Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000633A_C01 KCC000633A_c01
(940 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O48650|SUI1_SALBA PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG gi|... 154 2e-36
emb|CAC84489.1| putative translation factor [Pinus pinaster] 154 3e-36
emb|CAD58628.1| SUI1 protein [Coffea arabica] 153 4e-36
sp|P33278|SUI1_ORYSA PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG (GO... 151 1e-35
ref|NP_194443.1| translation initiation factor [Arabidopsis thal... 151 1e-35
>sp|O48650|SUI1_SALBA PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG gi|2852445|dbj|BAA24697.1|
SUI1 homolog [Salix bakko]
Length = 113
Score = 154 bits (390), Expect = 2e-36
Identities = 74/102 (72%), Positives = 84/102 (81%)
Frame = +1
Query: 163 FDPLADSAGADEGNAGEDAVHIRVQQRNGRKSLTTVQGLKEKYDYNKVLKALKKEFCCNG 342
FDP A++ D G +D VH+RVQQRNGRKSLTTVQGLK+ Y YNK+LK LKKEFCCNG
Sbjct: 12 FDPFAEANAEDSGAGTKDYVHVRVQQRNGRKSLTTVQGLKKDYSYNKILKDLKKEFCCNG 71
Query: 343 TVVEDPELGKVIQLQGDQRKNVSDFLLGQKLVKKAQIKIHGF 468
TVV+DPELG+VIQLQGDQRKNVS FL+ +VKK IKIHGF
Sbjct: 72 TVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKENIKIHGF 113
>emb|CAC84489.1| putative translation factor [Pinus pinaster]
Length = 113
Score = 154 bits (388), Expect = 3e-36
Identities = 74/116 (63%), Positives = 91/116 (77%)
Frame = +1
Query: 121 DVVLPGDISNLGVGFDPLADSAGADEGNAGEDAVHIRVQQRNGRKSLTTVQGLKEKYDYN 300
DV +PG +DP AD+ D G ++ VH+R+QQRNGRKSLTTVQGL++++ YN
Sbjct: 5 DVQIPG-------AYDPFADANAEDSGAGSKEYVHVRIQQRNGRKSLTTVQGLRKEFSYN 57
Query: 301 KVLKALKKEFCCNGTVVEDPELGKVIQLQGDQRKNVSDFLLGQKLVKKAQIKIHGF 468
K+LK LKKEFCCNGTVV+DPELG+VIQLQGDQRKNVS+FL+ +VKK IKIHGF
Sbjct: 58 KILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKDNIKIHGF 113
>emb|CAD58628.1| SUI1 protein [Coffea arabica]
Length = 113
Score = 153 bits (387), Expect = 4e-36
Identities = 72/102 (70%), Positives = 86/102 (83%)
Frame = +1
Query: 163 FDPLADSAGADEGNAGEDAVHIRVQQRNGRKSLTTVQGLKEKYDYNKVLKALKKEFCCNG 342
FDP A++ + G+ +D VHIR+QQRNGRKSLTTVQGLK+++ YNK+LK LKKEFCCNG
Sbjct: 12 FDPFAEANADNSGDGSKDYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNG 71
Query: 343 TVVEDPELGKVIQLQGDQRKNVSDFLLGQKLVKKAQIKIHGF 468
TVV+DPELG+VIQLQGDQRKNVS FL+ +VKK IKIHGF
Sbjct: 72 TVVQDPELGQVIQLQGDQRKNVSSFLVQAGIVKKEHIKIHGF 113
>sp|P33278|SUI1_ORYSA PROTEIN TRANSLATION FACTOR SUI1 HOMOLOG (GOS2 PROTEIN)
gi|100682|pir||S21636 GOS2 protein - rice
gi|20238|emb|CAA36190.1| GOS2 [Oryza sativa]
gi|3789950|gb|AAC67556.1| translation initiation factor
[Oryza sativa] gi|14194275|gb|AAK56324.1|AF380357_1
translational initiation factor eIF1 [Porteresia
coarctata] gi|27261027|dbj|BAC45143.1| translational
initiation factor eIF1 [Oryza sativa (japonica
cultivar-group)]
Length = 115
Score = 151 bits (382), Expect = 1e-35
Identities = 73/104 (70%), Positives = 87/104 (83%), Gaps = 2/104 (1%)
Frame = +1
Query: 163 FDPLADSAGADEGNAG--EDAVHIRVQQRNGRKSLTTVQGLKEKYDYNKVLKALKKEFCC 336
FDP A++ D G A +D VH+R+QQRNGRKSLTTVQGLK+++ YNK+LK LKKEFCC
Sbjct: 12 FDPFAEANAGDSGAAAGSKDYVHVRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCC 71
Query: 337 NGTVVEDPELGKVIQLQGDQRKNVSDFLLGQKLVKKAQIKIHGF 468
NGTVV+DPELG+VIQLQGDQRKNVS+FL+ +VKK IKIHGF
Sbjct: 72 NGTVVQDPELGQVIQLQGDQRKNVSNFLVQAGIVKKEHIKIHGF 115
>ref|NP_194443.1| translation initiation factor [Arabidopsis thaliana]
gi|2507421|sp|P41568|SU11_ARATH Protein translation
factor SUI1 homolog 1 gi|7488392|pir||T06043 translation
initiation factor eIF-2A - Arabidopsis thaliana
gi|1800277|gb|AAB68033.1| translation initiation factor
[Arabidopsis thaliana] gi|4490709|emb|CAB38843.1|
translation initiation factor [Arabidopsis thaliana]
gi|7269566|emb|CAB79568.1| translation initiation factor
[Arabidopsis thaliana] gi|14335110|gb|AAK59834.1|
AT4g27130/T24A18_80 [Arabidopsis thaliana]
gi|16974517|gb|AAL31168.1| AT4g27130/T24A18_80
[Arabidopsis thaliana] gi|21593860|gb|AAM65827.1|
translation initiation factor [Arabidopsis thaliana]
Length = 113
Score = 151 bits (382), Expect = 1e-35
Identities = 75/108 (69%), Positives = 85/108 (78%)
Frame = +1
Query: 145 SNLGVGFDPLADSAGADEGNAGEDAVHIRVQQRNGRKSLTTVQGLKEKYDYNKVLKALKK 324
S + FDP AD+ D G ++ VHIRVQQRNGRKSLTTVQGLK++Y Y K+LK LKK
Sbjct: 6 SQVPTAFDPFADANAEDSGAGTKEYVHIRVQQRNGRKSLTTVQGLKKEYSYTKILKDLKK 65
Query: 325 EFCCNGTVVEDPELGKVIQLQGDQRKNVSDFLLGQKLVKKAQIKIHGF 468
EFCCNGTVV+D ELG+VIQLQGDQRKNVS FL+ LVKK IKIHGF
Sbjct: 66 EFCCNGTVVQDSELGQVIQLQGDQRKNVSTFLVQAGLVKKDNIKIHGF 113
