KCC000647A_c01
[Fasta Sequence]   [Nr Search]   [EST assemble image]  

Fasta Sequence
>KCC000647A_C01 KCC000647A_c01
GCAATACTCCAGCAGCAGGAGTCTAACTTGCTGAGCGCTTTACAGTTTACTTCTTGGCCC
GCCGGGTCGACCGTGACAAAATGGCCTTCGCGAGCAGCAGCATGGCCGCGCTGTGTAGGC
CACTGGCAGTGGTCTCGAGTGGACTTGGCTCGGCACTGAGCAGGGCCAGCCAGCTCCTGA
CCTCGGGCAGCCTGTCCTCCTCGCCCACCGCCTCGCACTGCTCCACCTGGCGCTTCATTT
CGGACGGCGTGGTCGGCTCCAAGGGCCGGCCCGACAGCCTGTTCCTGTCCGACATCAGCA
TGTCCGGCCACCGCGCGCCACTGCTGCTGGGCTGGCTCAACTACCTGGAGCGCCACCTGC
CGCACGTGGGCTTCTTCGAGCCCATCGGCGGCCGCGCGCTGGCGGGCAGCGAGCTCAGCG
TGGACCGGCACGTGGAGCTCATGTACCGTGTGTTCAACATGAAGGGCGACGCCACGCGCA
TGACCGGCATCAGCGACACAGAGGCCGCACAGCTCATCGCCAGCGGCAAGCAGTCCGAGG
TGCTCGACCGCATCTACGCCGCATACAT


Nr search


BLASTX 2.2.2 [Dec-14-2001]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= KCC000647A_C01 KCC000647A_c01
         (568 letters)

Database: nr 
           1,537,769 sequences; 498,525,298 total letters

Searching..................................................done

                                                                   Score     E
Sequences producing significant alignments:                        (bits)  Value

ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177...    49  3e-06
ref|ZP_00013649.1| COG0645: Predicted kinase [Rhodospirillum rub...    52  7e-06
pir||T45134 hypothetical protein [imported] - Microbacterium amm...    51  1e-05
pir||T43481 probable mucin DKFZp434C196.1 - human (fragment) gi|...    50  2e-05
ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyc...    50  2e-05

>ref|XP_311331.1| ENSANGP00000001657 [Anopheles gambiae] gi|30177813|gb|EAA06779.2|
           ENSANGP00000001657 [Anopheles gambiae str. PEST]
          Length = 283

 Score = 49.3 bits (116), Expect(2) = 3e-06
 Identities = 31/107 (28%), Positives = 58/107 (53%)
 Frame = +1

Query: 232 ASFRTAWSAPRAGPTACSCPTSACPATARHCCWAGSTTWSATCRTWASSSPSAAARWRAA 411
           +S R+  S+  +  T+CSC TS+C + A  C    S++ + +C   ASSS S A+   + 
Sbjct: 130 SSCRSGTSSCSSCTTSCSCCTSSCSSCASSCSSCASSSSTTSCSCCASSSSSCASSCSSC 189

Query: 412 SSAWTGTWSSCTVCST*RATPRA*PASATQRPHSSSPAASSPRCSTA 552
           +S+ +   SSC+  +T  ++  +  +S+T    S + + SS   S++
Sbjct: 190 ASSCSSCASSCSSGTTSSSSCASSCSSSTSSSSSGTTSCSSGTTSSS 236

 Score = 41.2 bits (95), Expect = 0.010
 Identities = 29/114 (25%), Positives = 57/114 (49%), Gaps = 6/114 (5%)
 Frame = +1

Query: 232 ASFRTAWSAPRAGPTACSCPTSACPATARHC------CWAGSTTWSATCRTWASSSPSAA 393
           +S  ++ S+  +G T+CS  TS+C +    C      C +G+T+ +++  +  S + S +
Sbjct: 25  SSCSSSTSSGSSGTTSCSSCTSSCSSGTSSCSSATSSCSSGTTSCTSSTSSSNSCTSSCS 84

Query: 394 ARWRAASSAWTGTWSSCTVCST*RATPRA*PASATQRPHSSSPAASSPRCSTAS 555
           +   + SS+ T + S  + CS+   +  +  +S +    S S   SS R  T+S
Sbjct: 85  SGTSSRSSSTTSSSSGTSSCSSGTTSSSSCASSCSSSTSSCSSGTSSCRSGTSS 138

 Score = 40.4 bits (93), Expect(2) = 0.004
 Identities = 31/113 (27%), Positives = 61/113 (53%), Gaps = 4/113 (3%)
 Frame = +1

Query: 232 ASFRTAWSAPRAGPTACSCPTSACPATARHC---CWAGSTTWSATCRTWASSSPSAAARW 402
           +S  T+ S   +  ++C+   S+C ++   C   C +G+T+ S++C +  SSS S+++  
Sbjct: 166 SSSTTSCSCCASSSSSCASSCSSCASSCSSCASSCSSGTTS-SSSCASSCSSSTSSSSSG 224

Query: 403 RAASSAWTGTWSSCT-VCST*RATPRA*PASATQRPHSSSPAASSPRCSTAST 558
             + S+ T + S CT  CS+  ++  +   +++    S S  ASS   ST+S+
Sbjct: 225 TTSCSSGTTSSSCCTSSCSSSTSSSCSGTTASSSCASSCSSCASSCSSSTSSS 277

 Score = 38.1 bits (87), Expect = 0.084
 Identities = 30/111 (27%), Positives = 57/111 (51%), Gaps = 9/111 (8%)
 Frame = +1

Query: 253 SAPRAGPTACSCPTSACPA---------TARHCCWAGSTTWSATCRTWASSSPSAAARWR 405
           S+  +  ++CS  TS+C +         T+  CC +  ++ +++C + ASSS + +    
Sbjct: 116 SSCSSSTSSCSSGTSSCRSGTSSCSSCTTSCSCCTSSCSSCASSCSSCASSSSTTSCSCC 175

Query: 406 AASSAWTGTWSSCTVCST*RATPRA*PASATQRPHSSSPAASSPRCSTAST 558
           A+SS+     S  + CS+  ++  +  +S +    SSS  ASS   ST+S+
Sbjct: 176 ASSSS-----SCASSCSSCASSCSSCASSCSSGTTSSSSCASSCSSSTSSS 221

 Score = 37.7 bits (86), Expect = 0.11
 Identities = 25/111 (22%), Positives = 56/111 (49%), Gaps = 2/111 (1%)
 Frame = +1

Query: 232 ASFRTAWSAPRAGPTACSCPTSACPATARHCCWAGSTTWSAT--CRTWASSSPSAAARWR 405
           +S  ++ ++  +G ++CS  T++  + A  C  + S+  S T  CR+  SS  S      
Sbjct: 88  SSRSSSTTSSSSGTSSCSSGTTSSSSCASSCSSSTSSCSSGTSSCRSGTSSCSSCTTSCS 147

Query: 406 AASSAWTGTWSSCTVCST*RATPRA*PASATQRPHSSSPAASSPRCSTAST 558
             +S+ +   SSC+ C++  +T      +++    +SS ++ +  CS+ ++
Sbjct: 148 CCTSSCSSCASSCSSCASSSSTTSCSCCASSSSSCASSCSSCASSCSSCAS 198

 Score = 35.0 bits (79), Expect = 0.71
 Identities = 31/129 (24%), Positives = 59/129 (45%), Gaps = 20/129 (15%)
 Frame = +1

Query: 232 ASFRTAWSAPRAGPTACSCPTSACPATARHC--------------------CWAGSTTWS 351
           +S  +A S+  +G T+C+  TS+  +    C                    C +G+T+ S
Sbjct: 53  SSCSSATSSCSSGTTSCTSSTSSSNSCTSSCSSGTSSRSSSTTSSSSGTSSCSSGTTS-S 111

Query: 352 ATCRTWASSSPSAAARWRAASSAWTGTWSSCTVCST*RATPRA*PASATQRPHSSSPAAS 531
           ++C +  SSS S+ +   ++  + T + SSCT   +   +  +  AS+     SSS   S
Sbjct: 112 SSCASSCSSSTSSCSSGTSSCRSGTSSCSSCTTSCSCCTSSCSSCASSCSSCASSSSTTS 171

Query: 532 SPRCSTAST 558
              C+++S+
Sbjct: 172 CSCCASSSS 180

 Score = 33.5 bits (75), Expect = 2.1
 Identities = 25/97 (25%), Positives = 52/97 (52%), Gaps = 3/97 (3%)
 Frame = +1

Query: 274 TACSCPTSACPATARHCCWAGSTTWS---ATCRTWASSSPSAAARWRAASSAWTGTWSSC 444
           T+CS  TS+C ++      +G+T+ S   ++C +  SS  SA +   + +++ T + SS 
Sbjct: 18  TSCSSGTSSCSSSTSSGS-SGTTSCSSCTSSCSSGTSSCSSATSSCSSGTTSCTSSTSSS 76

Query: 445 TVCST*RATPRA*PASATQRPHSSSPAASSPRCSTAS 555
             C++  ++  +  +S+T    S + + SS   S++S
Sbjct: 77  NSCTSSCSSGTSSRSSSTTSSSSGTSSCSSGTTSSSS 113

 Score = 33.5 bits (75), Expect = 2.1
 Identities = 21/92 (22%), Positives = 44/92 (47%)
 Frame = +1

Query: 283 SCPTSACPATARHCCWAGSTTWSATCRTWASSSPSAAARWRAASSAWTGTWSSCTVCST* 462
           S  +S+  AT   CC    ++ +++C +  SS  S      + +S+ +   SSC+  ++ 
Sbjct: 2   SASSSSSGATTSSCCTTSCSSGTSSCSSSTSSGSSGTTSCSSCTSSCSSGTSSCSSATSS 61

Query: 463 RATPRA*PASATQRPHSSSPAASSPRCSTAST 558
            ++      S+T   +S + + SS   S +S+
Sbjct: 62  CSSGTTSCTSSTSSSNSCTSSCSSGTSSRSSS 93

 Score = 33.1 bits (74), Expect(2) = 0.012
 Identities = 26/87 (29%), Positives = 39/87 (43%)
 Frame = +1

Query: 274 TACSCPTSACPATARHCCWAGSTTWSATCRTWASSSPSAAARWRAASSAWTGTWSSCTVC 453
           ++CS  TS+  +    C  +  TT S+ C +  SSS S++     ASS+   + SSC   
Sbjct: 212 SSCSSSTSSSSSGTTSC--SSGTTSSSCCTSSCSSSTSSSCSGTTASSSCASSCSSCA-- 267

Query: 454 ST*RATPRA*PASATQRPHSSSPAASS 534
                      +S +    SSS  ASS
Sbjct: 268 -----------SSCSSSTSSSSSCASS 283

 Score = 32.0 bits (71), Expect(2) = 0.095
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +1

Query: 265 AGPTACSCPTSACPATARHCCWAGSTTWSATCRTWASSSPSAAARWRAASSA 420
           +G T+ SC TS+C ++    C    TT S++C +  SS  S+ +   ++SS+
Sbjct: 230 SGTTSSSCCTSSCSSSTSSSC--SGTTASSSCASSCSSCASSCSSSTSSSSS 279

 Score = 26.9 bits (58), Expect(2) = 0.012
 Identities = 18/48 (37%), Positives = 25/48 (51%)
 Frame = +3

Query: 84  AFASSSMAALCRPLAVVSSGLGSALSRASQLLTSGSLSSSPTASHCST 227
           A +SSS A+ C       S   S+ S  +   +SG+ SSS  AS CS+
Sbjct: 176 ASSSSSCASSC-------SSCASSCSSCASSCSSGTTSSSSCASSCSS 216

 Score = 25.0 bits (53), Expect(2) = 0.095
 Identities = 22/49 (44%), Positives = 27/49 (54%), Gaps = 1/49 (2%)
 Frame = +3

Query: 84  AFASSSMAALCRPLAV-VSSGLGSALSRASQLLTSGSLSSSPTASHCST 227
           A + SS A+ C   A   SSG  S+ S AS   +S S SSS T S CS+
Sbjct: 183 ASSCSSCASSCSSCASSCSSGTTSSSSCASSCSSSTSSSSSGTTS-CSS 230

 Score = 23.5 bits (49), Expect(2) = 3e-06
 Identities = 14/46 (30%), Positives = 23/46 (49%)
 Frame = +3

Query: 90  ASSSMAALCRPLAVVSSGLGSALSRASQLLTSGSLSSSPTASHCST 227
           +S+S  + C       S   ++ S  +   +SG+ SSS  AS CS+
Sbjct: 75  SSNSCTSSCSSGTSSRSSSTTSSSSGTSSCSSGTTSSSSCASSCSS 120

 Score = 21.2 bits (43), Expect(2) = 0.004
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = +3

Query: 93  SSSMAALCRPLAVVSSGLGSALSRASQLLTSGSLSSSPTAS 215
           SSS  +     +  SSG  S+ S AS   +S S  SS T+S
Sbjct: 91  SSSTTSSSSGTSSCSSGTTSSSSCASSCSSSTSSCSSGTSS 131

>ref|ZP_00013649.1| COG0645: Predicted kinase [Rhodospirillum rubrum]
          Length = 759

 Score = 51.6 bits (122), Expect = 7e-06
 Identities = 39/129 (30%), Positives = 57/129 (43%), Gaps = 23/129 (17%)
 Frame = +1

Query: 160 AGPASS*PRAACP-PRPPPRTAPPGAS---------FRTAW----SAPRAGPTACSCPTS 297
           AGP SS P  AC  P   P T  P AS         FR +W    SA     +  S   S
Sbjct: 27  AGPPSSSPSCACSSPSSCPSTGRPSASSCRPCRWGSFRRSWYRSSSASSGASSRPSSSAS 86

Query: 298 ACPATARHCCWAGST--TWSATCRTWASSSPSAAARWRAASSAWTGT-------WSSCTV 450
             P+ +    W  S+  +W+ +  ++A+SS ++ A WR AS++W+ +       W+ C  
Sbjct: 87  GRPSASSAASWTPSSGASWTPSSASFAASSAASGASWRWASASWSSSDLSDFCAWNGCLK 146

Query: 451 CST*RATPR 477
               R  PR
Sbjct: 147 RFDNRVRPR 155

 Score = 39.3 bits (90), Expect = 0.038
 Identities = 43/117 (36%), Positives = 60/117 (50%), Gaps = 6/117 (5%)
 Frame = +1

Query: 202 RPPPRTAPPGASFRTAWSA---PRAGPT-ACSCPTSACPATARHCCWA-GSTTWSATCRT 366
           R  P   P  A  RT+ S+   P + P+ ACS P+S CP+T R    +     W +  R+
Sbjct: 8   RRRPSCRPSSACHRTSSSSAGPPSSSPSCACSSPSS-CPSTGRPSASSCRPCRWGSFRRS 66

Query: 367 W-ASSSPSAAARWRAASSAWTGTWSSCTVCST*RATPRA*PASATQRPHSSSPAASS 534
           W  SSS S+ A  R +SSA +G  S+ +  S    TP    + A+  P S+S AASS
Sbjct: 67  WYRSSSASSGASSRPSSSA-SGRPSASSAASW---TP---SSGASWTPSSASFAASS 116

>pir||T45134 hypothetical protein [imported] - Microbacterium ammoniaphilum
           (fragment) gi|1679831|emb|CAA55649.1| unknown
           [Microbacterium ammoniaphilum]
          Length = 529

 Score = 51.2 bits (121), Expect = 1e-05
 Identities = 47/125 (37%), Positives = 57/125 (45%), Gaps = 7/125 (5%)
 Frame = +2

Query: 206 HRLALLHLALHFGRRGRLQGPARQPVPVRHQHV----RPPRATAAGLAQLP---GAPPAA 364
           HR       +H  +R   +  AR  +PVR        R P   AA  A+     GA PA 
Sbjct: 71  HRRPAQRRQVHPLQRPHQEPGARGELPVRDDRAERGRREPARPAARDARRHLRLGAHPAR 130

Query: 365 RGLLRAHRRPRAGGQRAQRGPARGAHVPCVQHEGRRHAHDRHQRHRGRTAHRQRQAVRGA 544
           RG+LR HRR RA G+R  RGP +   VP     GRR    R   HR R   R+RQ     
Sbjct: 131 RGVLRRHRRHRARGERG-RGPRQ--QVPRQHPRGRRDRAGRPGLHRRRRRARRRQ----G 183

Query: 545 RPHLR 559
           RP +R
Sbjct: 184 RPQVR 188

 Score = 40.0 bits (92), Expect = 0.022
 Identities = 36/104 (34%), Positives = 44/104 (41%), Gaps = 8/104 (7%)
 Frame = +2

Query: 275 QPVPVRHQHVRPPRATAAGLAQLPGAPPAARGLLRAHRRPRAGGQRAQRGPARGA----- 439
           +P    ++H RP +       Q P   P ARG L   R  RA  +R +R PAR A     
Sbjct: 63  EPRGSHYRHRRPAQRRQVHPLQRPHQEPGARGELPV-RDDRA--ERGRREPARPAARDAR 119

Query: 440 -HVPCVQHEGRRHAHDRHQRH--RGRTAHRQRQAVRGARPHLRR 562
            H+    H  RR    RH+RH  RG      RQ V    P  RR
Sbjct: 120 RHLRLGAHPARRGVLRRHRRHRARGERGRGPRQQVPRQHPRGRR 163

>pir||T43481 probable mucin DKFZp434C196.1 - human (fragment)
           gi|6599134|emb|CAB63715.1| hypothetical protein [Homo
           sapiens]
          Length = 580

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 45/139 (32%), Positives = 55/139 (39%), Gaps = 5/139 (3%)
 Frame = +1

Query: 160 AGPASS*PRAACPPRPPPRTAPPGASFRTAWSAPRAGPTACSCPTSACPATARHCCWAGS 339
           A P  S P  A P R PPR +P G    T  +A   G  + + PT   P          +
Sbjct: 111 ASPMGS-PHRASPMRTPPRASPTG----TPSTASPTGTPSSASPTGTPPR---------A 156

Query: 340 TTWSATCRTWASSSPSAAARWRAASSAWTGTWSSCTVCST*RATPRA*P-----ASATQR 504
           +      R WA+ SPS A+  R  S A    W      S  R  PR  P     AS T+ 
Sbjct: 157 SPTGTPPRAWATRSPSTASLTRTPSRASLTRWP--PRASPTRTPPRESPRMSHRASPTRT 214

Query: 505 PHSSSPAASSPRCSTASTP 561
           P  +SP    PR S   TP
Sbjct: 215 PPRASPTRRPPRASPTRTP 233

 Score = 43.5 bits (101), Expect = 0.002
 Identities = 44/143 (30%), Positives = 58/143 (39%), Gaps = 7/143 (4%)
 Frame = +1

Query: 154 H*AGPASS*PRAACPPRPPPRTAPPGASFRTA-----WSAPRAGPTACSCPTSACPATAR 318
           H A P    PRA+ P R PPR +P G+  R +      ++PR  P A    T +  +  R
Sbjct: 242 HRASPTRMPPRAS-PTRRPPRASPTGSPPRASPMTPPRASPRTPPRASPTTTPSRASLTR 300

Query: 319 HCCWAGSTTWSATCRTWASSSPSAAARWRAASSAWTGTWSSCTVCST*RATPRA*P--AS 492
              WA  TT  +        S  +  R    +S  TGT S        RA+P   P  AS
Sbjct: 301 TPSWASPTTTPSRASLMKMESTVSITRTPPRASP-TGTPS--------RASPTGTPSRAS 351

Query: 493 ATQRPHSSSPAASSPRCSTASTP 561
            T  P  +S   +  R S   TP
Sbjct: 352 LTGSPSRASLTGTPSRASLIGTP 374

 Score = 38.9 bits (89), Expect = 0.049
 Identities = 46/179 (25%), Positives = 66/179 (36%), Gaps = 3/179 (1%)
 Frame = +1

Query: 34  SALQFTSWPAGSTVTKWPSRAAAWPRCVGHWQWSRVDLARH*AGPASS*PRAAC---PPR 204
           S    T  P+ +++T+WP RA+  P      +  R+    H A P  + PRA+    PPR
Sbjct: 172 STASLTRTPSRASLTRWPPRAS--PTRTPPRESPRMS---HRASPTRTPPRASPTRRPPR 226

Query: 205 PPPRTAPPGASFRTAWSAPRAGPTACSCPTSACPATARHCCWAGSTTWSATCRTWASSSP 384
             P   PP  S RT+    RA PT                                   P
Sbjct: 227 ASPTRTPPRESLRTSH---RASPTRMP--------------------------------P 251

Query: 385 SAAARWRAASSAWTGTWSSCTVCST*RATPRA*PASATQRPHSSSPAASSPRCSTASTP 561
            A+   R   ++ TG        S  RA+P   P ++ + P  +SP  +  R S   TP
Sbjct: 252 RASPTRRPPRASPTG--------SPPRASPMTPPRASPRTPPRASPTTTPSRASLTRTP 302

 Score = 32.0 bits (71), Expect = 6.0
 Identities = 44/170 (25%), Positives = 67/170 (38%)
 Frame = +1

Query: 58  PAGSTVTKWPSRAAAWPRCVGHWQWSRVDLARH*AGPASS*PRAACPPRPPPRTAPPGAS 237
           P+ +++T+ P RA+   R       S   L R         P  A P R P R +     
Sbjct: 2   PSRASLTRTPPRASLMRRP------STASLTRT--------PSRASPTRMPSRASLKMTP 47

Query: 238 FRTAWSAPRAGPTACSCPTSACPATARHCCWAGSTTWSATCRTWASSSPSAAARWRAASS 417
           FR + +   +     + P ++   T          T ++  RT   +SP+   R    +S
Sbjct: 48  FRASLTKMESTALLRTLPRASLMRTP---------TRASLMRTPPRASPT---RKPPRAS 95

Query: 418 AWTGTWSSCTVCST*RATPRA*PASATQRPHSSSPAASSPRCSTASTPHT 567
             T + +S T     R  PRA P  +   PH +SP  + PR S   TP T
Sbjct: 96  PRTPSRASPT-----RRLPRASPMGS---PHRASPMRTPPRASPTGTPST 137

>ref|NP_823399.1| putative protoporphyrinogen oxidase [Streptomyces avermitilis
           MA-4680] gi|29605870|dbj|BAC69934.1| putative
           protoporphyrinogen oxidase [Streptomyces avermitilis
           MA-4680]
          Length = 474

 Score = 50.4 bits (119), Expect = 2e-05
 Identities = 53/171 (30%), Positives = 73/171 (41%), Gaps = 48/171 (28%)
 Frame = +1

Query: 193 CPPRPP-----PRTAPPGASFRTA------WS----------APRAGPTACSCPTSACPA 309
           CPPRPP     PR  PP  S+  +      WS          +P+A  ++C  P++  P+
Sbjct: 284 CPPRPPPSCCAPRHPPPRPSWPASSTRPWRWSPSPTAAVGPASPKAAASSC-LPSTGAPS 342

Query: 310 TARHC---CWAGSTTWSATCRTWASSSPSAAARWRAAS---SAWTGTWSSC--------- 444
             R       AGS T + TC   A  S   A R  +A    ++WT   ++C         
Sbjct: 343 RHRRSPPRSGAGSRTRTPTCWCCARRSGGTARRRSSAGTTPASWTSRATTCARRPAWPPR 402

Query: 445 ----------TVC-ST*RATPRA*PASATQRPH-SSSPAASSPRCSTASTP 561
                     T C ST  AT RA PASAT  P   +SP+A+    ++AS P
Sbjct: 403 RSPAASPAGPTACRSTPSATTRAWPASATTSPSCPASPSAARRTTASASRP 453

 Score = 37.7 bits (86), Expect = 0.11
 Identities = 37/116 (31%), Positives = 47/116 (39%), Gaps = 11/116 (9%)
 Frame = +1

Query: 61  AGSTVTKWPSRAAAWPRCVGHWQWSRVDLARH*AGPASS*PRAACPPRPPPRTAPPGASF 240
           AG+T   W SRA                 AR  A P    P AA P  P    + P A+ 
Sbjct: 379 AGTTPASWTSRATT--------------CARRPAWPPRRSP-AASPAGPTACRSTPSATT 423

Query: 241 RTAWSAPRAGPTACSCPTSACPATARHCCWAGS-----------TTWSATCRTWAS 375
           R AW  P +  T+ SCP S  P+ AR    + S           ++W+AT R W S
Sbjct: 424 R-AW--PASATTSPSCPAS--PSAARRTTASASRPASPARTPPWSSWAATARGWTS 474

 Score = 37.4 bits (85), Expect = 0.14
 Identities = 60/184 (32%), Positives = 66/184 (35%), Gaps = 56/184 (30%)
 Frame = +1

Query: 58  PAGSTVTKWPSRAAAWPRCVGH-WQWSRVDLARH*AGPASS*PRAA---CPP-------- 201
           P      + P    +WP      W+WS    A    GPAS  P+AA   C P        
Sbjct: 289 PPSCCAPRHPPPRPSWPASSTRPWRWSPSPTAA--VGPAS--PKAAASSCLPSTGAPSRH 344

Query: 202 -RPPPRTAPPGASFRT----AWSAPR-----------AGPTACSCPTSACPATARHCCW- 330
            R PPR+   GA  RT     W   R           AG T  S  TS     AR   W 
Sbjct: 345 RRSPPRS---GAGSRTRTPTCWCCARRSGGTARRRSSAGTTPASW-TSRATTCARRPAWP 400

Query: 331 ---------AGST----TWSATCRTWASS---------SPSAAARW-----RAASSAWTG 429
                    AG T    T SAT R W +S         SPSAA R      R AS A T 
Sbjct: 401 PRRSPAASPAGPTACRSTPSATTRAWPASATTSPSCPASPSAARRTTASASRPASPARTP 460

Query: 430 TWSS 441
            WSS
Sbjct: 461 PWSS 464



EST assemble image


clone accession position
1 LCL073f02_r AV630124 1 352
2 LCL055d09_r AV629256 1 499
3 HCL004g07_r AV639772 8 287
4 MXL081c08_r BP097783 16 392
5 HCL042c12_r AV641913 16 519
6 LCL033a01_r AV627854 23 499
7 CL51f06_r AV395899 77 568




Chlamydomonas reinhardtii
Kazusa DNA Research Institute