Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000661A_C01 KCC000661A_c01
(585 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAK53449.1| unknown [Streptomyces aureofaciens] 37 0.013
gb|AAH11657.2| Unknown (protein for IMAGE:4124268) [Homo sapiens] 40 0.031
emb|CAA70019.1| SF1-Bo isoform [Homo sapiens] 40 0.031
ref|NP_004621.1| splicing factor 1; zinc finger protein 162 [Hom... 40 0.031
ref|NP_035880.1| zinc finger protein 162 [Mus musculus] gi|21432... 40 0.031
>gb|AAK53449.1| unknown [Streptomyces aureofaciens]
Length = 579
Score = 37.4 bits (85), Expect(2) = 0.013
Identities = 29/84 (34%), Positives = 34/84 (39%), Gaps = 3/84 (3%)
Frame = -3
Query: 574 CRANGLA--WPRN-CNATAPRLATPRAPCSHQQPSAVTAHGPACASTRYGSTCWPQAPHR 404
CR G+ P N A P + A H +P A GP A TR ST
Sbjct: 372 CRGAGVEPEGPANGAGAGRPTATSGYARPQHARPPARAPPGPRPAPTRAAST-------- 423
Query: 403 HRPPPMRNPGRP*DPPRRPSAPTP 332
P R RP PP RP+AP+P
Sbjct: 424 ----PARTGSRPASPPTRPTAPSP 443
Score = 32.0 bits (71), Expect = 6.5
Identities = 22/71 (30%), Positives = 27/71 (37%), Gaps = 6/71 (8%)
Frame = -3
Query: 526 PRLATPRAPCSHQQPSAVTAHGPACASTRYGSTCWPQAP------HRHRPPPMRNPGRP* 365
P TP P + + P+A P+ G+ P R RPPP R P
Sbjct: 462 PPPPTPPVPRARRGPAAGNGRPPSTRDRTAGTRAPASPPGAPPPVRRRRPPPPRAP---- 517
Query: 364 DPPRRPSAPTP 332
PP PSA P
Sbjct: 518 -PPHHPSARNP 527
Score = 22.7 bits (47), Expect(2) = 0.013
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -1
Query: 312 RKLAPYPCPSHPPIHLAWPIVA*QQAPAHTTVV 214
R AP P P+ PP A P A + P T V
Sbjct: 437 RPTAPSPAPAAPPRAAAAPTPARRPPPPPTPPV 469
>gb|AAH11657.2| Unknown (protein for IMAGE:4124268) [Homo sapiens]
Length = 527
Score = 39.7 bits (91), Expect = 0.031
Identities = 36/129 (27%), Positives = 41/129 (30%), Gaps = 15/129 (11%)
Frame = -3
Query: 544 NCNATAPRLATPRAPCSHQQPSAVTAHGPACASTRYGST--------------CWPQAPH 407
N N P P P +Q P HGP GST P P
Sbjct: 304 NPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM 363
Query: 406 RHRPPPMRNP-GRP*DPPRRPSAPTPWLLQDYT*TSPLPLSITPSYPLGLAHRRLTTSAC 230
PPP P G+P PP P P Q P S+ S PL TT+
Sbjct: 364 GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTS 423
Query: 229 THHGCVGPW 203
G + PW
Sbjct: 424 AGTGSIPPW 432
>emb|CAA70019.1| SF1-Bo isoform [Homo sapiens]
Length = 638
Score = 39.7 bits (91), Expect = 0.031
Identities = 36/129 (27%), Positives = 41/129 (30%), Gaps = 15/129 (11%)
Frame = -3
Query: 544 NCNATAPRLATPRAPCSHQQPSAVTAHGPACASTRYGST--------------CWPQAPH 407
N N P P P +Q P HGP GST P P
Sbjct: 416 NPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM 475
Query: 406 RHRPPPMRNP-GRP*DPPRRPSAPTPWLLQDYT*TSPLPLSITPSYPLGLAHRRLTTSAC 230
PPP P G+P PP P P Q P S+ S PL TT+
Sbjct: 476 GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTS 535
Query: 229 THHGCVGPW 203
G + PW
Sbjct: 536 AGTGSIPPW 544
>ref|NP_004621.1| splicing factor 1; zinc finger protein 162 [Homo sapiens]
gi|785997|dbj|BAA05117.1| ZFM1 protein [Homo sapiens]
Length = 623
Score = 39.7 bits (91), Expect = 0.031
Identities = 36/129 (27%), Positives = 41/129 (30%), Gaps = 15/129 (11%)
Frame = -3
Query: 544 NCNATAPRLATPRAPCSHQQPSAVTAHGPACASTRYGST--------------CWPQAPH 407
N N P P P +Q P HGP GST P P
Sbjct: 416 NPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM 475
Query: 406 RHRPPPMRNP-GRP*DPPRRPSAPTPWLLQDYT*TSPLPLSITPSYPLGLAHRRLTTSAC 230
PPP P G+P PP P P Q P S+ S PL TT+
Sbjct: 476 GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTS 535
Query: 229 THHGCVGPW 203
G + PW
Sbjct: 536 AGTGSIPPW 544
>ref|NP_035880.1| zinc finger protein 162 [Mus musculus] gi|2143272|emb|CAA73359.1|
CW17 [Mus musculus]
Length = 653
Score = 39.7 bits (91), Expect = 0.031
Identities = 36/129 (27%), Positives = 41/129 (30%), Gaps = 15/129 (11%)
Frame = -3
Query: 544 NCNATAPRLATPRAPCSHQQPSAVTAHGPACASTRYGST--------------CWPQAPH 407
N N P P P +Q P HGP GST P P
Sbjct: 416 NPNGPPPPWMQPPPPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPM 475
Query: 406 RHRPPPMRNP-GRP*DPPRRPSAPTPWLLQDYT*TSPLPLSITPSYPLGLAHRRLTTSAC 230
PPP P G+P PP P P Q P S+ S PL TT+
Sbjct: 476 GMMPPPPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTS 535
Query: 229 THHGCVGPW 203
G + PW
Sbjct: 536 AGTGSIPPW 544
