Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000640A_C01 KCC000640A_c01
(770 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAO72569.1| eukaryotic initiation factor-like protein [Oryza ... 89 6e-17
sp|Q03387|IF41_WHEAT Eukaryotic initiation factor (iso)4F subuni... 89 1e-16
emb|CAE01628.1| OSJNBa0029H02.9 [Oryza sativa (japonica cultivar... 88 2e-16
pir||A44452 translation initiation factor eIF-4F isozyme form su... 86 7e-16
ref|ZP_00009817.1| COG2885: Outer membrane protein and related p... 85 1e-15
>gb|AAO72569.1| eukaryotic initiation factor-like protein [Oryza sativa (japonica
cultivar-group)]
Length = 792
Score = 89.4 bits (220), Expect = 6e-17
Identities = 85/264 (32%), Positives = 119/264 (44%), Gaps = 30/264 (11%)
Frame = +3
Query: 69 LRPGGNAANP---------FASFGKGLG------FGKGKKAAAPVVEDKPPKKNSERVRY 203
LRPGG P FA+ G G G K P E + ERVRY
Sbjct: 11 LRPGGGGGGPRPGRLFSPAFAAAASGSGDLLRSHVGGASKIGDPNFEVR------ERVRY 64
Query: 204 PKDFLLKFMEKYNSCPSELEQLNLDCVVTGEDR-------------QAQQEVLQKVAEEI 344
+D LL+ E + + L + +D + GED+ Q Q + + E
Sbjct: 65 TRDQLLELREIVDIPEAILIKQEIDIELHGEDQIWGRPESDVQVQTQTQAQPHNRYGET- 123
Query: 345 DDRDWRSRTSVGNYREEREFREPKQREARETAEPRQQQARQAPAPREAAPQQAQQQAQPA 524
D+RDWR+RT + P E + R+ +A A + R+ Q Q
Sbjct: 124 DNRDWRART----------VQPPAANEEKSWDNIREAKAAHASSGRQQEQVNRQDQLNHQ 173
Query: 525 -ASSGPSGDEQNMARIAKAADLGRQAYKVGGTLSAEERAVRSVKGILNKLTPEKFDRLLN 701
AS G + + A++ A + G LS ++R +++VKGILNKLTPEKFD L
Sbjct: 174 FASKAQVGPTPALIK----AEVPWSARR--GNLSEKDRVLKTVKGILNKLTPEKFDLLKG 227
Query: 702 QLLEV-ITTADILQKTIALVFENA 770
QL+E ITTADIL+ I+L+FE A
Sbjct: 228 QLMESGITTADILKDVISLIFEKA 251
>sp|Q03387|IF41_WHEAT Eukaryotic initiation factor (iso)4F subunit p82-34 (eIF-(iso)4F
p82-34) gi|452440|gb|AAA16209.1| initiation factor
(iso)4f p82 subunit
Length = 788
Score = 88.6 bits (218), Expect = 1e-16
Identities = 86/268 (32%), Positives = 127/268 (47%), Gaps = 34/268 (12%)
Frame = +3
Query: 69 LRPGGNAANP---------FASFGKGLG-----FGKGKKAAAPVVEDKPPKKNSERVRYP 206
LRPGG P FA G G G G + + + ++ ERVRY
Sbjct: 10 LRPGGGGGGPRGGRLFAPAFAVAASGSGDFLRPHGGGASGVSRIGDLH--SESRERVRYS 67
Query: 207 KDFLLKFMEKYNSCPSELEQLN--LDCVVTGEDR-------------QAQQEV-LQKVAE 338
+D LL + K ++ +L ++ + G+D+ QAQ +V Q
Sbjct: 68 RDQLLD-LRKITDVTEQILRLQQEIEAELNGDDQSWVRNDSNVQLQTQAQPQVQAQNRFT 126
Query: 339 EIDDRDWRSRTS---VGNYREEREFREPKQREARETAEPRQQQARQAPAPREAAPQQAQQ 509
E D+RDWR+RT +EE+ + ++ + + A RQQ+ Q +++ Q+AQ
Sbjct: 127 ETDNRDWRARTEKPPAPAVQEEKSWDNIREVKEQYNASGRQQE--QFNRQDQSSSQKAQV 184
Query: 510 QAQPAASSGPSGDEQNMARIAKAADLGRQAYKVGGTLSAEERAVRSVKGILNKLTPEKFD 689
PA AD+ A + G LS ++R +++VKGILNKLTPEKFD
Sbjct: 185 GPPPALIK---------------ADVPWSARR--GNLSEKDRVLKTVKGILNKLTPEKFD 227
Query: 690 RLLNQLLEV-ITTADILQKTIALVFENA 770
L QLL+ ITTADIL+ I+L+FE A
Sbjct: 228 LLKGQLLDSGITTADILKDVISLIFEKA 255
>emb|CAE01628.1| OSJNBa0029H02.9 [Oryza sativa (japonica cultivar-group)]
Length = 923
Score = 87.8 bits (216), Expect = 2e-16
Identities = 86/266 (32%), Positives = 121/266 (45%), Gaps = 32/266 (12%)
Frame = +3
Query: 69 LRPGGNAANP---------FASFGKGLG------FGKGKKAAAPVVEDKPPKKNSERVRY 203
LRPGG P FA+ G G G K P E + ERVRY
Sbjct: 11 LRPGGGGGGPRPGRLFSPAFAAAASGSGDLLRSHVGGASKIGDPNFEVR------ERVRY 64
Query: 204 PKDFLLKFMEKYNSCPSELEQLN--LDCVVTGEDR-------------QAQQEVLQKVAE 338
+D LL+ E + P + ++N +D + GED+ Q Q + + E
Sbjct: 65 TRDQLLELREIVD-IPEAILRINQEIDIELHGEDQIWGRPESDVQVQTQTQAQPHNRYGE 123
Query: 339 EIDDRDWRSRTSVGNYREEREFREPKQREARETAEPRQQQARQAPAPREAAPQQAQQQAQ 518
D+RDWR+RT + P E + R+ +A A + R+ Q Q
Sbjct: 124 T-DNRDWRART----------VQPPAANEEKSWDNIREAKAAHASSGRQQEQVNRQDQLN 172
Query: 519 PA-ASSGPSGDEQNMARIAKAADLGRQAYKVGGTLSAEERAVRSVKGILNKLTPEKFDRL 695
AS G + + A++ A + G LS ++R +++VKGILNKLTPEKFD L
Sbjct: 173 HQFASKAQVGPTPALIK----AEVPWSARR--GNLSEKDRVLKTVKGILNKLTPEKFDLL 226
Query: 696 LNQLLEV-ITTADILQKTIALVFENA 770
QL+E ITTADIL+ I+L+FE A
Sbjct: 227 KGQLMESGITTADILKDVISLIFEKA 252
>pir||A44452 translation initiation factor eIF-4F isozyme form subunit p82 -
wheat
Length = 787
Score = 85.9 bits (211), Expect = 7e-16
Identities = 84/265 (31%), Positives = 124/265 (46%), Gaps = 31/265 (11%)
Frame = +3
Query: 69 LRPGGNAANP-----------FASFGKGLGFGKGKKAAAPVVEDKPPKKNSERVRYPKDF 215
LRPGG P A+ G G A ++D + ERVRY +D
Sbjct: 10 LRPGGGGGGPRGGRLFAPAFAVAASGSGDFLRPHGGGAFRALQDWCLHLSHERVRYSRDQ 69
Query: 216 LLKFMEKYNSCPSELEQLN--LDCVVTGEDR-------------QAQQEV-LQKVAEEID 347
LL + K ++ +L ++ + G+D+ QAQ +V Q E D
Sbjct: 70 LLD-LRKITDVTEQILRLQQEIEAELNGDDQSWVRNDSNVQLQTQAQPQVQAQNRFTETD 128
Query: 348 DRDWRSRTS---VGNYREEREFREPKQREARETAEPRQQQARQAPAPREAAPQQAQQQAQ 518
+RDWR+RT +EE+ + ++ + + A RQQ+ Q +++ Q+AQ
Sbjct: 129 NRDWRARTEKPPAPAVQEEKSWDNIREVKEQYNASGRQQE--QFNRQDQSSSQKAQVGPP 186
Query: 519 PAASSGPSGDEQNMARIAKAADLGRQAYKVGGTLSAEERAVRSVKGILNKLTPEKFDRLL 698
PA AD+ A + LS ++R +++VKGILNKLTPEKFD L
Sbjct: 187 PALIK---------------ADVPWSARR--RNLSEKDRVLKTVKGILNKLTPEKFDLLK 229
Query: 699 NQLLEV-ITTADILQKTIALVFENA 770
QLL+ ITTADIL+ I+L+FE A
Sbjct: 230 GQLLDSGITTADILKDVISLIFEKA 254
>ref|ZP_00009817.1| COG2885: Outer membrane protein and related
peptidoglycan-associated (lipo)proteins
[Rhodopseudomonas palustris]
Length = 689
Score = 84.7 bits (208), Expect = 1e-15
Identities = 77/241 (31%), Positives = 95/241 (38%), Gaps = 9/241 (3%)
Frame = -3
Query: 717 SPPAAGSAADRTSPASACSEYPSPSAPP-APQPTGCRPLCRPGGPDRPPWQCAPYSAHHR 541
S P + A + PA A SE + APP P+P P P P PP P+ A
Sbjct: 30 SAPMLLAQAVQGGPAPAPSEEKAKEAPPPGPRPAPAPPKAAPSAPPPPPAAAPPHVAPPP 89
Query: 540 *GR*TPRAAP-----AAAPAEEQPRGARAPGGPAAGGAPPSPWPPAAWAPGTRAPRGSCP 376
PRAAP AAAPA R P P + APP P PP A P AP+ S P
Sbjct: 90 PPPAPPRAAPPPPPPAAAPAPAPKRAEPPPPPPPSHSAPPPP-PPHAAPPPPPAPKPSAP 148
Query: 375 PMCASASRGHQSPPRLSGA-PPAAPGG--PRRSQHSPGSAAPARSGSCCTSP*T*AGSPW 205
P A A R PP + PPA P G P+R PG+ P +P
Sbjct: 149 PTAAPAERPAAPPPAAAPVRPPAPPAGEAPQRRGPPPGAVPPNAVPPNAAAPDAAKPDAA 208
Query: 204 DTGPARCSSWAACPPQPGPQLSCPCQSPDPCRSWQTGWPRCHPGAAAASEISSPSTVMAP 25
P P P + P +P P + + G P P AAA+ + + AP
Sbjct: 209 KQPPGERRGPPPGAPGTPPNATAPGMTPPPGEAPRRGPP---PPPAAANPPPAAAPTPAP 265
Query: 24 S 22
S
Sbjct: 266 S 266
Score = 71.6 bits (174), Expect = 1e-11
Identities = 74/251 (29%), Positives = 84/251 (32%), Gaps = 22/251 (8%)
Frame = -3
Query: 729 PRW*SPPAAGSAADRTSPASACSEYPSPSAPPAPQPTGCRPLCRPGGPDRPPWQCAPYSA 550
PR PP +AA +P A P P + AP P P P P P AP
Sbjct: 95 PRAAPPPPPPAAAPAPAPKRAEPPPPPPPSHSAPPPP--PPHAAPPPPPAPK-PSAP--- 148
Query: 549 HHR*GR*TPRAAPAAAPAEEQPRGARA-PGGPAAGGAPPSPWPPAAWAPGTRAPRGSCPP 373
P AAPA PA P A P P AG AP PP P P + P
Sbjct: 149 --------PTAAPAERPAAPPPAAAPVRPPAPPAGEAPQRRGPPPGAVPPNAVPPNAAAP 200
Query: 372 MCASASRGHQSPPRLSGAPPAAPG----------------GPRRSQHSPGSAAPARSGSC 241
A Q P G PP APG PRR P +AA +
Sbjct: 201 DAAKPDAAKQPPGERRGPPPGAPGTPPNATAPGMTPPPGEAPRRGPPPPPAAANPPPAAA 260
Query: 240 CTSP*T*AGSPWDTGPARCSSWAACP-----PQPGPQLSCPCQSPDPCRSWQTGWPRCHP 76
T + A T PA S A P + GPQ P P P P+ P
Sbjct: 261 PTPAPSAAPQAAPTSPANPSGPAVAPVARPSGERGPQPGAPAGGPPP-------RPQAGP 313
Query: 75 GAAAASEISSP 43
GA A +P
Sbjct: 314 GAPGAGPAVAP 324
Score = 50.1 bits (118), Expect = 4e-05
Identities = 57/220 (25%), Positives = 70/220 (30%), Gaps = 16/220 (7%)
Frame = -3
Query: 729 PRW*SPPAAGSAADRTSPASACSEYPSPSAPPAPQPTGCRPLCRPGGPDRPPWQCAPY-- 556
P+ PP + P +A + P A A QP G R PG P PP AP
Sbjct: 178 PQRRGPPPGAVPPNAVPPNAAAPDAAKPDA--AKQPPGERRGPPPGAPGTPPNATAPGMT 235
Query: 555 ----SAHHR*-------GR*TPRAAPAAAPAEEQPRGARAPGGPAAGGAPPSPWPPAAWA 409
A R P AAP AP+ +P P+ P P
Sbjct: 236 PPPGEAPRRGPPPPPAAANPPPAAAPTPAPSAAPQAAPTSPANPSGPAVAPVARPSGERG 295
Query: 408 PGTRAPRGSCPPMCASASRGHQSPPRLS---GAPPAAPGGPRRSQHSPGSAAPARSGSCC 238
P AP G PP + + P ++ G P P P + P A PA
Sbjct: 296 PQPGAPAGGPPPRPQAGPGAPGAGPAVAPPPGQPQPVPPQPGQPPAGPAVAPPAPPPPAV 355
Query: 237 TSP*T*AGSPWDTGPARCSSWAACPPQPGPQLSCPCQSPD 118
T+P PA A P PG Q P D
Sbjct: 356 TAP---------IPPAPPPPQALTPIAPGAQAPGPRNMSD 386
Score = 49.7 bits (117), Expect = 5e-05
Identities = 55/179 (30%), Positives = 67/179 (36%), Gaps = 24/179 (13%)
Frame = -3
Query: 756 PAQWSSAGCPRW*SPPAAGSAADRTSPASACSEYPSPSAPPAP------------QPTG- 616
P +A P PP P +A + P+ + PAP P+G
Sbjct: 223 PGTPPNATAPGMTPPPGEAPRRGPPPPPAAANPPPAAAPTPAPSAAPQAAPTSPANPSGP 282
Query: 615 -CRPLCRPGGPDRPPWQCAPYSA---HHR*GR*TPRAAPAAAPAEEQPRGA-RAPGGPAA 451
P+ RP G +R P AP + G P A PA AP QP+ PG P A
Sbjct: 283 AVAPVARPSG-ERGPQPGAPAGGPPPRPQAGPGAPGAGPAVAPPPGQPQPVPPQPGQPPA 341
Query: 450 GG--APPSPWPPAAWAPGTRAPRGSCPPMCASASRGHQSPPRLSGAPPAAPG----GPR 292
G APP+P PPA AP PP +PP P APG GPR
Sbjct: 342 GPAVAPPAPPPPAVTAP--------IPP----------APPPPQALTPIAPGAQAPGPR 382
