Nr search
BLASTX 2.2.2 [Dec-14-2001]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= KCC000627A_C01 KCC000627A_c01
(542 letters)
Database: nr
1,537,769 sequences; 498,525,298 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAD02267.1| ClpC protease [Spinacia oleracea] 293 1e-78
emb|CAE05151.1| OSJNBa0039C07.7 [Oryza sativa (japonica cultivar... 293 1e-78
sp|P31542|CLAB_LYCES ATP-dependent clp protease ATP-binding subu... 293 1e-78
sp|P31541|CLAA_LYCES ATP-dependent clp protease ATP-binding subu... 291 5e-78
ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit ... 289 2e-77
>gb|AAD02267.1| ClpC protease [Spinacia oleracea]
Length = 891
Score = 293 bits (750), Expect = 1e-78
Identities = 150/179 (83%), Positives = 162/179 (89%)
Frame = +2
Query: 2 GRGSGFVAVEIPFTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLETL 181
GRGSGFVAVEIPFTPRAKRVLE+SLEEARQLGHNYIG+EH+LLGLLREGEGVAARVLE L
Sbjct: 157 GRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENL 216
Query: 182 GADPAKIRTQVIRMVGESQEPVGAGVGGSQQGGSNKTPTLQEYGTNLTQQAAEGKLDPVV 361
GADP+ IRTQVIRMVGE+ E VGAGVGG G NK PTL+EYGTNLT+ A EGKLDPVV
Sbjct: 217 GADPSNIRTQVIRMVGENTEAVGAGVGGGTTG--NKMPTLEEYGTNLTKLAEEGKLDPVV 274
Query: 362 GRKKQIERVIQILGRRTKNNPCLIGEPGVGKRAVAEGLAQKIASGDVTEDIEGKQVITL 538
GR+ QIERV QILGRRTKNNPCLIGEPGVGK A+AEGLAQ+IA+GDV E IEGK+VITL
Sbjct: 275 GRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIATGDVPETIEGKKVITL 333
Score = 69.7 bits (169), Expect = 2e-11
Identities = 31/64 (48%), Positives = 50/64 (77%)
Frame = +2
Query: 38 FTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLETLGADPAKIRTQVI 217
FT +A +V+ ++ EEAR+LGHN++GTE ILLGL+ EG G+AA+VL+++G + R +V
Sbjct: 94 FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVE 153
Query: 218 RMVG 229
+++G
Sbjct: 154 KIIG 157
>emb|CAE05151.1| OSJNBa0039C07.7 [Oryza sativa (japonica cultivar-group)]
Length = 888
Score = 293 bits (750), Expect = 1e-78
Identities = 150/180 (83%), Positives = 162/180 (89%)
Frame = +2
Query: 2 GRGSGFVAVEIPFTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLETL 181
GRGSGFVAVEIPFTPRAKRVLE+SLEEARQLGHNYIG+EH+LLGLLREGEGVAARVLE+L
Sbjct: 124 GRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLESL 183
Query: 182 GADPAKIRTQVIRMVGESQEPVGAGVGGSQQGGSNKTPTLQEYGTNLTQQAAEGKLDPVV 361
GADP IRTQVIRMVGES E VGAGVGG G K PTL+EYGTNLT+ A EGKLDPVV
Sbjct: 184 GADPNNIRTQVIRMVGESTEAVGAGVGGGSSG--QKMPTLEEYGTNLTKLAEEGKLDPVV 241
Query: 362 GRKKQIERVIQILGRRTKNNPCLIGEPGVGKRAVAEGLAQKIASGDVTEDIEGKQVITLD 541
GR+ QIERV QILGRRTKNNPCLIGEPGVGK A+AEGLAQ+I++GDV E IEGK+VITLD
Sbjct: 242 GRQDQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRISNGDVPETIEGKKVITLD 301
Score = 69.7 bits (169), Expect = 2e-11
Identities = 31/64 (48%), Positives = 50/64 (77%)
Frame = +2
Query: 38 FTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLETLGADPAKIRTQVI 217
FT +A +V+ ++ EEAR+LGHN++GTE ILLGL+ EG G+AA+VL+++G + R +V
Sbjct: 61 FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVE 120
Query: 218 RMVG 229
+++G
Sbjct: 121 KIIG 124
>sp|P31542|CLAB_LYCES ATP-dependent clp protease ATP-binding subunit clpA homolog CD4B,
chloroplast precursor gi|100190|pir||B35905
endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cd4B,
chloroplast [similarity] - tomato
gi|170435|gb|AAA34161.1| ATP-dependent protease (CD4B)
Length = 923
Score = 293 bits (749), Expect = 1e-78
Identities = 150/180 (83%), Positives = 161/180 (89%)
Frame = +2
Query: 2 GRGSGFVAVEIPFTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLETL 181
GRGSGFVAVEIPFTPRAKRVLE+SLEEARQLGHNYIG+EH+LLGLLREGEGVAARVLE L
Sbjct: 158 GRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENL 217
Query: 182 GADPAKIRTQVIRMVGESQEPVGAGVGGSQQGGSNKTPTLQEYGTNLTQQAAEGKLDPVV 361
GADP+ IRTQVIRMVGES E VGA VGG G K PTL+EYGTNLT+ A EGKLDPVV
Sbjct: 218 GADPSNIRTQVIRMVGESNEAVGASVGGGTSG--QKMPTLEEYGTNLTKLAEEGKLDPVV 275
Query: 362 GRKKQIERVIQILGRRTKNNPCLIGEPGVGKRAVAEGLAQKIASGDVTEDIEGKQVITLD 541
GR+ QIERV QILGRRTKNNPCLIGEPGVGK A+AEGLAQ+IA+GDV E IEGK+VITLD
Sbjct: 276 GRQPQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 335
Score = 70.5 bits (171), Expect = 1e-11
Identities = 36/77 (46%), Positives = 56/77 (71%), Gaps = 2/77 (2%)
Frame = +2
Query: 5 RGSGFV--AVEIPFTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLET 178
RG FV A+ FT +A +V+ ++ EEAR+LGHN++GTE ILLGL+ EG G+AA+VL++
Sbjct: 82 RGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKS 141
Query: 179 LGADPAKIRTQVIRMVG 229
+G + R +V +++G
Sbjct: 142 MGINLKDARVEVEKIIG 158
>sp|P31541|CLAA_LYCES ATP-dependent clp protease ATP-binding subunit clpA homolog CD4A,
chloroplast precursor gi|100189|pir||A35905
endopeptidase Clp (EC 3.4.21.-) ATP-binding chain cd4A,
chloroplast [similarity] - tomato
gi|170433|gb|AAA34160.1| ATP-dependent protease (CD4A)
Length = 926
Score = 291 bits (744), Expect = 5e-78
Identities = 149/180 (82%), Positives = 160/180 (88%)
Frame = +2
Query: 2 GRGSGFVAVEIPFTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLETL 181
GRGSGF+AVEIPFTPRAKRVLE+SLEEARQLGHNYIG+EH+LLGLLREGEGVAARVLE L
Sbjct: 160 GRGSGFIAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENL 219
Query: 182 GADPAKIRTQVIRMVGESQEPVGAGVGGSQQGGSNKTPTLQEYGTNLTQQAAEGKLDPVV 361
GADP IRTQVIRMVGES E VGA VGG G K PTL+EYGTNLT+ A EGKLDPVV
Sbjct: 220 GADPTNIRTQVIRMVGESSEAVGASVGGGTSG--LKMPTLEEYGTNLTKLAEEGKLDPVV 277
Query: 362 GRKKQIERVIQILGRRTKNNPCLIGEPGVGKRAVAEGLAQKIASGDVTEDIEGKQVITLD 541
GR+ QIERV QILGRRTKNNPCLIGEPGVGK A+AEGLAQ+IA+GDV E IEGK+VITLD
Sbjct: 278 GRQAQIERVTQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIANGDVPETIEGKKVITLD 337
Score = 70.5 bits (171), Expect = 1e-11
Identities = 36/77 (46%), Positives = 56/77 (71%), Gaps = 2/77 (2%)
Frame = +2
Query: 5 RGSGFV--AVEIPFTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLET 178
RG FV A+ FT +A +V+ ++ EEAR+LGHN++GTE ILLGL+ EG G+AA+VL++
Sbjct: 84 RGCRFVPKAMFERFTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKS 143
Query: 179 LGADPAKIRTQVIRMVG 229
+G + R +V +++G
Sbjct: 144 MGINLKDARVEVEKIIG 160
>ref|NP_568746.1| ATP-dependent Clp protease ATP-binding subunit (ClpC1) [Arabidopsis
thaliana] gi|9758239|dbj|BAB08738.1| ATP-dependent Clp
protease, ATP-binding subunit [Arabidopsis thaliana]
gi|20856956|gb|AAM26692.1| AT5g50920/K3K7_7 [Arabidopsis
thaliana]
Length = 929
Score = 289 bits (739), Expect = 2e-77
Identities = 150/180 (83%), Positives = 162/180 (89%)
Frame = +2
Query: 2 GRGSGFVAVEIPFTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLETL 181
GRGSGFVAVEIPFTPRAKRVLE+SLEEARQLGHNYIG+EH+LLGLLREGEGVAARVLE L
Sbjct: 161 GRGSGFVAVEIPFTPRAKRVLELSLEEARQLGHNYIGSEHLLLGLLREGEGVAARVLENL 220
Query: 182 GADPAKIRTQVIRMVGESQEPVGAGVGGSQQGGSNKTPTLQEYGTNLTQQAAEGKLDPVV 361
GADP+ IRTQVIRMVGE+ E V A VGG SNK PTL+EYGTNLT+ A EGKLDPVV
Sbjct: 221 GADPSNIRTQVIRMVGENNE-VTANVGGGSS--SNKMPTLEEYGTNLTKLAEEGKLDPVV 277
Query: 362 GRKKQIERVIQILGRRTKNNPCLIGEPGVGKRAVAEGLAQKIASGDVTEDIEGKQVITLD 541
GR+ QIERV+QILGRRTKNNPCLIGEPGVGK A+AEGLAQ+IASGDV E IEGK+VITLD
Sbjct: 278 GRQPQIERVVQILGRRTKNNPCLIGEPGVGKTAIAEGLAQRIASGDVPETIEGKKVITLD 337
Score = 69.7 bits (169), Expect = 2e-11
Identities = 31/64 (48%), Positives = 50/64 (77%)
Frame = +2
Query: 38 FTPRAKRVLEMSLEEARQLGHNYIGTEHILLGLLREGEGVAARVLETLGADPAKIRTQVI 217
FT +A +V+ ++ EEAR+LGHN++GTE ILLGL+ EG G+AA+VL+++G + R +V
Sbjct: 98 FTEKAIKVIMLAQEEARRLGHNFVGTEQILLGLIGEGTGIAAKVLKSMGINLKDARVEVE 157
Query: 218 RMVG 229
+++G
Sbjct: 158 KIIG 161
