KCC000654A_c01
[Fasta Sequence]
[Nr Search]
[EST assemble image]
Fasta Sequence
>KCC000654A_C01 KCC000654A_c01
GGCACGCACATAAGTGCACCCTCTGAACCTTTAGATCTTGTGCATTTAGGTCTAGTGCAA
GTGTTCGACATCACGCCAGCGTTGTGTAGGCCAGGGCACTGATCTTCCTCGCATAATCTG
CCCACAATGCTGCGTGGTGCTGTTTCTCACGGCCCTGCGGTCGCCGACCGGGCTGCCGCT
GGCCCCGCCCGCTGCGCTGCTCCCGTCGCCCGTGGTGTGCGCAGCGCAGCGCCCACGCGT
CAGCGTCGCGCGGAGGCTTCGGTCAATGCCCCGCGGGCGGGCCCGGCCGGTAGCTACTCG
GGCGAGTGGGATAAGCTTTCAGTGGAGGAGATTGATGAGTGGCGCGATGTGGGCCCGAAG
ACGCCCCTGCTGGACACTGTCAATTACCCGGTGCACCTGAAGAACTTCAACAATGAGCAG
CTGAAGCAGCTCTGCAAGGAGCTGCGCAGTGACATCGTGCACACCGTCTCTCGCACCGGT
GGACACCTTAGCAGCAGCCTGGGCGTGGTGGAGCTGACGGTGGCTATGCACTATGTATTC
AACACCCCGGAGGACAAGATTATTTGGGACGTGGGCCACCAGGCGTATGGCCACAAGATC
CTGACTGGCCGTCGCAAGGGTATGGCCACGATTCGCCAGACCAACGGCCTTTCGGGCTTC
ACGAAGCGCGACGAGAGCGAGTACGACCCTTTCGGCGCTGGCCACAGCTCCACCTCGATT
TCGGCGGCTCTGGGTATGGCGGTGGGCCGCGACGTCAAGGGCAAGAAGAACAGTGTGATC
GCTGTCATCGGCGACGGCGCCATCACCGGGGGTATGGCCTATGAGGCCATGAACCATGCG
GGCTTCCTGGACAAGAACATGATTGTGATTCTGAACGACAACCAGCAGGTGTCGCTGCCC
ACGCAGTACAACAACAAGAACCAGGACCCCGTGGGCGCCCTGTCCAGCGCCCTGGCGCGC
CTGCAGGCCAACCGGCCCCTGCGCGAGCTGCGCGAGATTGCCAAGGGCGTGACCAAGCAG
CTGCCTGACGTTGTCCAGAAGGCAACTGCTAAGATTGACGAGTATGCTCGCGGCATGATC
AGCGGCACTGGCTCCACGCTGTTTGAGGAGCTGGGCCTGTACTACATCGGCCCTGTGGAC
GGCCACAACCTGGACGACCTCATCGCCGTGCTCAGCGAGGTG
Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000654A_C01 KCC000654A_c01
(1182 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
pir||T08140 1-deoxy-D-xylulose-5-phosphate synthase precursor - ... 701 0.0
emb|CAD22530.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medic... 433 e-120
sp|O78328|DXS_CAPAN Probable 1-deoxy-D-xylulose 5-phosphate synt... 423 e-117
gb|AAD38941.1|AF143812_1 1-D-deoxyxylulose 5-phosphate synthase ... 422 e-117
ref|NP_193291.1| DEF (CLA1) protein [Arabidopsis thaliana] gi|13... 420 e-116
>pir||T08140 1-deoxy-D-xylulose-5-phosphate synthase precursor - Chlamydomonas
reinhardtii gi|4185881|emb|CAA07554.1|
1-deoxy-D-xylulose-5-phosphate synthase [Chlamydomonas
reinhardtii]
Length = 735
Score = 701 bits (1809), Expect = 0.0
Identities = 352/352 (100%), Positives = 352/352 (100%)
Frame = +1
Query: 127 MLRGAVSHGPAVADRAAAGPARCAAPVARGVRSAAPTRQRRAEASVNAPRAGPAGSYSGE 306
MLRGAVSHGPAVADRAAAGPARCAAPVARGVRSAAPTRQRRAEASVNAPRAGPAGSYSGE
Sbjct: 1 MLRGAVSHGPAVADRAAAGPARCAAPVARGVRSAAPTRQRRAEASVNAPRAGPAGSYSGE 60
Query: 307 WDKLSVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGH 486
WDKLSVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGH
Sbjct: 61 WDKLSVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGH 120
Query: 487 LSSSLGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTK 666
LSSSLGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTK
Sbjct: 121 LSSSLGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTK 180
Query: 667 RDESEYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGF 846
RDESEYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGF
Sbjct: 181 RDESEYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGF 240
Query: 847 LDKNMIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLP 1026
LDKNMIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLP
Sbjct: 241 LDKNMIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLP 300
Query: 1027 DVVQKATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEV 1182
DVVQKATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEV
Sbjct: 301 DVVQKATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEV 352
>emb|CAD22530.1| 1-deoxy-D-xylulose 5-phosphate synthase 1 [Medicago truncatula]
Length = 717
Score = 433 bits (1114), Expect = e-120
Identities = 209/288 (72%), Positives = 249/288 (85%)
Frame = +1
Query: 319 SVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGHLSSS 498
S+ E+ E+ P TPLLDT+NYP+H+KN + ++LKQL ELRSD++ +VSRTGGHL SS
Sbjct: 57 SLSEMGEYYSQRPPTPLLDTINYPIHMKNLSTKELKQLADELRSDVIFSVSRTGGHLGSS 116
Query: 499 LGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTKRDES 678
LGVVELT+A+HYVFNTP+DKI+WDVGHQ+Y HKILTGRR M T+RQTNGLSGFTKR ES
Sbjct: 117 LGVVELTIALHYVFNTPQDKILWDVGHQSYPHKILTGRRDKMHTMRQTNGLSGFTKRSES 176
Query: 679 EYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGFLDKN 858
EYD FG GHSST+ISA LGMAVGRD+KG+KN V+AVIGDGA+T G AYEAMN+AG+LD +
Sbjct: 177 EYDSFGTGHSSTTISAGLGMAVGRDLKGRKNDVVAVIGDGAMTAGQAYEAMNNAGYLDSD 236
Query: 859 MIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQ 1038
MIVILNDN+QVSLPT + PVGALSSAL+RLQ+N+PLRELRE+AKGVTK++ +
Sbjct: 237 MIVILNDNKQVSLPTATLDGPIPPVGALSSALSRLQSNKPLRELREVAKGVTKRIGGPMH 296
Query: 1039 KATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEV 1182
+ AK+DEYARGMISGTGSTLFEELGLYYIGPVDGHN+DDL+A+L EV
Sbjct: 297 ELAAKVDEYARGMISGTGSTLFEELGLYYIGPVDGHNIDDLVAILKEV 344
>sp|O78328|DXS_CAPAN Probable 1-deoxy-D-xylulose 5-phosphate synthase, chloroplast
precursor (1-deoxyxylulose-5-phosphate synthase) (DXP
synthase) (DXPS) (CapTKT2) gi|7488970|pir||T09543
deoxyxylulose synthase (EC 2.2.1.-) TKT2 precursor,
chloroplast [validated] - pepper
gi|3559816|emb|CAA75778.1| transketolase 2 [Capsicum
annuum]
Length = 719
Score = 423 bits (1087), Expect = e-117
Identities = 205/288 (71%), Positives = 247/288 (85%)
Frame = +1
Query: 319 SVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGHLSSS 498
S+ E E+ P TP++DT+NYP+H+KN + ++LKQL ELRSD + VS+TGGHL SS
Sbjct: 59 SLSESGEYYTQRPPTPIVDTINYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGSS 118
Query: 499 LGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTKRDES 678
LGVVELTVA+HYVFN P+D+I+WDVGHQ+Y HKILTGRR+ M+T+RQTNGL+GFTKR ES
Sbjct: 119 LGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRREKMSTLRQTNGLAGFTKRSES 178
Query: 679 EYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGFLDKN 858
EYD FG GHSST+ISA LGMAVGRD+KG+ N+VIAVIGDGA+T G AYEAMN+AG+LD +
Sbjct: 179 EYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSD 238
Query: 859 MIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQ 1038
MIVILNDN+QVSLPT + PVGALSSAL+RLQ+NRPLRELRE+AKGVTKQ+ +
Sbjct: 239 MIVILNDNRQVSLPTATLDGPVPPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 298
Query: 1039 KATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEV 1182
+ AK+DEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDLI++L EV
Sbjct: 299 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLISILKEV 346
>gb|AAD38941.1|AF143812_1 1-D-deoxyxylulose 5-phosphate synthase [Lycopersicon esculentum]
Length = 719
Score = 422 bits (1086), Expect = e-117
Identities = 207/288 (71%), Positives = 246/288 (84%)
Frame = +1
Query: 319 SVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGHLSSS 498
S+ E E+ P TP+LDTVNYP+H+KN + ++LKQL ELRSD + VS+TGGHL SS
Sbjct: 59 SLSESGEYYTQRPPTPILDTVNYPIHMKNLSLKELKQLADELRSDTIFNVSKTGGHLGSS 118
Query: 499 LGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTKRDES 678
LGVVELTVA+HYVFN P+D+I+WDVGHQ+Y HKILTGRR M+T+RQT+GL+GFTKR ES
Sbjct: 119 LGVVELTVALHYVFNAPQDRILWDVGHQSYPHKILTGRRDKMSTLRQTDGLAGFTKRSES 178
Query: 679 EYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGFLDKN 858
EYD FG GHSST+ISA LGMAVGRD+KG+ N+VIAVIGDGA+T G AYEAMN+AG+LD +
Sbjct: 179 EYDCFGTGHSSTTISAGLGMAVGRDLKGRNNNVIAVIGDGAMTAGQAYEAMNNAGYLDSD 238
Query: 859 MIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQ 1038
MIVILNDN+QVSLPT + PVGALSSAL+RLQ+NRPLRELRE+AKGVTKQ+ +
Sbjct: 239 MIVILNDNRQVSLPTATLDGPVAPVGALSSALSRLQSNRPLRELREVAKGVTKQIGGPMH 298
Query: 1039 KATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEV 1182
+ AK+DEYARGMISG+GSTLFEELGLYYIGPVDGHN+DDLIA+L EV
Sbjct: 299 ELAAKVDEYARGMISGSGSTLFEELGLYYIGPVDGHNIDDLIAILKEV 346
>ref|NP_193291.1| DEF (CLA1) protein [Arabidopsis thaliana]
gi|13124705|sp|Q38854|DXS_ARATH Probable
1-deoxy-D-xylulose 5-phosphate synthase, chloroplast
precursor (1-deoxyxylulose-5-phosphate synthase) (DXP
synthase) (DXPS) gi|25311121|pir||H85171 DEF (CLA1)
protein [imported] - Arabidopsis thaliana
gi|5281019|emb|CAB45992.1| DEF (CLA1) protein
[Arabidopsis thaliana] gi|7268304|emb|CAB78598.1| DEF
(CLA1) protein [Arabidopsis thaliana]
gi|26983842|gb|AAN86173.1| putative DEF (CLA1) protein
[Arabidopsis thaliana]
Length = 717
Score = 420 bits (1079), Expect = e-116
Identities = 205/288 (71%), Positives = 245/288 (84%)
Frame = +1
Query: 319 SVEEIDEWRDVGPKTPLLDTVNYPVHLKNFNNEQLKQLCKELRSDIVHTVSRTGGHLSSS 498
S+ E E+ P TPLLDT+NYP+H+KN + ++LKQL ELRSD++ VS+TGGHL SS
Sbjct: 60 SLAEKGEYYSNRPPTPLLDTINYPIHMKNLSVKELKQLSDELRSDVIFNVSKTGGHLGSS 119
Query: 499 LGVVELTVAMHYVFNTPEDKIIWDVGHQAYGHKILTGRRKGMATIRQTNGLSGFTKRDES 678
LGVVELTVA+HY+FNTP+DKI+WDVGHQ+Y HKILTGRR M T+RQTNGLSGFTKR ES
Sbjct: 120 LGVVELTVALHYIFNTPQDKILWDVGHQSYPHKILTGRRGKMPTMRQTNGLSGFTKRGES 179
Query: 679 EYDPFGAGHSSTSISAALGMAVGRDVKGKKNSVIAVIGDGAITGGMAYEAMNHAGFLDKN 858
E+D FG GHSST+ISA LGMAVGRD+KGK N+V+AVIGDGA+T G AYEAMN+AG+LD +
Sbjct: 180 EHDCFGTGHSSTTISAGLGMAVGRDLKGKNNNVVAVIGDGAMTAGQAYEAMNNAGYLDSD 239
Query: 859 MIVILNDNQQVSLPTQYNNKNQDPVGALSSALARLQANRPLRELREIAKGVTKQLPDVVQ 1038
MIVILNDN+QVSLPT + PVGALSSAL+RLQ+N LRELRE+AKG+TKQ+ +
Sbjct: 240 MIVILNDNKQVSLPTATLDGPSPPVGALSSALSRLQSNPALRELREVAKGMTKQIGGPMH 299
Query: 1039 KATAKIDEYARGMISGTGSTLFEELGLYYIGPVDGHNLDDLIAVLSEV 1182
+ AK+DEYARGMISGTGS+LFEELGLYYIGPVDGHN+DDL+A+L EV
Sbjct: 300 QLAAKVDEYARGMISGTGSSLFEELGLYYIGPVDGHNIDDLVAILKEV 347
EST assemble image
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clone |
accession |
position |
| 1 |
MXL093f12_r |
BP098464 |
1 |
550 |
| 2 |
HCL088e03_r |
AV644436 |
96 |
632 |
| 3 |
HCL026g04_r |
AV641045 |
98 |
534 |
| 4 |
MXL004d05_r |
BP093162 |
99 |
347 |
| 5 |
HCL081d09_r |
AV644080 |
100 |
594 |
| 6 |
MXL051b02_r |
BP096015 |
100 |
475 |
| 7 |
HCL002h02_r |
AV639673 |
100 |
487 |
| 8 |
MXL051c03_r |
BP096023 |
100 |
477 |
| 9 |
HCL039h08_r |
AV641765 |
100 |
621 |
| 10 |
MXL010b03_r |
BP093558 |
102 |
422 |
| 11 |
HCL040f10_r |
AV641810 |
102 |
615 |
| 12 |
LCL017d05_r |
AV626886 |
102 |
355 |
| 13 |
HCL006f09_r |
AV639885 |
104 |
549 |
| 14 |
HCL054b06_r |
AV642576 |
106 |
619 |
| 15 |
HCL009d06_r |
AV640050 |
106 |
311 |
| 16 |
HCL015d03_r |
AV640386 |
113 |
288 |
| 17 |
LCL094e09_r |
AV631467 |
130 |
376 |
| 18 |
LCL019f11_r |
AV627005 |
130 |
278 |
| 19 |
MXL033h04_r |
BP094986 |
131 |
512 |
| 20 |
CL52b06_r |
AV395853 |
133 |
632 |
| 21 |
LCL073f12_r |
AV630130 |
483 |
645 |
| 22 |
MXL079g01_r |
BP097689 |
518 |
898 |
| 23 |
CM052f08_r |
AV390535 |
725 |
1279 |
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Chlamydomonas reinhardtii
Kazusa DNA Research Institute