGCGAACACGCTCACTCTGTTTGACACCCAGCGAGGGCATTG
ACAAGTACACTCCCGTTTACAAGGAGGTCTTCACGGCGACCACCTACATCATCGCCTACC
CCCAGCAGCCCCAGTACCAGTTCCAGTACCAGTGGTGGATCATCCAGTTCGAGCTGTTTG
TGTTCCTGCTGACCGCCGCCTGGCACCGTCTTCCCCTCCATCATCAAGCGCATGCGCCCC
GTGGCCCTGACCTTCATCGCCTCCGCCCTGGTGCTGGTCATGGACAACATCAACGCCATC
TTCTTCCTGCTCCGCAACGAGACCGCCAAGGCTGTGTTCGACGACTACCGCATCGCCACC
GCTCAGGCTGGCCTGATCATGGTTGGCGTGGCGAACGGCCTGACCATCTTCTTCCTGGGC
TCGTACGACGCTGAGGAGTCGCATGCGATGCCCAACGTGCACGTCACCTCTGACGGCGCC
ACCAAGGTGTAAGCGGCGCAACTCACATCGCGTCGGCCGCTCCTTGCGGTTTTTGTACGA
GCGAATGGTGACCGCCGCTGCAAGGCGGTGCTGCAGCCGCCTGAGAGAGTAGATCAGACA
AGGTGCAAACATTTTTGAGAGACGCCTGTGAGATGAGATGACGTGGCTTTGCACACATGC
AAGCATCAAGTTTTATGTTATGTCTGGACTGTGTACGGTGTGTACACGTGATGTGGTTGG
TTGGGCAGCTGCATACGGGTCCCTCGCTCTTGGTGGCCCAGCAGTAAGCGTGACTGGGGT
GTGCCTGCGTGGTGCACCTGCGGGAACCGAAACACAATCTGATGTAGACTGCGCGGCAGC
TGCACCATCGTGCAGGGAGCGCAAGAATGTTTCCGTGCGTACGTGCCGCTTTTGAGGCGT
TGGGAAATGCGGGCCGTGGCTACGTTGCACGTGTGCTTGCAACAGAGCATGGCGTTGGTT
TACTGGCCGCTTCTGCTCATGTAGCCCGGATGGCACTCATCTGGGCGGGCGGATGATCGC
CAGATGTACATATACCCAGGTCCTGGGAATGATCAAACCTCGATTGGCTGTGTGAATGGT
CTGCTCTTCATGGACCTGTAACAAATCATGTGATG


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000662A_C03 KCC000662A_c03
         (1295 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

pir||T08066 probable membrane protein - Chlamydomonas reinhardti...   192  8e-48
ref|NP_872435.1| hypothetical protein FLJ35107 [Homo sapiens] gi...    40  5e-06
ref|XP_300853.1| hypothetical protein XP_300853 [Homo sapiens]         37  4e-05
ref|NP_560803.1| hypothetical protein [Pyrobaculum aerophilum] g...    49  3e-04
gb|AAQ82687.1| Epa5p [Candida glabrata]                                37  0.001

>pir||T08066 probable membrane protein - Chlamydomonas reinhardtii
           gi|1353354|gb|AAB01686.1| possible membrane protein
           [Chlamydomonas reinhardtii]
          Length = 192

 Score =  192 bits (489), Expect = 8e-48
 Identities = 114/178 (64%), Positives = 121/178 (67%)
 Frame = +1

Query: 136 QLLTLAAYVVVTAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRPPTSSPTPSSPS 315
           QLLTLAAYVVVTAGAA   ++  +  ++      +    P  +            P  P 
Sbjct: 16  QLLTLAAYVVVTAGAALLQKKA-NTLTLFDTQEGIDKYTPVYKEVFTATTYIIAYPQQPQ 74

Query: 316 TSSSTSGGSSSSSCLCSC*PPPGTVFPSIIKRMRPVALTFIASALVLVMDNINAIFFLLR 495
                                  TVFPSIIKRMRPVALTFIASALVLVMDNINAIFFLLR
Sbjct: 75  YQFQYQWWIIQFELFVFLLTAACTVFPSIIKRMRPVALTFIASALVLVMDNINAIFFLLR 134

Query: 496 NETAKAVFDDYRIATAQAGLIMVGVANGLTIFFLGSYDAEESHAMPNVHVTSDGATKV 669
           NETAKAVFDDYRIATAQAGLIMVGVANGLTIFFLGSYDAEESHAMPNVHVTSDGATKV
Sbjct: 135 NETAKAVFDDYRIATAQAGLIMVGVANGLTIFFLGSYDAEESHAMPNVHVTSDGATKV 192

 Score =  126 bits (316), Expect = 1e-27
 Identities = 68/97 (70%), Positives = 71/97 (73%)
 Frame = +3

Query: 90  MSGLNKFIYVGLVISAAADSGGLRGRHGRRCPFCRRRRTRSLCLTPSEGIDKYTPVYKEV 269
           MSGLNKFIYVGLVIS                   ++  T +L  T  EGIDKYTPVYKEV
Sbjct: 1   MSGLNKFIYVGLVISQLLTLAAYVVVTAGAALLQKKANTLTLFDT-QEGIDKYTPVYKEV 59

Query: 270 FTATTYIIAYPQQPQYQFQYQWWIIQFELFVFLLTAA 380
           FTATTYIIAYPQQPQYQFQYQWWIIQFELFVFLLTAA
Sbjct: 60  FTATTYIIAYPQQPQYQFQYQWWIIQFELFVFLLTAA 96

>ref|NP_872435.1| hypothetical protein FLJ35107 [Homo sapiens]
           gi|21751020|dbj|BAC03887.1| unnamed protein product
           [Homo sapiens] gi|33872427|gb|AAH16304.1| FLJ35107
           protein [Homo sapiens]
          Length = 258

 Score = 40.4 bits (93), Expect(2) = 5e-06
 Identities = 26/78 (33%), Positives = 42/78 (53%)
 Frame = +1

Query: 121 ASLSRQLLTLAAYVVVTAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRPPTSSPT 300
           +S SR +L+ +        ++ S+     +HS   P+ + +S+ P +  S+  P +SS +
Sbjct: 39  SSSSRSILSSSILSSSIPSSSSSSSSPSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSS 98

Query: 301 PSSPSTSSSTSGGSSSSS 354
            SS S SSS S  SSSSS
Sbjct: 99  SSSSSPSSSNSSSSSSSS 116

 Score = 35.4 bits (80), Expect(2) = 5e-05
 Identities = 28/82 (34%), Positives = 40/82 (48%)
 Frame = +2

Query: 389 SSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSATRPPRLCSTTTASPPLRLA*SWLA 568
           +S PSSS+ +P    SSP P      +S+PSSS S+T  P   S +++SP          
Sbjct: 184 NSSPSSSSSSPSSSSSSPSP-----RSSSPSSSSSSTSSPSTSSPSSSSPS--------- 229

Query: 569 WRTA*PSSSWARTTLRSRMRCP 634
             ++ PSSS     L  R + P
Sbjct: 230 --SSSPSSSCPSAALGRRPQSP 249

 Score = 35.0 bits (79), Expect(2) = 5e-05
 Identities = 21/62 (33%), Positives = 35/62 (55%)
 Frame = +1

Query: 169 TAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSS 348
           ++ ++ S+     + S   P+ + +S    +  SS  P +SS +PSS S+SSS+S  S S
Sbjct: 110 SSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPS 169

Query: 349 SS 354
           SS
Sbjct: 170 SS 171

 Score = 34.7 bits (78), Expect(2) = 0.002
 Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
 Frame = +1

Query: 226 PARALTSTLPFTRRSSRRPPTSSPT--PSSPSTSSSTSGGSSSSSCLCSC*PPPGT 387
           P+ + +S+ P +  SS  P +SS T  PSS S+SSS+S  SSS+S   S    P +
Sbjct: 65  PSSSHSSSSPSSSHSSSSPSSSSSTSSPSSSSSSSSSSSPSSSNSSSSSSSSSPSS 120

 Score = 34.3 bits (77), Expect = 4.9
 Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +1

Query: 169 TAGAARSAEEGEHAHSV*HPARALTSTLPFTRR-SSRRPPTSSPTPSSPSTSSSTSGGSS 345
           ++G++ S+     + S   P+ + +S  P +   SS    TSSP+ SSPS SSS S  S 
Sbjct: 175 SSGSSPSSSNSSPSSSSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPS-SSSPSSSSP 233

Query: 346 SSSC 357
           SSSC
Sbjct: 234 SSSC 237

 Score = 34.3 bits (77), Expect = 4.9
 Identities = 24/60 (40%), Positives = 32/60 (53%)
 Frame = +1

Query: 241 TSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSSSSCLCSC*PPPGTVFPSIIKRMRP 420
           +S+ P +  SS  P +SSP+ SS STSS ++   SSSS   S    P +  PS     RP
Sbjct: 190 SSSSPSSSSSSPSPRSSSPSSSSSSTSSPSTSSPSSSSPSSS---SPSSSCPSAALGRRP 246

 Score = 33.9 bits (76), Expect = 6.5
 Identities = 20/53 (37%), Positives = 29/53 (53%)
 Frame = +1

Query: 241 TSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSSSSCLCSC*PPPGTVFPS 399
           +S+ P +  SS    +SSP+ SSPS+S S+   S+SS    S  P   +  PS
Sbjct: 150 SSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPS 202

 Score = 33.5 bits (75), Expect(2) = 5e-06
 Identities = 31/100 (31%), Positives = 53/100 (53%)
 Frame = +2

Query: 365 PADRRLAPSSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSATRPPRLCSTTTASPPL 544
           P+    + SS PSSS+ +P    SS      S ++S+PSSS S+        ++++S P 
Sbjct: 136 PSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPS 195

Query: 545 RLA*SWLAWRTA*PSSSWARTTLRSRMRCPTCTSPLTAPP 664
             + S  + R++ PSSS + T+  S    P+ +SP ++ P
Sbjct: 196 SSS-SSPSPRSSSPSSSSSSTSSPS-TSSPSSSSPSSSSP 233

 Score = 30.0 bits (66), Expect(2) = 0.002
 Identities = 27/95 (28%), Positives = 44/95 (45%)
 Frame = +2

Query: 365 PADRRLAPSSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSATRPPRLCSTTTASPPL 544
           P+    +PSS  SSS+ +P    SSP       ++S+ SSS S++ P     +++ S P 
Sbjct: 129 PSSSSSSPSSSSSSSSSSPSSSSSSP-------SSSSSSSSSSSSSPSSSSPSSSGSSP- 180

Query: 545 RLA*SWLAWRTA*PSSSWARTTLRSRMRCPTCTSP 649
                  +   + PSSS +  +  S    P  +SP
Sbjct: 181 -------SSSNSSPSSSSSSPSSSSSSPSPRSSSP 208

>ref|XP_300853.1| hypothetical protein XP_300853 [Homo sapiens]
          Length = 252

 Score = 37.0 bits (84), Expect = 0.76
 Identities = 21/43 (48%), Positives = 27/43 (61%)
 Frame = +1

Query: 241 TSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSSSSCLCSC 369
           +S+ P +  SS  P +SSP+ SS STSS +S   SSSS   SC
Sbjct: 189 SSSSPSSSSSSPSPRSSSPSSSSSSTSSPSSSSPSSSSPSSSC 231

 Score = 37.0 bits (84), Expect(2) = 5e-04
 Identities = 21/39 (53%), Positives = 29/39 (73%)
 Frame = +1

Query: 238 LTSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSSSS 354
           L+S++P +  SS   P+SSP+ SSPS+S S+S  SSSSS
Sbjct: 51  LSSSIP-SSSSSSSSPSSSPSSSSPSSSHSSSSPSSSSS 88

 Score = 35.8 bits (81), Expect(2) = 4e-05
 Identities = 26/69 (37%), Positives = 36/69 (51%)
 Frame = +2

Query: 389 SSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSATRPPRLCSTTTASPPLRLA*SWLA 568
           +S PSSS+ +P    SSP P      +S+PSSS S+T  P   S +++SP      + L 
Sbjct: 183 NSSPSSSSSSPSSSSSSPSP-----RSSSPSSSSSSTSSPSSSSPSSSSPSSSCPSAALG 237

Query: 569 WRTA*PSSS 595
            R   P SS
Sbjct: 238 RRPQSPQSS 246

 Score = 35.0 bits (79), Expect(2) = 4e-05
 Identities = 21/62 (33%), Positives = 35/62 (55%)
 Frame = +1

Query: 169 TAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSS 348
           ++ ++ S+     + S   P+ + +S    +  SS  P +SS +PSS S+SSS+S  S S
Sbjct: 109 SSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSSSSPS 168

Query: 349 SS 354
           SS
Sbjct: 169 SS 170

 Score = 34.7 bits (78), Expect = 3.8
 Identities = 29/99 (29%), Positives = 49/99 (49%)
 Frame = +1

Query: 103 TSSSMWASLSRQLLTLAAYVVVTAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRP 282
           +SSS  + LS  +L+ +     ++ ++ S+     + S  H + + +S+   +  SS   
Sbjct: 38  SSSSSRSILSSSILSSSIPSSSSSSSSPSSSPSSSSPSSSHSSSSPSSSSSTSSPSSSSS 97

Query: 283 PTSSPTPSSPSTSSSTSGGSSSSSCLCSC*PPPGTVFPS 399
            +SS   SS S+SSS+S   SSSS   S  P   +  PS
Sbjct: 98  SSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPS 136

 Score = 33.9 bits (76), Expect = 6.5
 Identities = 20/53 (37%), Positives = 29/53 (53%)
 Frame = +1

Query: 241 TSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSSSSCLCSC*PPPGTVFPS 399
           +S+ P +  SS    +SSP+ SSPS+S S+   S+SS    S  P   +  PS
Sbjct: 149 SSSSPSSSSSSSSSSSSSPSSSSPSSSGSSPSSSNSSPSSSSSSPSSSSSSPS 201

 Score = 31.6 bits (70), Expect(2) = 7.6
 Identities = 22/70 (31%), Positives = 36/70 (51%)
 Frame = +1

Query: 169 TAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSS 348
           ++ ++ S+     + S   P+ + +S+      SS  P +SS + SS  +SSS+S  SSS
Sbjct: 98  SSSSSPSSSNSSSSSSSSSPSSSSSSSSSSPSSSSSSPSSSSSSSSSSPSSSSSSPSSSS 157

Query: 349 SSCLCSC*PP 378
           SS   S   P
Sbjct: 158 SSSSSSSSSP 167

 Score = 30.0 bits (66), Expect(2) = 5e-04
 Identities = 27/95 (28%), Positives = 44/95 (45%)
 Frame = +2

Query: 365 PADRRLAPSSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSATRPPRLCSTTTASPPL 544
           P+    +PSS  SSS+ +P    SSP       ++S+ SSS S++ P     +++ S P 
Sbjct: 128 PSSSSSSPSSSSSSSSSSPSSSSSSP-------SSSSSSSSSSSSSPSSSSPSSSGSSP- 179

Query: 545 RLA*SWLAWRTA*PSSSWARTTLRSRMRCPTCTSP 649
                  +   + PSSS +  +  S    P  +SP
Sbjct: 180 -------SSSNSSPSSSSSSPSSSSSSPSPRSSSP 207

 Score = 20.8 bits (42), Expect(2) = 7.6
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +2

Query: 365 PADRRLAPSSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCS 493
           P+    + SSP SSS  +  P  S P         S  SS C+
Sbjct: 207 PSSSSSSTSSPSSSSPSSSSPSSSCPSAALGRRPQSPQSSHCA 249

>ref|NP_560803.1| hypothetical protein [Pyrobaculum aerophilum]
           gi|18161723|gb|AAL64985.1| hypothetical protein
           [Pyrobaculum aerophilum str. IM2]
          Length = 533

 Score = 48.5 bits (114), Expect = 3e-04
 Identities = 33/88 (37%), Positives = 39/88 (43%), Gaps = 9/88 (10%)
 Frame = +2

Query: 302 PAAPVPVPVPVVDHPVRAVCVPADRRLAPSSPPS-SSACAPWP*PSS--------PPPWC 454
           P  P P P  V D P    C P D R  P  PPS + +  PWP  SS        PP   
Sbjct: 450 PPPPPPPPPNVTDDPPPPPCPPGDPRCTPPPPPSPAPSSGPWPTSSSWRRTRGRQPPGGA 509

Query: 455 WSWTTSTPSSSCSATRPPRLCSTTTASP 538
           W  TT + S SC+    PR C+ +  SP
Sbjct: 510 WRPTTPS-SPSCA----PRRCTRSRRSP 532

>gb|AAQ82687.1| Epa5p [Candida glabrata]
          Length = 1218

 Score = 37.4 bits (85), Expect(2) = 0.001
 Identities = 20/44 (45%), Positives = 27/44 (60%)
 Frame = +1

Query: 223 HPARALTSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSSSS 354
           +P R +   LP   +      +SSP+PSS S+SSS+S  SSSSS
Sbjct: 313 NPIRDVCEPLPTPSQDINSSSSSSPSPSSSSSSSSSSSSSSSSS 356

 Score = 35.4 bits (80), Expect = 2.2
 Identities = 29/95 (30%), Positives = 49/95 (51%)
 Frame = +1

Query: 103 TSSSMWASLSRQLLTLAAYVVVTAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRP 282
           +SSS  +S S    + ++    ++ ++ S+       S    + + +S+   +  SS   
Sbjct: 403 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSRSSSSSSSSSSSSSSSSSSSSSSSS 462

Query: 283 PTSSPTPSSPSTSSSTSGGSSSSSCLCSC*PPPGT 387
            +SSP+PSS S+SSS+S  SSSSS   S  P P +
Sbjct: 463 SSSSPSPSSSSSSSSSSSSSSSSSSSSS--PSPSS 495

 Score = 35.4 bits (80), Expect(2) = 0.12
 Identities = 28/94 (29%), Positives = 47/94 (49%)
 Frame = +1

Query: 106 SSSMWASLSRQLLTLAAYVVVTAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRPP 285
           SSS  +S S    + ++    ++ ++ S+     + S    + + +S+   +  SS  P 
Sbjct: 378 SSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPS 437

Query: 286 TSSPTPSSPSTSSSTSGGSSSSSCLCSC*PPPGT 387
            SS + SS S+SSS+S  SSSSS   S  P P +
Sbjct: 438 RSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSS 471

 Score = 35.4 bits (80), Expect = 2.2
 Identities = 32/99 (32%), Positives = 49/99 (49%)
 Frame = +1

Query: 103 TSSSMWASLSRQLLTLAAYVVVTAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRP 282
           +SSS   S SR   + ++    ++ ++ S+     + S   P+ + +S+      SS   
Sbjct: 428 SSSSSSPSPSRSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSS------SSSSS 481

Query: 283 PTSSPTPSSPSTSSSTSGGSSSSSCLCSC*PPPGTVFPS 399
            +SS + SSPS SSS+S  SSSSS   S  P    V PS
Sbjct: 482 SSSSSSSSSPSPSSSSSSSSSSSSSSPSIQPSSKPVDPS 520

 Score = 34.3 bits (77), Expect(2) = 0.42
 Identities = 18/29 (62%), Positives = 22/29 (75%)
 Frame = +1

Query: 268 SSRRPPTSSPTPSSPSTSSSTSGGSSSSS 354
           SS    +SSP+PSS S+SSS+S  SSSSS
Sbjct: 366 SSSSSSSSSPSPSSSSSSSSSSSSSSSSS 394

 Score = 33.9 bits (76), Expect(2) = 0.70
 Identities = 20/40 (50%), Positives = 24/40 (60%)
 Frame = +1

Query: 268 SSRRPPTSSPTPSSPSTSSSTSGGSSSSSCLCSC*PPPGT 387
           SS    +SS + SSPS SSS+S  SSSSS   S  P P +
Sbjct: 361 SSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSPSPSS 400

 Score = 33.5 bits (75), Expect(2) = 0.54
 Identities = 21/62 (33%), Positives = 34/62 (53%)
 Frame = +1

Query: 169 TAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSS 348
           ++ ++ S+     + S    + + +S  P +  SS    +SS + SSPS SSS+S  SSS
Sbjct: 349 SSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSS 408

Query: 349 SS 354
           SS
Sbjct: 409 SS 410

 Score = 33.1 bits (74), Expect(2) = 0.043
 Identities = 20/62 (32%), Positives = 35/62 (56%)
 Frame = +1

Query: 169 TAGAARSAEEGEHAHSV*HPARALTSTLPFTRRSSRRPPTSSPTPSSPSTSSSTSGGSSS 348
           ++ ++ S+     + S   P+ + +S+   +  SS   P+ S + SS S+SSS+S  SSS
Sbjct: 358 SSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSS 417

Query: 349 SS 354
           SS
Sbjct: 418 SS 419

 Score = 28.5 bits (62), Expect(2) = 0.001
 Identities = 25/86 (29%), Positives = 45/86 (52%)
 Frame = +2

Query: 389 SSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSATRPPRLCSTTTASPPLRLA*SWLA 568
           SS  SSS+ +P P  SS      S ++S+ SSS S++      S++++  P R + S  +
Sbjct: 386 SSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSRSSSSSSS 445

Query: 569 WRTA*PSSSWARTTLRSRMRCPTCTS 646
             ++  SSS + ++  S    P+ +S
Sbjct: 446 SSSSSSSSSSSSSSSSSSSSSPSPSS 471

 Score = 26.9 bits (58), Expect(2) = 0.043
 Identities = 18/49 (36%), Positives = 28/49 (56%)
 Frame = +2

Query: 389 SSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSATRPPRLCSTTTAS 535
           SS  SSS+ +  P PSS      S ++S+ SSS S+  P    S++++S
Sbjct: 455 SSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSS 503

 Score = 23.1 bits (48), Expect(2) = 0.12
 Identities = 15/39 (38%), Positives = 22/39 (55%)
 Frame = +2

Query: 389 SSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSATRP 505
           SS  SSS+ +     SSP P   S ++S+ SSS  + +P
Sbjct: 474 SSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSPSIQP 512

 Score = 22.7 bits (47), Expect(2) = 0.54
 Identities = 15/37 (40%), Positives = 22/37 (58%)
 Frame = +2

Query: 389 SSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSAT 499
           SS  SSS+ +     SSP P   S ++S+ SSS S++
Sbjct: 450 SSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSS 486

 Score = 22.3 bits (46), Expect(2) = 0.42
 Identities = 16/51 (31%), Positives = 28/51 (54%)
 Frame = +2

Query: 383 APSSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSATRPPRLCSTTTAS 535
           +PS   SSS+ +     SS      S ++S+ SSS S++  P   S++++S
Sbjct: 395 SPSPSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSRSSSSSSS 445

 Score = 21.9 bits (45), Expect(2) = 0.70
 Identities = 17/58 (29%), Positives = 29/58 (49%)
 Frame = +2

Query: 365 PADRRLAPSSPPSSSACAPWP*PSSPPPWCWSWTTSTPSSSCSATRPPRLCSTTTASP 538
           P+  R + SS  SSS+ +     SS      S  + + SSS S++      S++++SP
Sbjct: 434 PSPSRSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPSSSSSSSSSSSSSSSSSSSSSP 491



EST assemble image


clone accession position
1 MX224g07_r BP090495 1 429
2 MX044b06_r BP087818 12 485
3 LC052f07_r AV622661 21 633
4 LC014g03_r AV619901 23 617
5 LC014c08_r AV619868 25 617
6 LC045h04_r AV622303 28 629
7 LC001h07_r AV618960 109 652
8 MX223g05_r BP090425 111 427
9 MX224a02_r BP090444 111 417
10 LCL089c09_r AV631131 111 626
11 LCL067g08_r AV629859 111 587
12 LC029d09_r AV620974 112 677
13 LC024d05_r AV620614 112 685
14 LC026b12_r AV620739 112 652
15 LC011c08_r AV619650 112 699
16 LCL092b09_r AV631334 112 570
17 LC047f07_r AV622068 112 529
18 LC089c10_r AV625209 112 655
19 LC030b05_r AV621027 113 696
20 LC031c05_r AV621102 113 716
21 LC052h05_r AV622677 114 499
22 LC018b01_r AV620138 114 644
23 LC095g02_r AV625634 115 577
24 MX246b11_r BP091913 116 301
25 MX235g02_r BP091231 118 450
26 LC092h09_r AV625460 119 474
27 MX255g04_r BP092546 120 387
28 MX231a05_r BP090920 120 426
29 LC014f09_r AV619896 121 715
30 LC035e05_r AV621398 123 336
31 LC063c02_r AV623400 123 638
32 LC042c10_r AV621894 123 584
33 LC010a08_r AV619562 123 559
34 LC032f11_r AV621206 123 678
35 MX053f01_r BP088186 123 462
36 LC066f06_r AV623639 123 676
37 LC003e11_r AV619086 123 677
38 LC003g07_r AV619100 123 666
39 LC020b04_r AV620289 123 656
40 LC013f05_r AV619819 123 680
41 LC080f08_r AV624645 123 676
42 LC040d04_r AV621742 123 655
43 LC059a06_r AV623107 123 654
44 LC073h05_r AV624168 123 671
45 LC069a03_r AV623811 123 652
46 LC051g10_r AV622602 123 671
47 LC088d05_r AV625139 123 651
48 LC007g12_r AV619397 123 672
49 LC013b02_r AV619782 123 652
50 LC056d11_r AV622910 123 652
51 LCL020e10_r AV627066 123 673
52 LC081b07_r AV624680 123 650
53 LC048d02_r AV622338 123 649
54 MX037g07_r BP087576 123 651
55 LC032g03_r AV621208 123 648
56 LC052c07_r AV622637 123 650
57 LC090f09_r AV625304 123 675
58 LC029h08_r AV621011 123 674
59 LCL038b05_r AV628194 123 302
60 LC084h09_r AV624948 123 677
61 LC035a09_r AV621366 123 679
62 MX004f11_r BP086232 123 377
63 LC059c03_r AV623123 123 644
64 LC056c10_r AV622901 123 680
65 LC049h05_r AV622447 123 684
66 LC016c06_r AV620013 123 685
67 LC005c04_r AV619213 123 706
68 LC073b05_r AV624114 123 639
69 LC068a10_r AV623742 123 638
70 LC037c05_r AV621524 123 641
71 LC067a03_r AV623665 123 710
72 LC013f11_r AV619824 123 694
73 LC005g01_r AV619252 123 629
74 MX003e12_r BP086187 123 621
75 LC038b07_r AV621590 123 695
76 LC072h12_r AV624100 123 619
77 MX055h08_r BP088274 123 489
78 LC013h12_r AV619844 123 713
79 MX055c06_r BP088247 123 493
80 LC049c02_r AV622403 123 616
81 MX044b09_r BP087819 123 502
82 LC090e07_r AV625293 123 634
83 MX039e09_r BP087626 123 610
84 LC089e05_r AV625223 123 437
85 MX038g01_r BP087605 123 506
86 MX002e06_r BP086132 123 601
87 MX029a05_r BP087250 123 517
88 MX036g07_r BP087538 123 526
89 LC003a04_r AV619042 123 677
90 LC052a01_r AV622615 123 641
91 MX009f06_r BP086474 123 527
92 LC077e06_r AV624420 123 636
93 MX026c10_r BP087133 123 596
94 LC035f05_r AV621406 123 486
95 LC078e08_r AV624498 123 540
96 LC075e07_r AV624282 123 540
97 LC035f12_r AV621410 123 595
98 MX026h05_r BP087156 123 594
99 LC023a06_r AV620504 123 591
100 LC070f08_r AV623935 123 589
101 MX032b09_r BP087337 123 543
102 LC070d10_r AV623914 123 584
103 MX028e05_r BP087230 123 545
104 MX016c01_r BP086762 123 546
105 LC072a02_r AV624031 123 579
106 LC088a08_r AV625112 123 572
107 LC097b02_r AV625730 123 570
108 MX009h02_r BP086481 123 458
109 MX007c03_r BP086359 123 550
110 MX041c02_r BP087679 123 459
111 LC097g08_r AV625783 123 567
112 LCL073g04_r AV630133 123 565
113 LC062h07_r AV623379 123 643
114 LC007h10_r AV619406 123 715
115 LC092d01_r AV625425 123 564
116 MX015e05_r BP086731 123 556
117 LC049c10_r AV622410 123 672
118 MX056b10_r BP088278 123 482
119 LC027a11_r AV620803 123 559
120 MX010h05_r BP086533 123 476
121 MX260e08_r BP092894 124 620
122 MX232b01_r BP090984 124 572
123 MX246b10_r BP091912 124 709
124 MX256a01_r BP092562 124 638
125 LC042e04_r AV621910 132 710
126 CM054g08_r AV390012 132 347
127 LCL076a06_r AV630244 135 570
128 LC006f06_r AV619323 137 715
129 LC060e01_r AV623210 137 684
130 LC006g06_r AV619331 139 760
131 LC019h08_r AV620273 150 713
132 LCL040b02_r AV628323 157 683
133 LC059e12_r AV623148 169 741
134 LCL078b10_r AV630393 192 482
135 LC034b02_r AV621301 217 762
136 LC029a07_r AV620948 217 778
137 LC095e03_r AV625615 217 699
138 LC081g02_r AV624724 218 754
139 LC075d02_r AV624270 235 766
140 LC032f05_r AV621201 241 717
141 LC096f08_r AV625701 243 679
142 LC046d11_r AV622197 250 772
143 LC018e06_r AV620168 250 803
144 LC079e12_r AV624574 250 684
145 LC070b12_r AV623900 250 766
146 MX013d09_r BP086638 250 672
147 LC095e05_r AV625617 255 618
148 MX011d02_r BP086553 261 786
149 LC049e04_r AV622423 261 780
150 LC028f03_r AV620919 261 796
151 LC088d01_r AV625135 272 804
152 LC082f07_r AV624783 293 839
153 LC063e04_r AV623416 314 784
154 LC012a12_r AV619710 318 845
155 MX018h04_r BP086862 353 753
156 MX028h08_r BP087246 356 825
157 LC005h11_r AV619271 358 830
158 LC063h11_r AV623450 368 901
159 LC043c05_r AV621964 374 863
160 LC094c10_r AV625539 379 799
161 LC074a02_r AV624174 480 1011
162 MX005g12_r BP086287 498 971
163 LC010d04_r AV619584 498 1074
164 LCL057e12_r AV629373 932 1445
165 LC082a03_r AV624741 949 1469
166 LC036b06_r AV621437 954 1491
167 LC082b01_r AV624748 962 1445
168 LC071g01_r AV624748 990 1380
169 LC045e03_r AV622277 1060 1521
170 LC099a11_r AV625865 1204 1485




Chlamydomonas reinhardtii
Kazusa DNA Research Institute