KCC000657A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000657A_C01 KCC000657A_c01
CTGCTACCTATATTCACCAAAATAATAATATCGCAGTTGCTGTCCACGCTGCTGTCGGCA
CGGAACTGAGTATCTACTCCCCGAGTCTGAGACCCGAGCTGTCTCCGCAACTTCGTTTGT
GGATAGCTTAGGGATATGAGCTCCTCCCTTCGCCTCCAACAATGCGGGAGACCGGGGCTT
CGAACCCGGTCGACCCCCCAGCCGGTCCTCCTTCGGCCCCACTTGCCGCGCCCCCGCATA
CGCCTGCGCCTGCGTGTCCAAGCGACCGCAGCTGGAATATCCCTCCCGCCCCCATCGAGC
GGCAGCGACAGCAACGTATATCAACGGATGGCGTCCTTTCCCCGCACATCCGTCAACTGG
TGGAAAGTTGAATCTCCCGCGAAAGGC


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000657A_C01 KCC000657A_c01
         (387 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (...    44  7e-04
ref|NP_177036.1| protein kinase family [Arabidopsis thaliana] gi...    44  7e-04
gb|AAA85515.1| Wiscott-Aldrich Syndrome protein homolog                44  7e-04
ref|NP_033541.1| Wiskott-Aldrich syndrome homolog; Wiskott-Aldri...    44  7e-04
dbj|BAB62550.1| OSJNBa0089K24.5 [Oryza sativa (japonica cultivar...    43  0.001

>sp|Q9FPQ6|GP1_CHLRE Vegetative cell wall protein gp1 precursor (Hydroxyproline-rich
           glycoprotein 1) gi|12018147|gb|AAG45420.1|AF309494_1
           vegetative cell wall protein gp1 [Chlamydomonas
           reinhardtii]
          Length = 555

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 22/50 (44%), Positives = 27/50 (54%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAPI 296
           P PP+      + PV P   PPS P  APP  P+PA PS  S   PP+P+
Sbjct: 197 PVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPSPAPPSP-SPPAPPSPV 245

 Score = 39.7 bits (91), Expect = 0.010
 Identities = 20/49 (40%), Positives = 25/49 (50%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+       +P  P   PP  P  APP  P+PA PS  S   PP+P
Sbjct: 189 PAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPSPAPPSPPS-PAPPSP 236

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P PP  R    +N   PP+ P   P  APP  P P  PS  S  +PP+P
Sbjct: 271 PPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPS-PVPPSP 318

 Score = 38.5 bits (88), Expect = 0.023
 Identities = 20/49 (40%), Positives = 26/49 (52%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+       +P  P    PS P  APP  P+PA PS  S  +PP+P
Sbjct: 116 PAPPSPPSPAPPSPSPPAPPSPSPPSPAPPLPPSPAPPSP-SPPVPPSP 163

 Score = 37.7 bits (86), Expect = 0.039
 Identities = 20/53 (37%), Positives = 26/53 (48%), Gaps = 4/53 (7%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPS----DRSWNIPPAP 293
           PSPP+       +P  P   PP  P  +PP  P+PA PS      S  +PP+P
Sbjct: 137 PSPPSPAPPLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSP 189

 Score = 37.7 bits (86), Expect = 0.039
 Identities = 20/51 (39%), Positives = 25/51 (48%), Gaps = 2/51 (3%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHT--PAPACPSDRSWNIPPAP 293
           PSPP+       +P  P   PP+ P   PP    P+PA PS +    PPAP
Sbjct: 218 PSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPK----PPAP 264

 Score = 37.7 bits (86), Expect = 0.039
 Identities = 20/49 (40%), Positives = 24/49 (48%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           PSPP        +P  P    P+ P  APP  P+PA PS  S   PP+P
Sbjct: 181 PSPPVPPSPAPPSPAPPVPPSPAPPSPAPPVPPSPAPPSPPS-PAPPSP 228

 Score = 37.7 bits (86), Expect = 0.039
 Identities = 21/49 (42%), Positives = 26/49 (52%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+      S PV P   PPS    APP  P+PA PS     +PP+P
Sbjct: 171 PAPPSPTPPSPSPPVPPSPAPPSP---APPVPPSPAPPSPAP-PVPPSP 215

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 18/49 (36%), Positives = 24/49 (48%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+       +P  P   PP  P  APP +PAP  P   +   PP+P
Sbjct: 176 PTPPSPSPPVPPSPAPPSPAPPVPPSPAPP-SPAPPVPPSPAPPSPPSP 223

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           PSPP        +P  P   PP  P  APP +PAP  P   +   PP+P
Sbjct: 163 PSPPVPPSPAPPSPTPPSPSPPVPPSPAPP-SPAPPVPPSPA---PPSP 207

 Score = 35.4 bits (80), Expect = 0.20
 Identities = 22/51 (43%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSA--PLAAPPHTPAPACPSDRSWNIPPAP 293
           PSPP       S PV P   PPS   P  +PP  P+PA PS     +PP+P
Sbjct: 155 PSPPV--PPSPSPPVPPSPAPPSPTPPSPSPPVPPSPAPPSPAP-PVPPSP 202

 Score = 35.0 bits (79), Expect = 0.26
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGP------PSAPLAAPPHTPAPACPS 263
           P+PPT       +PV P   P      P +P  +PP +PAP  PS
Sbjct: 300 PTPPTPPSPSPPSPVPPSPAPVPPSPAPPSPAPSPPPSPAPPTPS 344

 Score = 35.0 bits (79), Expect = 0.26
 Identities = 17/49 (34%), Positives = 25/49 (50%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+       +P  P   PP+ P  +PP +PAP  P   +   PP+P
Sbjct: 111 PAPPSPAPPSPPSPAPPSPSPPAPPSPSPP-SPAPPLPPSPA---PPSP 155

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 21/51 (41%), Positives = 22/51 (42%), Gaps = 2/51 (3%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSA--PLAAPPHTPAPACPSDRSWNIPPAP 293
           PSPP+      S P  P   PPS   P  APP    PA P   S   PP P
Sbjct: 226 PSPPSPAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPP 276

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 18/49 (36%), Positives = 23/49 (46%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P PP+      + PV P   PPS     PP +PAP  P   +   PP+P
Sbjct: 184 PVPPSPAPPSPAPPVPPSPAPPSPAPPVPP-SPAPPSPPSPAPPSPPSP 231

 Score = 34.3 bits (77), Expect = 0.44
 Identities = 19/49 (38%), Positives = 23/49 (46%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+       +P  P   PPS P  APP    PA PS      PP+P
Sbjct: 101 PAPPS---PAPPSPAPPSPAPPSPPSPAPPSPSPPAPPSPS----PPSP 142

 Score = 33.9 bits (76), Expect = 0.57
 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 11/61 (18%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAP-----------LAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+ +      P  PP  PP  P             +PP +PAP  P       PP+P
Sbjct: 254 PAPPSPKPPAPPPPPSPPPPPPPRPPFPANTPMPPSPPSPPPSPAPPTPPTPPSPSPPSP 313

Query: 294 I 296
           +
Sbjct: 314 V 314

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 19/55 (34%), Positives = 26/55 (46%), Gaps = 6/55 (10%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPS------APLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+       +P  P   PPS      AP +  P +PAP  P+  S   PP+P
Sbjct: 73  PAPPSPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPAPPS---PPSP 124

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P PP+      + P   P  PP  P   PP  P P  P++    +PP+P
Sbjct: 244 PVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFPANTP--MPPSP 290

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 20/49 (40%), Positives = 25/49 (50%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+       +P  P  GPPS    APP  P+PA PS      PP+P
Sbjct: 53  PAPPS---PAPPSPAPPSPGPPSP---APPSPPSPAPPSP----APPSP 91

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 20/49 (40%), Positives = 26/49 (52%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+       +P  P   PPS P  APP +PAP  P+  S   PP+P
Sbjct: 58  PAPPS---PAPPSPGPPSPAPPSPPSPAPP-SPAPPSPAPPS-PAPPSP 101

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 16/49 (32%), Positives = 23/49 (46%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           PSPP        +P  P    P+ P  +PP  P+P+ P      +PP+P
Sbjct: 129 PSPPAPPSPSPPSPAPPLPPSPAPPSPSPPVPPSPSPP------VPPSP 171

 Score = 33.1 bits (74), Expect = 0.97
 Identities = 18/49 (36%), Positives = 20/49 (40%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           PSPP        +P  P   PPS    APP  P+P  P       PP P
Sbjct: 236 PSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPP------PPRP 278

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 18/51 (35%), Positives = 21/51 (40%), Gaps = 2/51 (3%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSA--PLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+       +PV P   PPS   P   PP  P P  P       PP P
Sbjct: 231 PAPPSPSPPAPPSPVPPSPAPPSPAPPSPKPPAPPPPPSPPPPPPPRPPFP 281

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P PP+       +P  P    P+ P  +PP  P+P  PS      PP+P
Sbjct: 210 PVPPSPAPPSPPSPAPPSPPSPAPPSPSPPAPPSPVPPSP----APPSP 254

 Score = 32.3 bits (72), Expect = 1.7
 Identities = 19/49 (38%), Positives = 25/49 (50%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           PSPP+   + A  P  PP  P  +P +  P +PAP  PS      PP+P
Sbjct: 288 PSPPSPPPSPA--PPTPPTPPSPSPPSPVPPSPAPVPPSP----APPSP 330

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+      + P+ P   PPS     PP +P+P  P   +   PP+P
Sbjct: 132 PAPPSPSPPSPAPPLPPSPAPPSPSPPVPP-SPSPPVPPSPA---PPSP 176

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 18/53 (33%), Positives = 24/53 (44%), Gaps = 4/53 (7%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPP----SAPLAAPPHTPAPACPSDRSWNIPPAP 293
           P PP+      S PV P   PP     AP +  P +P+P  P   +   PP+P
Sbjct: 145 PLPPSPAPPSPSPPVPPSPSPPVPPSPAPPSPTPPSPSPPVPPSPA---PPSP 194

 Score = 30.0 bits (66), Expect = 8.2
 Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPS-APLAAPPHTPAPACPSDRSWNIPPAP 293
           P+PP+       +P  P   PPS AP +  P +PAP  P   +   PP+P
Sbjct: 86  PAPPS---PAPPSPAPPSPAPPSPAPPSPAPPSPAPPSPPSPA---PPSP 129

>ref|NP_177036.1| protein kinase family [Arabidopsis thaliana]
           gi|25404764|pir||D96711 hypothetical protein F24J5.8
           [imported] - Arabidopsis thaliana
           gi|5734709|gb|AAD49974.1|AC008075_7 Contains PF|00069
           Eukaryotic protein kinase domain. [Arabidopsis thaliana]
           gi|14334806|gb|AAK59581.1| putative protein kinase
           [Arabidopsis thaliana] gi|21280865|gb|AAM44925.1|
           putative protein kinase [Arabidopsis thaliana]
          Length = 708

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 29/90 (32%), Positives = 37/90 (40%), Gaps = 12/90 (13%)
 Frame = +3

Query: 81  PSLRPELSPQLRLWIA*GYELLPSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPA---- 248
           PS+RP  SP             P PP+ R T +  P  PP+ P   P  +PP  P+    
Sbjct: 147 PSVRPIQSP-------------PPPPSDRPTQSPPPPSPPSPPSERPTQSPPSPPSERPT 193

Query: 249 --------PACPSDRSWNIPPAPIERQRQQ 314
                   P+ PSDR    PP P E  + Q
Sbjct: 194 QSPPPPSPPSPPSDRPSQSPPPPPEDTKPQ 223

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 26/72 (36%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = +3

Query: 81  PSLRPELSPQLRLWIA*GYELLPSPPTMRETGAS---NPVDPPAGPPSAPLAAPPHTPAP 251
           PS RP  SP             PSPP+ R T +    +P  PP+  PS     PP    P
Sbjct: 176 PSERPTQSP-------------PSPPSERPTQSPPPPSPPSPPSDRPSQSPPPPPEDTKP 222

Query: 252 ACPSDRSWNIPP 287
             P  RS N PP
Sbjct: 223 Q-PPRRSPNSPP 233

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 25/83 (30%), Positives = 32/83 (38%), Gaps = 12/83 (14%)
 Frame = +3

Query: 81  PSLRPELSPQLRLWIA*GYELLPSPPTMRETGASNPVDPPAGPPSAPLAAPP---HTPAP 251
           PS  P  SP  +  I         PP +     S+P  P + PP  P  +PP    +P P
Sbjct: 88  PSPPPSTSPPPQPVIPSPPPSASPPPALVPPLPSSPPPPASVPPPRPSPSPPILVRSPPP 147

Query: 252 AC---------PSDRSWNIPPAP 293
           +          PSDR    PP P
Sbjct: 148 SVRPIQSPPPPPSDRPTQSPPPP 170

>gb|AAA85515.1| Wiscott-Aldrich Syndrome protein homolog
          Length = 520

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 28/78 (35%), Positives = 32/78 (40%), Gaps = 5/78 (6%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPP---AGPPSAPLAAPPHTPAPACPSD--RSWNIPPAPIERQRQ 311
           P PP    TG S P  PP   AG P AP   PP  P P CP        +PP P+     
Sbjct: 384 PPPPPPPATGRSGPPPPPLPGAGGPPAPPPPPPPPPPPPCPGSGPAPPPLPPTPVSGGSP 443

Query: 312 QRISTDGVLSPHIRQLVE 365
                 G L   IRQ ++
Sbjct: 444 APGGGRGALLDQIRQGIQ 461

>ref|NP_033541.1| Wiskott-Aldrich syndrome homolog; Wiskott-Aldrich syndrome protein
           [Mus musculus] gi|2499130|sp|P70315|WASP_MOUSE
           Wiskott-Aldrich syndrome protein homolog (WASp)
           gi|1314755|gb|AAC52556.1| Wiskott-Aldrich Syndrome
           Protein gi|4096355|gb|AAC99855.1| Wiskott-Aldrich
           syndrome protein (WASP) [Mus musculus]
           gi|1584081|prf||2122283A Wiskott-Aldrich syndrome
           protein
          Length = 520

 Score = 43.5 bits (101), Expect = 7e-04
 Identities = 28/78 (35%), Positives = 32/78 (40%), Gaps = 5/78 (6%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPP---AGPPSAPLAAPPHTPAPACPSD--RSWNIPPAPIERQRQ 311
           P PP    TG S P  PP   AG P AP   PP  P P CP        +PP P+     
Sbjct: 384 PPPPPPPATGRSGPPPPPLPGAGGPPAPPPPPPPPPPPPCPGSGPAPPPLPPTPVSGGSP 443

Query: 312 QRISTDGVLSPHIRQLVE 365
                 G L   IRQ ++
Sbjct: 444 APGGGRGALLDQIRQGIQ 461

>dbj|BAB62550.1| OSJNBa0089K24.5 [Oryza sativa (japonica cultivar-group)]
          Length = 1053

 Score = 43.1 bits (100), Expect = 0.001
 Identities = 23/49 (46%), Positives = 26/49 (52%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAP 293
           PSPP   ++ AS P DP   PP AP   PP  P PA    R+   PPAP
Sbjct: 576 PSPP---QSPASTPQDPAPTPPRAPTPTPPQAPLPAPSKSRA---PPAP 618

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 20/57 (35%), Positives = 26/57 (45%)
 Frame = +3

Query: 147 PSPPTMRETGASNPVDPPAGPPSAPLAAPPHTPAPACPSDRSWNIPPAPIERQRQQR 317
           PSPP  ++   S P  PPA  P    A+ P  PAP  P   +   P AP+    + R
Sbjct: 559 PSPP--QDPAPSPPHAPPAPSPPQSPASTPQDPAPTPPRAPTPTPPQAPLPAPSKSR 613

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 19/56 (33%), Positives = 24/56 (41%), Gaps = 3/56 (5%)
 Frame = +3

Query: 135 YELLPSPPTMRETGASNPVDP-PAGPPSAPLAAPPHTPAPACPSDRSWNIP--PAP 293
           Y +LP     R+  +  P  P P  PP  P  +PPH P    P     + P  PAP
Sbjct: 540 YIILPG----RQAASRAPSPPAPPSPPQDPAPSPPHAPPAPSPPQSPASTPQDPAP 591



EST assemble image


clone accession position
1 CL52c04_r AV395879 1 388
2 MXL035g04_r BP095094 1 392




Chlamydomonas reinhardtii
Kazusa DNA Research Institute